RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 LINC01558Q9Y6Z2 57 aa9.16□□□□□ -0.94
MRPL28-208ENST00000469744 A8MUN3 132 aa9.15□□□□□ -0.94
MRPL28-208ENST00000469744 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.95
MRPL28-208ENST00000469744 ATP11AUNQ6ZP68 121 aa9.15□□□□□ -0.95
MRPL28-208ENST00000469744 CHKB-CPT1BH3BT56 60 aa9.12□□□□□ -0.95
MRPL28-208ENST00000469744 PSPHP1O15172 72 aa9.11□□□□□ -0.95
MRPL28-208ENST00000469744 SVIPQ8NHG7 77 aa9.1□□□□□ -0.95
MRPL28-208ENST00000469744 KRTAP9-6A0A140TA67 174 aa9.09□□□□□ -0.95
MRPL28-208ENST00000469744 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
MRPL28-208ENST00000469744 Q5VV11 94 aa9.08□□□□□ -0.96
MRPL28-208ENST00000469744 PRR15LQ9BU68 103 aa9.08□□□□□ -0.96
MRPL28-208ENST00000469744 M0R2T5 61 aa9.06□□□□□ -0.96
MRPL28-208ENST00000469744 SPINK7P58062 85 aa9.06□□□□□ -0.96
MRPL28-208ENST00000469744 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
MRPL28-208ENST00000469744 PRO0628Q9UI54 55 aa9.04□□□□□ -0.96
MRPL28-208ENST00000469744 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
MRPL28-208ENST00000469744 FLGP20930 4061 aaPredicted RBP9.03□□□□□ -0.96
MRPL28-208ENST00000469744 BRK1Q8WUW1 75 aa9□□□□□ -0.97
MRPL28-208ENST00000469744 FSIP2Q5CZC0 6907 aa8.95□□□□□ -0.98
MRPL28-208ENST00000469744 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
MRPL28-208ENST00000469744 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
MRPL28-208ENST00000469744 CRCT1Q9UGL9 99 aa8.89□□□□□ -0.99
MRPL28-208ENST00000469744 A0A1B0GU69 56 aa8.87□□□□□ -0.99
MRPL28-208ENST00000469744 A6NED7 52 aa8.87□□□□□ -0.99
MRPL28-208ENST00000469744 CDC42SE1Q9NRR8 79 aa8.81□□□□□ -1
MRPL28-208ENST00000469744 LCA10Q71F78 164 aa8.77□□□□□ -1
MRPL28-208ENST00000469744 SEC61GP60059 68 aa8.75□□□□□ -1.01
MRPL28-208ENST00000469744 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
MRPL28-208ENST00000469744 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
MRPL28-208ENST00000469744 UQCR11O14957 56 aa8.69□□□□□ -1.02
MRPL28-208ENST00000469744 A8MU10 97 aa8.68□□□□□ -1.02
MRPL28-208ENST00000469744 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
MRPL28-208ENST00000469744 MT2AP02795 61 aa8.61□□□□□ -1.03
MRPL28-208ENST00000469744 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
MRPL28-208ENST00000469744 MIR22HGQ0VDD5 57 aa8.6□□□□□ -1.03
MRPL28-208ENST00000469744 S4R3F8 94 aa8.6□□□□□ -1.03
MRPL28-208ENST00000469744 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
MRPL28-208ENST00000469744 MT1FP04733 61 aa8.56□□□□□ -1.04
MRPL28-208ENST00000469744 PMAIP1Q13794 54 aa8.54□□□□□ -1.04
MRPL28-208ENST00000469744 A0A1B0GU33 70 aa8.51□□□□□ -1.05
MRPL28-208ENST00000469744 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
MRPL28-208ENST00000469744 USH2AO75445 5202 aa8.49□□□□□ -1.05
MRPL28-208ENST00000469744 A6NN06 94 aa8.48□□□□□ -1.05
MRPL28-208ENST00000469744 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
MRPL28-208ENST00000469744 LCE2BO14633 110 aa8.44□□□□□ -1.06
MRPL28-208ENST00000469744 SSPOA2VEC9 5147 aa8.43□□□□□ -1.06
MRPL28-208ENST00000469744 H0YAA0 97 aa8.4□□□□□ -1.06
MRPL28-208ENST00000469744 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
MRPL28-208ENST00000469744 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
MRPL28-208ENST00000469744 KTN1-AS1Q86SY8 53 aa8.32□□□□□ -1.08
MRPL28-208ENST00000469744 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
MRPL28-208ENST00000469744 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
MRPL28-208ENST00000469744 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
MRPL28-208ENST00000469744 ADM2Q7Z4H4 148 aa8.24□□□□□ -1.09
MRPL28-208ENST00000469744 P0C880 135 aa8.23□□□□□ -1.09
MRPL28-208ENST00000469744 KRTAP9-7A8MTY7 169 aa8.19□□□□□ -1.1
MRPL28-208ENST00000469744 K7ERS5 55 aa8.18□□□□□ -1.1
MRPL28-208ENST00000469744 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
MRPL28-208ENST00000469744 M0QZ58 72 aa8.13□□□□□ -1.11
MRPL28-208ENST00000469744 KRTAP19-6Q3LI70 58 aa8.1□□□□□ -1.11
MRPL28-208ENST00000469744 A0A0D9SG42 100 aa8.01□□□□□ -1.13
MRPL28-208ENST00000469744 MACF1Q9UPN3 7388 aaKnown RBP7.99□□□□□ -1.13
MRPL28-208ENST00000469744 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
MRPL28-208ENST00000469744 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
MRPL28-208ENST00000469744 R4GN34 69 aa7.92□□□□□ -1.14
MRPL28-208ENST00000469744 SYNE2Q8WXH0 6885 aaKnown RBP7.89□□□□□ -1.15
MRPL28-208ENST00000469744 ROMO1P60602 79 aa7.88□□□□□ -1.15
MRPL28-208ENST00000469744 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
MRPL28-208ENST00000469744 MT1BP07438 61 aa7.84□□□□□ -1.15
MRPL28-208ENST00000469744 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
MRPL28-208ENST00000469744 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
MRPL28-208ENST00000469744 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
MRPL28-208ENST00000469744 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
MRPL28-208ENST00000469744 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
MRPL28-208ENST00000469744 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
MRPL28-208ENST00000469744 KRTAP6-3Q3LI67 103 aa7.7□□□□□ -1.18
MRPL28-208ENST00000469744 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
MRPL28-208ENST00000469744 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
MRPL28-208ENST00000469744 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
MRPL28-208ENST00000469744 NEBP20929 6669 aa7.38□□□□□ -1.23
MRPL28-208ENST00000469744 MUC12Q9UKN1 5478 aa7.38□□□□□ -1.23
MRPL28-208ENST00000469744 KRTAP5-9P26371 169 aa7.34□□□□□ -1.23
MRPL28-208ENST00000469744 MT1XP80297 61 aa7.34□□□□□ -1.23
MRPL28-208ENST00000469744 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
MRPL28-208ENST00000469744 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
MRPL28-208ENST00000469744 KMT2DO14686 5537 aa7.28□□□□□ -1.24
MRPL28-208ENST00000469744 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
MRPL28-208ENST00000469744 TNP1P09430 55 aa7.2□□□□□ -1.26
MRPL28-208ENST00000469744 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
MRPL28-208ENST00000469744 MDN1Q9NU22 5596 aa7.19□□□□□ -1.26
MRPL28-208ENST00000469744 KRTAP20-1Q3LI63 56 aa7.17□□□□□ -1.26
MRPL28-208ENST00000469744 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
MRPL28-208ENST00000469744 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
MRPL28-208ENST00000469744 SPRR2EP22531 72 aa7.07□□□□□ -1.28
MRPL28-208ENST00000469744 SPRR2BP35325 72 aa7.07□□□□□ -1.28
MRPL28-208ENST00000469744 SPRR2AP35326 72 aa7.07□□□□□ -1.28
MRPL28-208ENST00000469744 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
MRPL28-208ENST00000469744 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
MRPL28-208ENST00000469744 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
MRPL28-208ENST00000469744 LCE1AQ5T7P2 110 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms