RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 ATOX1O00244 68 aa6.3□□□□□ -1.4
SEMA3F-208ENST00000470737 KRTAP20-1Q3LI63 56 aa6.3□□□□□ -1.4
SEMA3F-208ENST00000470737 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
SEMA3F-208ENST00000470737 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
SEMA3F-208ENST00000470737 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
SEMA3F-208ENST00000470737 MT1BP07438 61 aa6.27□□□□□ -1.41
SEMA3F-208ENST00000470737 C1orf64Q8NEQ6 169 aa6.27□□□□□ -1.41
SEMA3F-208ENST00000470737 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
SEMA3F-208ENST00000470737 S4R3F8 94 aa6.24□□□□□ -1.41
SEMA3F-208ENST00000470737 H0Y9P7 68 aa6.23□□□□□ -1.41
SEMA3F-208ENST00000470737 CSAG1Q6PB30 78 aa6.23□□□□□ -1.41
SEMA3F-208ENST00000470737 SMIM20Q8N5G0 67 aa6.23□□□□□ -1.41
SEMA3F-208ENST00000470737 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
SEMA3F-208ENST00000470737 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
SEMA3F-208ENST00000470737 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
SEMA3F-208ENST00000470737 MP68P56378 58 aa6.18□□□□□ -1.42
SEMA3F-208ENST00000470737 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
SEMA3F-208ENST00000470737 H3BPC8 53 aa6.17□□□□□ -1.42
SEMA3F-208ENST00000470737 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
SEMA3F-208ENST00000470737 LCA10Q71F78 164 aa6.16□□□□□ -1.42
SEMA3F-208ENST00000470737 KLKP1Q107X0 134 aa6.15□□□□□ -1.42
SEMA3F-208ENST00000470737 LINC00208Q96KT6 92 aa6.15□□□□□ -1.42
SEMA3F-208ENST00000470737 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
SEMA3F-208ENST00000470737 A8MUN3 132 aa6.14□□□□□ -1.43
SEMA3F-208ENST00000470737 KMT2DO14686 5537 aa6.14□□□□□ -1.43
SEMA3F-208ENST00000470737 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
SEMA3F-208ENST00000470737 SERP2Q8N6R1 65 aa6.1□□□□□ -1.43
SEMA3F-208ENST00000470737 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
SEMA3F-208ENST00000470737 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
SEMA3F-208ENST00000470737 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
SEMA3F-208ENST00000470737 NDUFC1O43677 76 aa6.02□□□□□ -1.45
SEMA3F-208ENST00000470737 COX7CP15954 63 aa6.02□□□□□ -1.45
SEMA3F-208ENST00000470737 H0YAA0 97 aa6.01□□□□□ -1.45
SEMA3F-208ENST00000470737 ANAPC13Q9BS18 74 aa6□□□□□ -1.45
SEMA3F-208ENST00000470737 C20orf197Q8N268 126 aa5.99□□□□□ -1.45
SEMA3F-208ENST00000470737 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
SEMA3F-208ENST00000470737 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
SEMA3F-208ENST00000470737 SNURFQ9Y675 71 aa5.96□□□□□ -1.46
SEMA3F-208ENST00000470737 SPRR2EP22531 72 aa5.95□□□□□ -1.46
SEMA3F-208ENST00000470737 SPRR2BP35325 72 aa5.95□□□□□ -1.46
SEMA3F-208ENST00000470737 SPRR2AP35326 72 aa5.95□□□□□ -1.46
SEMA3F-208ENST00000470737 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
SEMA3F-208ENST00000470737 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
SEMA3F-208ENST00000470737 ACYP2P14621 99 aa5.87□□□□□ -1.47
SEMA3F-208ENST00000470737 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
SEMA3F-208ENST00000470737 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
SEMA3F-208ENST00000470737 PCP4P48539 62 aa5.84□□□□□ -1.47
SEMA3F-208ENST00000470737 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
SEMA3F-208ENST00000470737 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
SEMA3F-208ENST00000470737 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
SEMA3F-208ENST00000470737 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
SEMA3F-208ENST00000470737 H7BZZ5 65 aa5.82□□□□□ -1.48
SEMA3F-208ENST00000470737 MT1XP80297 61 aa5.8□□□□□ -1.48
SEMA3F-208ENST00000470737 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
SEMA3F-208ENST00000470737 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
SEMA3F-208ENST00000470737 SPTSSBQ8NFR3 76 aa5.78□□□□□ -1.48
SEMA3F-208ENST00000470737 SPRR2DP22532 72 aa5.76□□□□□ -1.49
SEMA3F-208ENST00000470737 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
SEMA3F-208ENST00000470737 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
SEMA3F-208ENST00000470737 P0C880 135 aa5.72□□□□□ -1.49
SEMA3F-208ENST00000470737 ATP5EP56381 51 aaPredicted RBP5.72□□□□□ -1.49
SEMA3F-208ENST00000470737 R4GN34 69 aa5.72□□□□□ -1.49
SEMA3F-208ENST00000470737 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
SEMA3F-208ENST00000470737 TMEM258P61165 79 aa5.69□□□□□ -1.5
SEMA3F-208ENST00000470737 COA5Q86WW8 74 aa5.66□□□□□ -1.5
SEMA3F-208ENST00000470737 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
SEMA3F-208ENST00000470737 M0QZ58 72 aa5.65□□□□□ -1.5
SEMA3F-208ENST00000470737 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
SEMA3F-208ENST00000470737 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
SEMA3F-208ENST00000470737 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
SEMA3F-208ENST00000470737 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
SEMA3F-208ENST00000470737 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
SEMA3F-208ENST00000470737 SERP1Q9Y6X1 66 aa5.51□□□□□ -1.53
SEMA3F-208ENST00000470737 SEC61GP60059 68 aa5.47□□□□□ -1.53
SEMA3F-208ENST00000470737 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
SEMA3F-208ENST00000470737 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
SEMA3F-208ENST00000470737 A0A1B0GU69 56 aa5.39□□□□□ -1.55
SEMA3F-208ENST00000470737 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
SEMA3F-208ENST00000470737 PRR15LQ9BU68 103 aa5.37□□□□□ -1.55
SEMA3F-208ENST00000470737 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
SEMA3F-208ENST00000470737 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
SEMA3F-208ENST00000470737 V9GYY9 64 aa5.35□□□□□ -1.55
SEMA3F-208ENST00000470737 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
SEMA3F-208ENST00000470737 A0A1B0GU33 70 aa5.34□□□□□ -1.55
SEMA3F-208ENST00000470737 Q1T7F1 81 aa5.29□□□□□ -1.56
SEMA3F-208ENST00000470737 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
SEMA3F-208ENST00000470737 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
SEMA3F-208ENST00000470737 SPATA8Q6RVD6 105 aa5.25□□□□□ -1.57
SEMA3F-208ENST00000470737 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
SEMA3F-208ENST00000470737 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
SEMA3F-208ENST00000470737 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
SEMA3F-208ENST00000470737 A0A0D9SG42 100 aa5.2□□□□□ -1.58
SEMA3F-208ENST00000470737 UQCR11O14957 56 aa5.18□□□□□ -1.58
SEMA3F-208ENST00000470737 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
SEMA3F-208ENST00000470737 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
SEMA3F-208ENST00000470737 PSPHP1O15172 72 aa5.17□□□□□ -1.58
SEMA3F-208ENST00000470737 MT1EP04732 61 aa5.17□□□□□ -1.58
SEMA3F-208ENST00000470737 SPINT4Q6UDR6 99 aa5.14□□□□□ -1.59
SEMA3F-208ENST00000470737 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
SEMA3F-208ENST00000470737 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms