RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 XP32Q5T750 250 aa4.02□□□□□ -1.77
SFPQ-205ENST00000468598 KRTAP4-5Q9BYR2 181 aa4.01□□□□□ -1.77
SFPQ-205ENST00000468598 KRTAP10-4P60372 401 aaPredicted RBP3.99□□□□□ -1.77
SFPQ-205ENST00000468598 Q5VSD8 79 aa3.99□□□□□ -1.77
SFPQ-205ENST00000468598 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
SFPQ-205ENST00000468598 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
SFPQ-205ENST00000468598 KRTAP13-2Q52LG2 175 aa3.98□□□□□ -1.77
SFPQ-205ENST00000468598 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
SFPQ-205ENST00000468598 Q8N1X5 172 aa3.96□□□□□ -1.78
SFPQ-205ENST00000468598 FAT3Q8TDW7 4589 aa3.96□□□□□ -1.78
SFPQ-205ENST00000468598 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
SFPQ-205ENST00000468598 TNXBP22105 4242 aa3.94□□□□□ -1.78
SFPQ-205ENST00000468598 SPINK1P00995 79 aa3.92□□□□□ -1.78
SFPQ-205ENST00000468598 A8MUU9 505 aa3.92□□□□□ -1.78
SFPQ-205ENST00000468598 KRTAP1-4P0C5Y4 121 aa3.91□□□□□ -1.78
SFPQ-205ENST00000468598 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
SFPQ-205ENST00000468598 RPS29P62273 56 aaKnown RBP3.9□□□□□ -1.78
SFPQ-205ENST00000468598 HERC1Q15751 4861 aa3.9□□□□□ -1.79
SFPQ-205ENST00000468598 H0YAA0 97 aa3.89□□□□□ -1.79
SFPQ-205ENST00000468598 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
SFPQ-205ENST00000468598 A0A1B0GU33 70 aa3.88□□□□□ -1.79
SFPQ-205ENST00000468598 TYMSOSQ8TAI1 123 aa3.87□□□□□ -1.79
SFPQ-205ENST00000468598 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
SFPQ-205ENST00000468598 H1FX-AS1Q4G0G2 97 aa3.86□□□□□ -1.79
SFPQ-205ENST00000468598 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
SFPQ-205ENST00000468598 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
SFPQ-205ENST00000468598 K7ERS5 55 aa3.84□□□□□ -1.79
SFPQ-205ENST00000468598 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.8
SFPQ-205ENST00000468598 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
SFPQ-205ENST00000468598 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
SFPQ-205ENST00000468598 ROMO1P60602 79 aa3.82□□□□□ -1.8
SFPQ-205ENST00000468598 KRTAP3-1Q9BYR8 98 aa3.81□□□□□ -1.8
SFPQ-205ENST00000468598 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
SFPQ-205ENST00000468598 LPAP08519 4548 aa3.78□□□□□ -1.8
SFPQ-205ENST00000468598 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
SFPQ-205ENST00000468598 COX6B2Q6YFQ2 88 aa3.76□□□□□ -1.81
SFPQ-205ENST00000468598 LRP2P98164 4655 aa3.74□□□□□ -1.81
SFPQ-205ENST00000468598 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
SFPQ-205ENST00000468598 C9orf92A6NGG3 77 aa3.73□□□□□ -1.81
SFPQ-205ENST00000468598 HMCN2Q8NDA2 5059 aa3.73□□□□□ -1.81
SFPQ-205ENST00000468598 RPL37P61927 97 aaKnown RBP3.72□□□□□ -1.81
SFPQ-205ENST00000468598 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
SFPQ-205ENST00000468598 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
SFPQ-205ENST00000468598 P0C880 135 aa3.67□□□□□ -1.82
SFPQ-205ENST00000468598 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
SFPQ-205ENST00000468598 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
SFPQ-205ENST00000468598 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
SFPQ-205ENST00000468598 CRIPTQ9P021 101 aa3.66□□□□□ -1.82
SFPQ-205ENST00000468598 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
SFPQ-205ENST00000468598 MUC2Q02817 5179 aa3.65□□□□□ -1.83
SFPQ-205ENST00000468598 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
SFPQ-205ENST00000468598 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
SFPQ-205ENST00000468598 RNF213Q63HN8 5207 aa3.62□□□□□ -1.83
SFPQ-205ENST00000468598 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
SFPQ-205ENST00000468598 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
SFPQ-205ENST00000468598 S4R3F8 94 aa3.61□□□□□ -1.83
SFPQ-205ENST00000468598 A0A0D9SG42 100 aa3.6□□□□□ -1.83
SFPQ-205ENST00000468598 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
SFPQ-205ENST00000468598 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
SFPQ-205ENST00000468598 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
SFPQ-205ENST00000468598 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
SFPQ-205ENST00000468598 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
SFPQ-205ENST00000468598 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
SFPQ-205ENST00000468598 M0QZ58 72 aa3.52□□□□□ -1.85
SFPQ-205ENST00000468598 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
SFPQ-205ENST00000468598 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SFPQ-205ENST00000468598 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
SFPQ-205ENST00000468598 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
SFPQ-205ENST00000468598 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
SFPQ-205ENST00000468598 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
SFPQ-205ENST00000468598 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
SFPQ-205ENST00000468598 PLAC4Q8WY50 150 aa3.35□□□□□ -1.87
SFPQ-205ENST00000468598 R4GN34 69 aa3.34□□□□□ -1.87
SFPQ-205ENST00000468598 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
SFPQ-205ENST00000468598 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
SFPQ-205ENST00000468598 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
SFPQ-205ENST00000468598 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
SFPQ-205ENST00000468598 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
SFPQ-205ENST00000468598 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
SFPQ-205ENST00000468598 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
SFPQ-205ENST00000468598 MT1HP80294 61 aa3.23□□□□□ -1.89
SFPQ-205ENST00000468598 M0R2T5 61 aa3.2□□□□□ -1.9
SFPQ-205ENST00000468598 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
SFPQ-205ENST00000468598 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
SFPQ-205ENST00000468598 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
SFPQ-205ENST00000468598 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
SFPQ-205ENST00000468598 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
SFPQ-205ENST00000468598 TNP1P09430 55 aa3.13□□□□□ -1.91
SFPQ-205ENST00000468598 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
SFPQ-205ENST00000468598 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
SFPQ-205ENST00000468598 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
SFPQ-205ENST00000468598 MT2AP02795 61 aa3.07□□□□□ -1.92
SFPQ-205ENST00000468598 MT1FP04733 61 aa3.07□□□□□ -1.92
SFPQ-205ENST00000468598 USH2AO75445 5202 aa3.06□□□□□ -1.92
SFPQ-205ENST00000468598 KRTAP10-10P60014 251 aa3.05□□□□□ -1.92
SFPQ-205ENST00000468598 KRTAP9-3Q9BYQ3 159 aa3.05□□□□□ -1.92
SFPQ-205ENST00000468598 SPRR2GQ9BYE4 73 aa2.96□□□□□ -1.94
SFPQ-205ENST00000468598 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
SFPQ-205ENST00000468598 PRO2289Q9P1D8 64 aa2.94□□□□□ -1.94
SFPQ-205ENST00000468598 INE1O15225 51 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms