RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 A8MUN3 132 aa5.88□□□□□ -1.47
DDX56-209ENST00000473924 NDUFC1O43677 76 aa5.82□□□□□ -1.48
DDX56-209ENST00000473924 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
DDX56-209ENST00000473924 SERP2Q8N6R1 65 aa5.81□□□□□ -1.48
DDX56-209ENST00000473924 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
DDX56-209ENST00000473924 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
DDX56-209ENST00000473924 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
DDX56-209ENST00000473924 C20orf197Q8N268 126 aa5.77□□□□□ -1.49
DDX56-209ENST00000473924 LCE2BO14633 110 aa5.73□□□□□ -1.49
DDX56-209ENST00000473924 ACYP2P14621 99 aa5.72□□□□□ -1.49
DDX56-209ENST00000473924 COX7CP15954 63 aa5.69□□□□□ -1.5
DDX56-209ENST00000473924 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
DDX56-209ENST00000473924 H0YAA0 97 aa5.66□□□□□ -1.5
DDX56-209ENST00000473924 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
DDX56-209ENST00000473924 CHKB-CPT1BH3BT56 60 aa5.64□□□□□ -1.51
DDX56-209ENST00000473924 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
DDX56-209ENST00000473924 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
DDX56-209ENST00000473924 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
DDX56-209ENST00000473924 SPTSSBQ8NFR3 76 aa5.62□□□□□ -1.51
DDX56-209ENST00000473924 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
DDX56-209ENST00000473924 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
DDX56-209ENST00000473924 USH2AO75445 5202 aa5.61□□□□□ -1.51
DDX56-209ENST00000473924 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
DDX56-209ENST00000473924 H7BZZ5 65 aa5.54□□□□□ -1.52
DDX56-209ENST00000473924 Q5VV11 94 aa5.54□□□□□ -1.52
DDX56-209ENST00000473924 CYSTM1Q9H1C7 97 aa5.53□□□□□ -1.52
DDX56-209ENST00000473924 P0C880 135 aa5.52□□□□□ -1.53
DDX56-209ENST00000473924 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
DDX56-209ENST00000473924 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
DDX56-209ENST00000473924 COA5Q86WW8 74 aa5.5□□□□□ -1.53
DDX56-209ENST00000473924 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
DDX56-209ENST00000473924 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
DDX56-209ENST00000473924 R4GN34 69 aa5.49□□□□□ -1.53
DDX56-209ENST00000473924 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
DDX56-209ENST00000473924 MT1BP07438 61 aa5.47□□□□□ -1.53
DDX56-209ENST00000473924 M0QZ58 72 aa5.45□□□□□ -1.54
DDX56-209ENST00000473924 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
DDX56-209ENST00000473924 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
DDX56-209ENST00000473924 A6NN06 94 aa5.37□□□□□ -1.55
DDX56-209ENST00000473924 ATP5EP56381 51 aaPredicted RBP5.37□□□□□ -1.55
DDX56-209ENST00000473924 SEC61GP60059 68 aa5.36□□□□□ -1.55
DDX56-209ENST00000473924 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
DDX56-209ENST00000473924 SERP1Q9Y6X1 66 aa5.34□□□□□ -1.55
DDX56-209ENST00000473924 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
DDX56-209ENST00000473924 TMEM258P61165 79 aa5.31□□□□□ -1.56
DDX56-209ENST00000473924 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
DDX56-209ENST00000473924 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
DDX56-209ENST00000473924 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
DDX56-209ENST00000473924 A0A1B0GU69 56 aa5.24□□□□□ -1.57
DDX56-209ENST00000473924 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
DDX56-209ENST00000473924 A0A1B0GU33 70 aa5.22□□□□□ -1.57
DDX56-209ENST00000473924 MT1XP80297 61 aa5.19□□□□□ -1.58
DDX56-209ENST00000473924 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
DDX56-209ENST00000473924 PRR15LQ9BU68 103 aa5.17□□□□□ -1.58
DDX56-209ENST00000473924 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
DDX56-209ENST00000473924 A0A0D9SG42 100 aa5.15□□□□□ -1.59
DDX56-209ENST00000473924 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
DDX56-209ENST00000473924 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
DDX56-209ENST00000473924 SMIM26A0A096LP01 95 aa5.08□□□□□ -1.6
DDX56-209ENST00000473924 PCP4P48539 62 aa5.08□□□□□ -1.6
DDX56-209ENST00000473924 SPINT4Q6UDR6 99 aa5.07□□□□□ -1.6
DDX56-209ENST00000473924 A8MU10 97 aa5.02□□□□□ -1.61
DDX56-209ENST00000473924 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
DDX56-209ENST00000473924 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
DDX56-209ENST00000473924 V9GYY9 64 aa4.99□□□□□ -1.61
DDX56-209ENST00000473924 UQCR11O14957 56 aa4.98□□□□□ -1.61
DDX56-209ENST00000473924 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
DDX56-209ENST00000473924 NEBP20929 6669 aa4.96□□□□□ -1.62
DDX56-209ENST00000473924 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
DDX56-209ENST00000473924 Q1T7F1 81 aa4.94□□□□□ -1.62
DDX56-209ENST00000473924 KRTAP8-1Q8IUC2 63 aa4.94□□□□□ -1.62
DDX56-209ENST00000473924 PSPHP1O15172 72 aa4.93□□□□□ -1.62
DDX56-209ENST00000473924 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
DDX56-209ENST00000473924 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
DDX56-209ENST00000473924 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
DDX56-209ENST00000473924 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
DDX56-209ENST00000473924 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
DDX56-209ENST00000473924 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
DDX56-209ENST00000473924 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
DDX56-209ENST00000473924 KMT2DO14686 5537 aa4.87□□□□□ -1.63
DDX56-209ENST00000473924 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
DDX56-209ENST00000473924 A6NED7 52 aa4.79□□□□□ -1.64
DDX56-209ENST00000473924 K7ERS5 55 aa4.79□□□□□ -1.64
DDX56-209ENST00000473924 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
DDX56-209ENST00000473924 TNP1P09430 55 aa4.75□□□□□ -1.65
DDX56-209ENST00000473924 SPRR2EP22531 72 aa4.75□□□□□ -1.65
DDX56-209ENST00000473924 SPRR2BP35325 72 aa4.75□□□□□ -1.65
DDX56-209ENST00000473924 SPRR2AP35326 72 aa4.75□□□□□ -1.65
DDX56-209ENST00000473924 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
DDX56-209ENST00000473924 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
DDX56-209ENST00000473924 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
DDX56-209ENST00000473924 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
DDX56-209ENST00000473924 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
DDX56-209ENST00000473924 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
DDX56-209ENST00000473924 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
DDX56-209ENST00000473924 MT1EP04732 61 aa4.59□□□□□ -1.67
DDX56-209ENST00000473924 SPRR2DP22532 72 aa4.59□□□□□ -1.67
DDX56-209ENST00000473924 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
DDX56-209ENST00000473924 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
DDX56-209ENST00000473924 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms