RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
COL16A1-208ENST00000468459 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
COL16A1-208ENST00000468459 TRAV7A0A075B6U4 112 aa7.04□□□□□ -1.28
COL16A1-208ENST00000468459 H3BPC8 53 aa7.03□□□□□ -1.28
COL16A1-208ENST00000468459 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
COL16A1-208ENST00000468459 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
COL16A1-208ENST00000468459 S4R3F8 94 aa7.02□□□□□ -1.29
COL16A1-208ENST00000468459 LCA10Q71F78 164 aa7□□□□□ -1.29
COL16A1-208ENST00000468459 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
COL16A1-208ENST00000468459 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
COL16A1-208ENST00000468459 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
COL16A1-208ENST00000468459 SERP2Q8N6R1 65 aa6.92□□□□□ -1.3
COL16A1-208ENST00000468459 SNURFQ9Y675 71 aa6.92□□□□□ -1.3
COL16A1-208ENST00000468459 A8MUN3 132 aa6.91□□□□□ -1.3
COL16A1-208ENST00000468459 CSAG1Q6PB30 78 aa6.89□□□□□ -1.31
COL16A1-208ENST00000468459 C20orf197Q8N268 126 aa6.88□□□□□ -1.31
COL16A1-208ENST00000468459 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
COL16A1-208ENST00000468459 NDUFC1O43677 76 aa6.81□□□□□ -1.32
COL16A1-208ENST00000468459 COX7CP15954 63 aa6.79□□□□□ -1.32
COL16A1-208ENST00000468459 ANAPC13Q9BS18 74 aa6.73□□□□□ -1.33
COL16A1-208ENST00000468459 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
COL16A1-208ENST00000468459 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
COL16A1-208ENST00000468459 ACYP2P14621 99 aa6.71□□□□□ -1.34
COL16A1-208ENST00000468459 KRTAP6-3Q3LI67 103 aa6.68□□□□□ -1.34
COL16A1-208ENST00000468459 H0YAA0 97 aa6.67□□□□□ -1.34
COL16A1-208ENST00000468459 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
COL16A1-208ENST00000468459 H7BZZ5 65 aa6.65□□□□□ -1.34
COL16A1-208ENST00000468459 CCDC179H3BU77 68 aa6.63□□□□□ -1.35
COL16A1-208ENST00000468459 CHKB-CPT1BH3BT56 60 aa6.62□□□□□ -1.35
COL16A1-208ENST00000468459 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
COL16A1-208ENST00000468459 NEBP20929 6669 aa6.59□□□□□ -1.35
COL16A1-208ENST00000468459 P0C880 135 aa6.58□□□□□ -1.36
COL16A1-208ENST00000468459 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
COL16A1-208ENST00000468459 MT1BP07438 61 aa6.57□□□□□ -1.36
COL16A1-208ENST00000468459 COA5Q86WW8 74 aa6.56□□□□□ -1.36
COL16A1-208ENST00000468459 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
COL16A1-208ENST00000468459 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
COL16A1-208ENST00000468459 CRIPTQ9P021 101 aa6.54□□□□□ -1.36
COL16A1-208ENST00000468459 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
COL16A1-208ENST00000468459 A6NN06 94 aa6.49□□□□□ -1.37
COL16A1-208ENST00000468459 Q5VV11 94 aa6.48□□□□□ -1.37
COL16A1-208ENST00000468459 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
COL16A1-208ENST00000468459 R4GN34 69 aa6.43□□□□□ -1.38
COL16A1-208ENST00000468459 M0QZ58 72 aa6.42□□□□□ -1.38
COL16A1-208ENST00000468459 ATP5EP56381 51 aaPredicted RBP6.36□□□□□ -1.39
COL16A1-208ENST00000468459 KMT2DO14686 5537 aa6.36□□□□□ -1.39
COL16A1-208ENST00000468459 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
COL16A1-208ENST00000468459 TMEM258P61165 79 aa6.33□□□□□ -1.4
COL16A1-208ENST00000468459 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
COL16A1-208ENST00000468459 MDN1Q9NU22 5596 aa6.33□□□□□ -1.4
COL16A1-208ENST00000468459 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
COL16A1-208ENST00000468459 SEC61GP60059 68 aa6.25□□□□□ -1.41
COL16A1-208ENST00000468459 SERP1Q9Y6X1 66 aa6.24□□□□□ -1.41
COL16A1-208ENST00000468459 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
COL16A1-208ENST00000468459 KRTAP20-1Q3LI63 56 aa6.22□□□□□ -1.41
COL16A1-208ENST00000468459 A0A1B0GU69 56 aa6.18□□□□□ -1.42
COL16A1-208ENST00000468459 MT1XP80297 61 aa6.18□□□□□ -1.42
COL16A1-208ENST00000468459 A0A1B0GU33 70 aa6.16□□□□□ -1.42
COL16A1-208ENST00000468459 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
COL16A1-208ENST00000468459 PCP4P48539 62 aa6.14□□□□□ -1.43
COL16A1-208ENST00000468459 A0A0D9SG42 100 aa6.12□□□□□ -1.43
COL16A1-208ENST00000468459 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
COL16A1-208ENST00000468459 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
COL16A1-208ENST00000468459 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
COL16A1-208ENST00000468459 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
COL16A1-208ENST00000468459 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
COL16A1-208ENST00000468459 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
COL16A1-208ENST00000468459 A8MU10 97 aa6.01□□□□□ -1.45
COL16A1-208ENST00000468459 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
COL16A1-208ENST00000468459 SPRR2EP22531 72 aa5.98□□□□□ -1.45
COL16A1-208ENST00000468459 SPRR2BP35325 72 aa5.98□□□□□ -1.45
COL16A1-208ENST00000468459 SPRR2AP35326 72 aa5.98□□□□□ -1.45
COL16A1-208ENST00000468459 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
COL16A1-208ENST00000468459 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
COL16A1-208ENST00000468459 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
COL16A1-208ENST00000468459 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
COL16A1-208ENST00000468459 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
COL16A1-208ENST00000468459 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
COL16A1-208ENST00000468459 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
COL16A1-208ENST00000468459 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
COL16A1-208ENST00000468459 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
COL16A1-208ENST00000468459 PSPHP1O15172 72 aa5.9□□□□□ -1.46
COL16A1-208ENST00000468459 Q1T7F1 81 aa5.9□□□□□ -1.46
COL16A1-208ENST00000468459 V9GYY9 64 aa5.88□□□□□ -1.47
COL16A1-208ENST00000468459 UQCR11O14957 56 aa5.87□□□□□ -1.47
COL16A1-208ENST00000468459 KRTAP10-12P60413 245 aa5.84□□□□□ -1.47
COL16A1-208ENST00000468459 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
COL16A1-208ENST00000468459 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
COL16A1-208ENST00000468459 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
COL16A1-208ENST00000468459 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
COL16A1-208ENST00000468459 SPRR2DP22532 72 aa5.78□□□□□ -1.48
COL16A1-208ENST00000468459 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
COL16A1-208ENST00000468459 A6NED7 52 aa5.69□□□□□ -1.5
COL16A1-208ENST00000468459 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
COL16A1-208ENST00000468459 K7ERS5 55 aa5.57□□□□□ -1.52
COL16A1-208ENST00000468459 TNP1P09430 55 aa5.55□□□□□ -1.52
COL16A1-208ENST00000468459 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
COL16A1-208ENST00000468459 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
COL16A1-208ENST00000468459 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
COL16A1-208ENST00000468459 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms