RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 KRTAP4-1Q9BYQ7 146 aa5.56□□□□□ -1.52
MUC1-216ENST00000467134 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
MUC1-216ENST00000467134 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
MUC1-216ENST00000467134 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
MUC1-216ENST00000467134 V9GYY9 64 aa5.5□□□□□ -1.53
MUC1-216ENST00000467134 KRTAP19-2Q3LHN2 52 aa5.49□□□□□ -1.53
MUC1-216ENST00000467134 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
MUC1-216ENST00000467134 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
MUC1-216ENST00000467134 Q1T7F1 81 aa5.47□□□□□ -1.53
MUC1-216ENST00000467134 S4R3F8 94 aa5.47□□□□□ -1.53
MUC1-216ENST00000467134 LCA10Q71F78 164 aa5.43□□□□□ -1.54
MUC1-216ENST00000467134 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
MUC1-216ENST00000467134 CSAG1Q6PB30 78 aa5.38□□□□□ -1.55
MUC1-216ENST00000467134 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
MUC1-216ENST00000467134 H0YAA0 97 aa5.33□□□□□ -1.56
MUC1-216ENST00000467134 A0A1B0GU69 56 aa5.32□□□□□ -1.56
MUC1-216ENST00000467134 SEC61GP60059 68 aa5.32□□□□□ -1.56
MUC1-216ENST00000467134 RNF213Q63HN8 5207 aa5.29□□□□□ -1.56
MUC1-216ENST00000467134 Q5VV11 94 aa5.28□□□□□ -1.56
MUC1-216ENST00000467134 PSPHP1O15172 72 aa5.26□□□□□ -1.57
MUC1-216ENST00000467134 MT1HP80294 61 aa5.24□□□□□ -1.57
MUC1-216ENST00000467134 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
MUC1-216ENST00000467134 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
MUC1-216ENST00000467134 MUC2Q02817 5179 aa5.21□□□□□ -1.58
MUC1-216ENST00000467134 UQCR11O14957 56 aa5.18□□□□□ -1.58
MUC1-216ENST00000467134 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
MUC1-216ENST00000467134 A0A1B0GU33 70 aa5.17□□□□□ -1.58
MUC1-216ENST00000467134 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
MUC1-216ENST00000467134 P0C880 135 aa5.15□□□□□ -1.59
MUC1-216ENST00000467134 A6NED7 52 aa5.14□□□□□ -1.59
MUC1-216ENST00000467134 M0R2T5 61 aa5.13□□□□□ -1.59
MUC1-216ENST00000467134 CRIPTQ9P021 101 aa5.13□□□□□ -1.59
MUC1-216ENST00000467134 M0QZ58 72 aa5.12□□□□□ -1.59
MUC1-216ENST00000467134 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
MUC1-216ENST00000467134 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
MUC1-216ENST00000467134 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
MUC1-216ENST00000467134 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
MUC1-216ENST00000467134 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
MUC1-216ENST00000467134 MT2AP02795 61 aa5.03□□□□□ -1.6
MUC1-216ENST00000467134 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
MUC1-216ENST00000467134 R4GN34 69 aa5.03□□□□□ -1.6
MUC1-216ENST00000467134 PRO0628Q9UI54 55 aa4.99□□□□□ -1.61
MUC1-216ENST00000467134 MT1FP04733 61 aa4.98□□□□□ -1.61
MUC1-216ENST00000467134 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
MUC1-216ENST00000467134 A6NN06 94 aa4.97□□□□□ -1.61
MUC1-216ENST00000467134 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
MUC1-216ENST00000467134 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
MUC1-216ENST00000467134 A8MU10 97 aa4.93□□□□□ -1.62
MUC1-216ENST00000467134 K7ERS5 55 aa4.91□□□□□ -1.62
MUC1-216ENST00000467134 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
MUC1-216ENST00000467134 A0A0D9SG42 100 aa4.88□□□□□ -1.63
MUC1-216ENST00000467134 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
MUC1-216ENST00000467134 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
MUC1-216ENST00000467134 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
MUC1-216ENST00000467134 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
MUC1-216ENST00000467134 LINC01554Q52M75 96 aa4.84□□□□□ -1.63
MUC1-216ENST00000467134 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
MUC1-216ENST00000467134 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
MUC1-216ENST00000467134 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
MUC1-216ENST00000467134 H3BS24 57 aa4.76□□□□□ -1.65
MUC1-216ENST00000467134 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
MUC1-216ENST00000467134 MT1BP07438 61 aa4.74□□□□□ -1.65
MUC1-216ENST00000467134 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
MUC1-216ENST00000467134 ROMO1P60602 79 aa4.68□□□□□ -1.66
MUC1-216ENST00000467134 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
MUC1-216ENST00000467134 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
MUC1-216ENST00000467134 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
MUC1-216ENST00000467134 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
MUC1-216ENST00000467134 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
MUC1-216ENST00000467134 MT1XP80297 61 aa4.57□□□□□ -1.68
MUC1-216ENST00000467134 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
MUC1-216ENST00000467134 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
MUC1-216ENST00000467134 TNP1P09430 55 aa4.51□□□□□ -1.69
MUC1-216ENST00000467134 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
MUC1-216ENST00000467134 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
MUC1-216ENST00000467134 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
MUC1-216ENST00000467134 USH2AO75445 5202 aa4.48□□□□□ -1.69
MUC1-216ENST00000467134 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
MUC1-216ENST00000467134 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.7
MUC1-216ENST00000467134 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
MUC1-216ENST00000467134 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
MUC1-216ENST00000467134 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
MUC1-216ENST00000467134 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
MUC1-216ENST00000467134 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
MUC1-216ENST00000467134 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
MUC1-216ENST00000467134 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
MUC1-216ENST00000467134 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
MUC1-216ENST00000467134 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
MUC1-216ENST00000467134 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
MUC1-216ENST00000467134 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
MUC1-216ENST00000467134 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
MUC1-216ENST00000467134 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
MUC1-216ENST00000467134 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
MUC1-216ENST00000467134 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
MUC1-216ENST00000467134 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
MUC1-216ENST00000467134 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
MUC1-216ENST00000467134 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
MUC1-216ENST00000467134 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
MUC1-216ENST00000467134 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
MUC1-216ENST00000467134 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms