RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 MUC2Q02817 5179 aa7.78□□□□□ -1.16
DDX56-208ENST00000467318 A6NED7 52 aa7.77□□□□□ -1.17
DDX56-208ENST00000467318 KRTAP4-1Q9BYQ7 146 aa7.76□□□□□ -1.17
DDX56-208ENST00000467318 CDC42SE1Q9NRR8 79 aa7.73□□□□□ -1.17
DDX56-208ENST00000467318 IGKV2D-30A0A075B6S6 120 aa7.72□□□□□ -1.17
DDX56-208ENST00000467318 H3BS24 57 aa7.7□□□□□ -1.18
DDX56-208ENST00000467318 C7orf65Q6ZTY9 151 aa7.69□□□□□ -1.18
DDX56-208ENST00000467318 LCA10Q71F78 164 aa7.67□□□□□ -1.18
DDX56-208ENST00000467318 PMAIP1Q13794 54 aa7.65□□□□□ -1.18
DDX56-208ENST00000467318 SPINK7P58062 85 aa7.63□□□□□ -1.19
DDX56-208ENST00000467318 A0A1B0GU69 56 aa7.62□□□□□ -1.19
DDX56-208ENST00000467318 SPTSSBQ8NFR3 76 aa7.6□□□□□ -1.19
DDX56-208ENST00000467318 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
DDX56-208ENST00000467318 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
DDX56-208ENST00000467318 A8MU10 97 aa7.58□□□□□ -1.2
DDX56-208ENST00000467318 RBM12B-AS1Q9P1G2 102 aa7.52□□□□□ -1.21
DDX56-208ENST00000467318 UQCR11O14957 56 aa7.51□□□□□ -1.21
DDX56-208ENST00000467318 A6NN06 94 aa7.5□□□□□ -1.21
DDX56-208ENST00000467318 SEC61GP60059 68 aa7.5□□□□□ -1.21
DDX56-208ENST00000467318 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
DDX56-208ENST00000467318 SPATA8Q6RVD6 105 aa7.5□□□□□ -1.21
DDX56-208ENST00000467318 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
DDX56-208ENST00000467318 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
DDX56-208ENST00000467318 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
DDX56-208ENST00000467318 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
DDX56-208ENST00000467318 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
DDX56-208ENST00000467318 A0A0A0MQY5 61 aa7.4□□□□□ -1.23
DDX56-208ENST00000467318 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
DDX56-208ENST00000467318 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
DDX56-208ENST00000467318 MT1HP80294 61 aa7.32□□□□□ -1.24
DDX56-208ENST00000467318 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
DDX56-208ENST00000467318 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
DDX56-208ENST00000467318 FLGP20930 4061 aaPredicted RBP7.29□□□□□ -1.24
DDX56-208ENST00000467318 M0R2T5 61 aa7.25□□□□□ -1.25
DDX56-208ENST00000467318 A0A1B0GU33 70 aa7.24□□□□□ -1.25
DDX56-208ENST00000467318 S4R3F8 94 aa7.17□□□□□ -1.26
DDX56-208ENST00000467318 H0YAA0 97 aa7.14□□□□□ -1.27
DDX56-208ENST00000467318 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
DDX56-208ENST00000467318 K7ERS5 55 aa7.09□□□□□ -1.27
DDX56-208ENST00000467318 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
DDX56-208ENST00000467318 CSAG1Q6PB30 78 aa7.08□□□□□ -1.28
DDX56-208ENST00000467318 PRAC1Q96KF2 57 aa7.03□□□□□ -1.28
DDX56-208ENST00000467318 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
DDX56-208ENST00000467318 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
DDX56-208ENST00000467318 MT2AP02795 61 aa6.93□□□□□ -1.3
DDX56-208ENST00000467318 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
DDX56-208ENST00000467318 KRTAP10-10P60014 251 aa6.9□□□□□ -1.31
DDX56-208ENST00000467318 MT1FP04733 61 aa6.89□□□□□ -1.31
DDX56-208ENST00000467318 ROMO1P60602 79 aa6.82□□□□□ -1.32
DDX56-208ENST00000467318 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
DDX56-208ENST00000467318 P0C880 135 aa6.81□□□□□ -1.32
DDX56-208ENST00000467318 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
DDX56-208ENST00000467318 M0QZ58 72 aa6.8□□□□□ -1.32
DDX56-208ENST00000467318 A0A0D9SG42 100 aa6.78□□□□□ -1.32
DDX56-208ENST00000467318 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.32
DDX56-208ENST00000467318 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
DDX56-208ENST00000467318 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
DDX56-208ENST00000467318 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
DDX56-208ENST00000467318 LCE2BO14633 110 aa6.65□□□□□ -1.34
DDX56-208ENST00000467318 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
DDX56-208ENST00000467318 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
DDX56-208ENST00000467318 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
DDX56-208ENST00000467318 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
DDX56-208ENST00000467318 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
DDX56-208ENST00000467318 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
DDX56-208ENST00000467318 R4GN34 69 aa6.61□□□□□ -1.35
DDX56-208ENST00000467318 USH2AO75445 5202 aa6.55□□□□□ -1.36
DDX56-208ENST00000467318 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
DDX56-208ENST00000467318 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
DDX56-208ENST00000467318 MT1BP07438 61 aa6.44□□□□□ -1.38
DDX56-208ENST00000467318 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
DDX56-208ENST00000467318 KRTAP9-6A0A140TA67 174 aa6.39□□□□□ -1.39
DDX56-208ENST00000467318 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
DDX56-208ENST00000467318 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
DDX56-208ENST00000467318 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
DDX56-208ENST00000467318 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
DDX56-208ENST00000467318 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
DDX56-208ENST00000467318 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
DDX56-208ENST00000467318 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
DDX56-208ENST00000467318 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
DDX56-208ENST00000467318 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
DDX56-208ENST00000467318 MT1XP80297 61 aa6.15□□□□□ -1.42
DDX56-208ENST00000467318 TNP1P09430 55 aa6.03□□□□□ -1.44
DDX56-208ENST00000467318 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
DDX56-208ENST00000467318 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.45
DDX56-208ENST00000467318 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
DDX56-208ENST00000467318 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
DDX56-208ENST00000467318 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
DDX56-208ENST00000467318 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
DDX56-208ENST00000467318 KMT2DO14686 5537 aa5.82□□□□□ -1.48
DDX56-208ENST00000467318 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
DDX56-208ENST00000467318 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
DDX56-208ENST00000467318 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
DDX56-208ENST00000467318 LUZP6Q538Z0 58 aa5.75□□□□□ -1.49
DDX56-208ENST00000467318 KRTAP6-3Q3LI67 103 aa5.73□□□□□ -1.49
DDX56-208ENST00000467318 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
DDX56-208ENST00000467318 KRTAP5-9P26371 169 aa5.66□□□□□ -1.5
DDX56-208ENST00000467318 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
DDX56-208ENST00000467318 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
DDX56-208ENST00000467318 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms