RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 FAM236DA0A1B0GTK5 79 aa10.03□□□□□ -0.8
APP-215ENST00000474136 FAM236CP0DP71 79 aa10.03□□□□□ -0.8
APP-215ENST00000474136 CYP4F30PQ9H0H9 118 aa10.02□□□□□ -0.81
APP-215ENST00000474136 KRTAP19-6Q3LI70 58 aa10.01□□□□□ -0.81
APP-215ENST00000474136 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
APP-215ENST00000474136 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
APP-215ENST00000474136 KRTAP6-3Q3LI67 103 aa9.93□□□□□ -0.82
APP-215ENST00000474136 MPLKIPQ8TAP9 179 aa9.91□□□□□ -0.82
APP-215ENST00000474136 HRES1P13985 223 aa9.89□□□□□ -0.83
APP-215ENST00000474136 RBM12B-AS1Q9P1G2 102 aa9.89□□□□□ -0.83
APP-215ENST00000474136 SNURFQ9Y675 71 aa9.89□□□□□ -0.83
APP-215ENST00000474136 NDUFC1O43677 76 aa9.87□□□□□ -0.83
APP-215ENST00000474136 NEBP20929 6669 aa9.82□□□□□ -0.84
APP-215ENST00000474136 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
APP-215ENST00000474136 C4orf26Q17RF5 130 aa9.8□□□□□ -0.84
APP-215ENST00000474136 PCP4P48539 62 aa9.75□□□□□ -0.85
APP-215ENST00000474136 SPANXA2-OT1Q8N9U9 137 aa9.75□□□□□ -0.85
APP-215ENST00000474136 A8MUN3 132 aa9.73□□□□□ -0.85
APP-215ENST00000474136 H7BZZ5 65 aa9.71□□□□□ -0.86
APP-215ENST00000474136 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
APP-215ENST00000474136 CYSTM1Q9H1C7 97 aa9.66□□□□□ -0.86
APP-215ENST00000474136 DMAC1Q96GE9 116 aa9.63□□□□□ -0.87
APP-215ENST00000474136 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
APP-215ENST00000474136 ACYP2P14621 99 aa9.6□□□□□ -0.87
APP-215ENST00000474136 MUC12Q9UKN1 5478 aa9.6□□□□□ -0.87
APP-215ENST00000474136 ATP5EP56381 51 aaPredicted RBP9.58□□□□□ -0.88
APP-215ENST00000474136 TMEM258P61165 79 aa9.57□□□□□ -0.88
APP-215ENST00000474136 KRTAP20-1Q3LI63 56 aa9.52□□□□□ -0.89
APP-215ENST00000474136 S4R3F8 94 aa9.49□□□□□ -0.89
APP-215ENST00000474136 CHKB-CPT1BH3BT56 60 aa9.42□□□□□ -0.9
APP-215ENST00000474136 LCA10Q71F78 164 aa9.4□□□□□ -0.9
APP-215ENST00000474136 SPTSSBQ8NFR3 76 aa9.39□□□□□ -0.91
APP-215ENST00000474136 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
APP-215ENST00000474136 COA5Q86WW8 74 aa9.37□□□□□ -0.91
APP-215ENST00000474136 A6NN06 94 aa9.31□□□□□ -0.92
APP-215ENST00000474136 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
APP-215ENST00000474136 SERP1Q9Y6X1 66 aa9.27□□□□□ -0.93
APP-215ENST00000474136 MDN1Q9NU22 5596 aa9.25□□□□□ -0.93
APP-215ENST00000474136 KMT2DO14686 5537 aa9.22□□□□□ -0.93
APP-215ENST00000474136 KRTAP5-9P26371 169 aa9.21□□□□□ -0.94
APP-215ENST00000474136 MT1BP07438 61 aa9.2□□□□□ -0.94
APP-215ENST00000474136 RPS28P62857 69 aaKnown RBP9.15□□□□□ -0.94
APP-215ENST00000474136 H0YAA0 97 aa9.14□□□□□ -0.95
APP-215ENST00000474136 KRTAP10-5P60370 271 aa9.09□□□□□ -0.95
APP-215ENST00000474136 Q5VV11 94 aa9.09□□□□□ -0.95
APP-215ENST00000474136 KRTAP2-3P0C7H8 128 aa9.07□□□□□ -0.96
APP-215ENST00000474136 KRTAP2-4Q9BYR9 128 aa9.07□□□□□ -0.96
APP-215ENST00000474136 SEC61GP60059 68 aa9.05□□□□□ -0.96
APP-215ENST00000474136 KRTAP19-8Q3LI54 63 aa9.05□□□□□ -0.96
APP-215ENST00000474136 SMIM26A0A096LP01 95 aa9□□□□□ -0.97
APP-215ENST00000474136 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
APP-215ENST00000474136 SPRR2GQ9BYE4 73 aa8.98□□□□□ -0.97
APP-215ENST00000474136 V9GYY9 64 aa8.98□□□□□ -0.97
APP-215ENST00000474136 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
APP-215ENST00000474136 A0A1B0GU69 56 aa8.93□□□□□ -0.98
APP-215ENST00000474136 PRR15LQ9BU68 103 aa8.93□□□□□ -0.98
APP-215ENST00000474136 CRIPTQ9P021 101 aa8.9□□□□□ -0.98
APP-215ENST00000474136 Q1T7F1 81 aa8.89□□□□□ -0.99
APP-215ENST00000474136 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
APP-215ENST00000474136 P0C880 135 aa8.84□□□□□ -0.99
APP-215ENST00000474136 SPRR2EP22531 72 aa8.83□□□□□ -1
APP-215ENST00000474136 SPRR2BP35325 72 aa8.83□□□□□ -1
APP-215ENST00000474136 SPRR2AP35326 72 aa8.83□□□□□ -1
APP-215ENST00000474136 SPRR2FQ96RM1 72 aa8.8□□□□□ -1
APP-215ENST00000474136 M0QZ58 72 aa8.76□□□□□ -1.01
APP-215ENST00000474136 R4GN34 69 aa8.76□□□□□ -1.01
APP-215ENST00000474136 A0A1B0GU33 70 aa8.75□□□□□ -1.01
APP-215ENST00000474136 KRTAP2-2Q9BYT5 123 aa8.75□□□□□ -1.01
APP-215ENST00000474136 KRTAP2-1Q9BYU5 128 aa8.75□□□□□ -1.01
APP-215ENST00000474136 PSPHP1O15172 72 aa8.67□□□□□ -1.02
APP-215ENST00000474136 UQCR11O14957 56 aa8.63□□□□□ -1.03
APP-215ENST00000474136 LCE1AQ5T7P2 110 aa8.63□□□□□ -1.03
APP-215ENST00000474136 SPRR2DP22532 72 aa8.54□□□□□ -1.04
APP-215ENST00000474136 KRTAP8-1Q8IUC2 63 aa8.54□□□□□ -1.04
APP-215ENST00000474136 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
APP-215ENST00000474136 SPATA8Q6RVD6 105 aa8.52□□□□□ -1.05
APP-215ENST00000474136 LINC01554Q52M75 96 aa8.5□□□□□ -1.05
APP-215ENST00000474136 A6NED7 52 aa8.48□□□□□ -1.05
APP-215ENST00000474136 MT1XP80297 61 aa8.46□□□□□ -1.06
APP-215ENST00000474136 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.06
APP-215ENST00000474136 GPR98Q8WXG9 6306 aa8.42□□□□□ -1.06
APP-215ENST00000474136 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
APP-215ENST00000474136 A0A0D9SG42 100 aa8.39□□□□□ -1.07
APP-215ENST00000474136 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
APP-215ENST00000474136 LCE3BQ5TA77 95 aa8.36□□□□□ -1.07
APP-215ENST00000474136 KRTAP4-8A0A0G2JLE6 195 aa8.34□□□□□ -1.07
APP-215ENST00000474136 KRTAP4-8Q9BYQ9 185 aa8.34□□□□□ -1.07
APP-215ENST00000474136 A8MU10 97 aa8.32□□□□□ -1.08
APP-215ENST00000474136 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
APP-215ENST00000474136 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
APP-215ENST00000474136 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
APP-215ENST00000474136 K7ERS5 55 aa8.26□□□□□ -1.09
APP-215ENST00000474136 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
APP-215ENST00000474136 CAMK2N1Q7Z7J9 78 aa8.18□□□□□ -1.1
APP-215ENST00000474136 DSTQ03001 7570 aaKnown RBP8.14□□□□□ -1.11
APP-215ENST00000474136 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
APP-215ENST00000474136 KRTAP10-7P60409 375 aaPredicted RBP8.08□□□□□ -1.12
APP-215ENST00000474136 KRTAP4-9Q9BYQ8 210 aa8.01□□□□□ -1.13
APP-215ENST00000474136 KRTAP10-12P60413 245 aa8□□□□□ -1.13
APP-215ENST00000474136 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms