RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
DNMT3A-208ENST00000466601 SERP2Q8N6R1 65 aa6.84□□□□□ -1.31
DNMT3A-208ENST00000466601 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
DNMT3A-208ENST00000466601 SNURFQ9Y675 71 aa6.79□□□□□ -1.32
DNMT3A-208ENST00000466601 C20orf197Q8N268 126 aa6.78□□□□□ -1.32
DNMT3A-208ENST00000466601 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
DNMT3A-208ENST00000466601 NDUFC1O43677 76 aa6.76□□□□□ -1.33
DNMT3A-208ENST00000466601 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
DNMT3A-208ENST00000466601 COX7CP15954 63 aa6.72□□□□□ -1.33
DNMT3A-208ENST00000466601 ACYP2P14621 99 aa6.68□□□□□ -1.34
DNMT3A-208ENST00000466601 LCE2BO14633 110 aa6.66□□□□□ -1.34
DNMT3A-208ENST00000466601 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
DNMT3A-208ENST00000466601 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
DNMT3A-208ENST00000466601 USH2AO75445 5202 aa6.63□□□□□ -1.35
DNMT3A-208ENST00000466601 H0YAA0 97 aa6.61□□□□□ -1.35
DNMT3A-208ENST00000466601 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
DNMT3A-208ENST00000466601 ADM2Q7Z4H4 148 aa6.56□□□□□ -1.36
DNMT3A-208ENST00000466601 CYSTM1Q9H1C7 97 aa6.56□□□□□ -1.36
DNMT3A-208ENST00000466601 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
DNMT3A-208ENST00000466601 H7BZZ5 65 aa6.54□□□□□ -1.36
DNMT3A-208ENST00000466601 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
DNMT3A-208ENST00000466601 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
DNMT3A-208ENST00000466601 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
DNMT3A-208ENST00000466601 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
DNMT3A-208ENST00000466601 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
DNMT3A-208ENST00000466601 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
DNMT3A-208ENST00000466601 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
DNMT3A-208ENST00000466601 COA5Q86WW8 74 aa6.46□□□□□ -1.38
DNMT3A-208ENST00000466601 P0C880 135 aa6.45□□□□□ -1.38
DNMT3A-208ENST00000466601 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
DNMT3A-208ENST00000466601 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
DNMT3A-208ENST00000466601 Q5VV11 94 aa6.41□□□□□ -1.38
DNMT3A-208ENST00000466601 MT1BP07438 61 aa6.39□□□□□ -1.39
DNMT3A-208ENST00000466601 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
DNMT3A-208ENST00000466601 R4GN34 69 aa6.37□□□□□ -1.39
DNMT3A-208ENST00000466601 M0QZ58 72 aa6.33□□□□□ -1.4
DNMT3A-208ENST00000466601 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
DNMT3A-208ENST00000466601 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
DNMT3A-208ENST00000466601 TMEM258P61165 79 aa6.26□□□□□ -1.41
DNMT3A-208ENST00000466601 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
DNMT3A-208ENST00000466601 SEC61GP60059 68 aa6.24□□□□□ -1.41
DNMT3A-208ENST00000466601 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
DNMT3A-208ENST00000466601 SERP1Q9Y6X1 66 aa6.23□□□□□ -1.41
DNMT3A-208ENST00000466601 A6NN06 94 aa6.2□□□□□ -1.42
DNMT3A-208ENST00000466601 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
DNMT3A-208ENST00000466601 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
DNMT3A-208ENST00000466601 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
DNMT3A-208ENST00000466601 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
DNMT3A-208ENST00000466601 A0A1B0GU69 56 aa6.13□□□□□ -1.43
DNMT3A-208ENST00000466601 A0A1B0GU33 70 aa6.1□□□□□ -1.43
DNMT3A-208ENST00000466601 MT1XP80297 61 aa6.06□□□□□ -1.44
DNMT3A-208ENST00000466601 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
DNMT3A-208ENST00000466601 PCP4P48539 62 aa6.05□□□□□ -1.44
DNMT3A-208ENST00000466601 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
DNMT3A-208ENST00000466601 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
DNMT3A-208ENST00000466601 PRR15LQ9BU68 103 aa6.03□□□□□ -1.44
DNMT3A-208ENST00000466601 A0A0D9SG42 100 aa5.99□□□□□ -1.45
DNMT3A-208ENST00000466601 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
DNMT3A-208ENST00000466601 NEBP20929 6669 aa5.92□□□□□ -1.46
DNMT3A-208ENST00000466601 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
DNMT3A-208ENST00000466601 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
DNMT3A-208ENST00000466601 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.46
DNMT3A-208ENST00000466601 A8MU10 97 aa5.88□□□□□ -1.47
DNMT3A-208ENST00000466601 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
DNMT3A-208ENST00000466601 V9GYY9 64 aa5.88□□□□□ -1.47
DNMT3A-208ENST00000466601 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
DNMT3A-208ENST00000466601 Q1T7F1 81 aa5.85□□□□□ -1.47
DNMT3A-208ENST00000466601 UQCR11O14957 56 aa5.84□□□□□ -1.47
DNMT3A-208ENST00000466601 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
DNMT3A-208ENST00000466601 PSPHP1O15172 72 aa5.8□□□□□ -1.48
DNMT3A-208ENST00000466601 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
DNMT3A-208ENST00000466601 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
DNMT3A-208ENST00000466601 KMT2DO14686 5537 aa5.76□□□□□ -1.49
DNMT3A-208ENST00000466601 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
DNMT3A-208ENST00000466601 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
DNMT3A-208ENST00000466601 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
DNMT3A-208ENST00000466601 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
DNMT3A-208ENST00000466601 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
DNMT3A-208ENST00000466601 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
DNMT3A-208ENST00000466601 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
DNMT3A-208ENST00000466601 A6NED7 52 aa5.62□□□□□ -1.51
DNMT3A-208ENST00000466601 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
DNMT3A-208ENST00000466601 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
DNMT3A-208ENST00000466601 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
DNMT3A-208ENST00000466601 K7ERS5 55 aa5.57□□□□□ -1.52
DNMT3A-208ENST00000466601 TNP1P09430 55 aa5.53□□□□□ -1.52
DNMT3A-208ENST00000466601 SPRR2EP22531 72 aa5.47□□□□□ -1.53
DNMT3A-208ENST00000466601 SPRR2BP35325 72 aa5.47□□□□□ -1.53
DNMT3A-208ENST00000466601 SPRR2AP35326 72 aa5.47□□□□□ -1.53
DNMT3A-208ENST00000466601 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
DNMT3A-208ENST00000466601 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
DNMT3A-208ENST00000466601 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
DNMT3A-208ENST00000466601 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
DNMT3A-208ENST00000466601 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
DNMT3A-208ENST00000466601 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
DNMT3A-208ENST00000466601 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
DNMT3A-208ENST00000466601 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
DNMT3A-208ENST00000466601 MT1EP04732 61 aa5.35□□□□□ -1.55
DNMT3A-208ENST00000466601 SPRR2DP22532 72 aa5.28□□□□□ -1.56
DNMT3A-208ENST00000466601 ROMO1P60602 79 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms