RNA–Protein interactions for RNA: ENST00000463880.1

ARF4-202, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-202ENST00000463880 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
ARF4-202ENST00000463880 SMIM20Q8N5G0 67 aa9.68□□□□□ -0.86
ARF4-202ENST00000463880 LCE2BO14633 110 aa9.67□□□□□ -0.86
ARF4-202ENST00000463880 A8MUN3 132 aa9.65□□□□□ -0.86
ARF4-202ENST00000463880 USH2AO75445 5202 aa9.62□□□□□ -0.87
ARF4-202ENST00000463880 NDUFC1O43677 76 aa9.59□□□□□ -0.87
ARF4-202ENST00000463880 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
ARF4-202ENST00000463880 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
ARF4-202ENST00000463880 SERP2Q8N6R1 65 aa9.48□□□□□ -0.89
ARF4-202ENST00000463880 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
ARF4-202ENST00000463880 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
ARF4-202ENST00000463880 KRTAP19-1Q8IUB9 90 aa9.41□□□□□ -0.9
ARF4-202ENST00000463880 ACYP2P14621 99 aa9.37□□□□□ -0.91
ARF4-202ENST00000463880 ADM2Q7Z4H4 148 aa9.36□□□□□ -0.91
ARF4-202ENST00000463880 H0YAA0 97 aa9.34□□□□□ -0.91
ARF4-202ENST00000463880 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
ARF4-202ENST00000463880 COX7CP15954 63 aa9.28□□□□□ -0.92
ARF4-202ENST00000463880 CRIPTQ9P021 101 aa9.27□□□□□ -0.93
ARF4-202ENST00000463880 SPANXA2-OT1Q8N9U9 137 aa9.25□□□□□ -0.93
ARF4-202ENST00000463880 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
ARF4-202ENST00000463880 KRTAP19-6Q3LI70 58 aa9.24□□□□□ -0.93
ARF4-202ENST00000463880 Q5VV11 94 aa9.22□□□□□ -0.93
ARF4-202ENST00000463880 MT1BP07438 61 aa9.2□□□□□ -0.94
ARF4-202ENST00000463880 KRTAP19-8Q3LI54 63 aa9.2□□□□□ -0.94
ARF4-202ENST00000463880 FCGBPQ9Y6R7 5405 aaPredicted RBP9.19□□□□□ -0.94
ARF4-202ENST00000463880 P0C880 135 aa9.18□□□□□ -0.94
ARF4-202ENST00000463880 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
ARF4-202ENST00000463880 ANAPC13Q9BS18 74 aa9.15□□□□□ -0.94
ARF4-202ENST00000463880 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
ARF4-202ENST00000463880 CYSTM1Q9H1C7 97 aa9.12□□□□□ -0.95
ARF4-202ENST00000463880 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
ARF4-202ENST00000463880 R4GN34 69 aa9.08□□□□□ -0.96
ARF4-202ENST00000463880 H7BZZ5 65 aa9.06□□□□□ -0.96
ARF4-202ENST00000463880 M0QZ58 72 aa9.04□□□□□ -0.96
ARF4-202ENST00000463880 COA5Q86WW8 74 aa9.04□□□□□ -0.96
ARF4-202ENST00000463880 A6NN06 94 aa9□□□□□ -0.97
ARF4-202ENST00000463880 CCDC179H3BU77 68 aa8.98□□□□□ -0.97
ARF4-202ENST00000463880 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
ARF4-202ENST00000463880 KRTAP10-5P60370 271 aa8.9□□□□□ -0.98
ARF4-202ENST00000463880 MACF1Q9UPN3 7388 aaKnown RBP8.88□□□□□ -0.99
ARF4-202ENST00000463880 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
ARF4-202ENST00000463880 KRTAP9-7A8MTY7 169 aa8.87□□□□□ -0.99
ARF4-202ENST00000463880 SEC61GP60059 68 aa8.76□□□□□ -1.01
ARF4-202ENST00000463880 SERP1Q9Y6X1 66 aa8.75□□□□□ -1.01
ARF4-202ENST00000463880 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.02
ARF4-202ENST00000463880 SYNE2Q8WXH0 6885 aaKnown RBP8.71□□□□□ -1.02
ARF4-202ENST00000463880 MT1XP80297 61 aa8.7□□□□□ -1.02
ARF4-202ENST00000463880 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
ARF4-202ENST00000463880 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
ARF4-202ENST00000463880 TMEM258P61165 79 aa8.59□□□□□ -1.03
ARF4-202ENST00000463880 A0A1B0GU69 56 aa8.58□□□□□ -1.04
ARF4-202ENST00000463880 A0A1B0GU33 70 aa8.57□□□□□ -1.04
ARF4-202ENST00000463880 KRTAP6-3Q3LI67 103 aa8.57□□□□□ -1.04
ARF4-202ENST00000463880 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
ARF4-202ENST00000463880 A0A0D9SG42 100 aa8.53□□□□□ -1.04
ARF4-202ENST00000463880 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
ARF4-202ENST00000463880 SPINT4Q6UDR6 99 aa8.39□□□□□ -1.07
ARF4-202ENST00000463880 PRR15LQ9BU68 103 aa8.39□□□□□ -1.07
ARF4-202ENST00000463880 LINC01558Q9Y6Z2 57 aa8.38□□□□□ -1.07
ARF4-202ENST00000463880 KMT2DO14686 5537 aa8.37□□□□□ -1.07
ARF4-202ENST00000463880 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
ARF4-202ENST00000463880 KRTAP10-7P60409 375 aaPredicted RBP8.35□□□□□ -1.07
ARF4-202ENST00000463880 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
ARF4-202ENST00000463880 A8MU10 97 aa8.31□□□□□ -1.08
ARF4-202ENST00000463880 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
ARF4-202ENST00000463880 KRTAP5-9P26371 169 aa8.29□□□□□ -1.08
ARF4-202ENST00000463880 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
ARF4-202ENST00000463880 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
ARF4-202ENST00000463880 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
ARF4-202ENST00000463880 MUC12Q9UKN1 5478 aa8.25□□□□□ -1.09
ARF4-202ENST00000463880 KRTAP10-12P60413 245 aa8.24□□□□□ -1.09
ARF4-202ENST00000463880 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.1
ARF4-202ENST00000463880 PCP4P48539 62 aa8.17□□□□□ -1.1
ARF4-202ENST00000463880 NEBP20929 6669 aa8.17□□□□□ -1.1
ARF4-202ENST00000463880 UQCR11O14957 56 aa8.12□□□□□ -1.11
ARF4-202ENST00000463880 V9GYY9 64 aa8.06□□□□□ -1.12
ARF4-202ENST00000463880 PSPHP1O15172 72 aa8.05□□□□□ -1.12
ARF4-202ENST00000463880 Q1T7F1 81 aa8.02□□□□□ -1.13
ARF4-202ENST00000463880 SPRR2EP22531 72 aa8.01□□□□□ -1.13
ARF4-202ENST00000463880 SPRR2BP35325 72 aa8.01□□□□□ -1.13
ARF4-202ENST00000463880 SPRR2AP35326 72 aa8.01□□□□□ -1.13
ARF4-202ENST00000463880 MDN1Q9NU22 5596 aa8□□□□□ -1.13
ARF4-202ENST00000463880 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
ARF4-202ENST00000463880 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
ARF4-202ENST00000463880 LCE1AQ5T7P2 110 aa7.9□□□□□ -1.14
ARF4-202ENST00000463880 RPS28P62857 69 aaKnown RBP7.87□□□□□ -1.15
ARF4-202ENST00000463880 TNP1P09430 55 aa7.82□□□□□ -1.16
ARF4-202ENST00000463880 KRTAP20-1Q3LI63 56 aa7.82□□□□□ -1.16
ARF4-202ENST00000463880 A6NED7 52 aa7.79□□□□□ -1.16
ARF4-202ENST00000463880 K7ERS5 55 aa7.77□□□□□ -1.17
ARF4-202ENST00000463880 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
ARF4-202ENST00000463880 SPRR2DP22532 72 aa7.74□□□□□ -1.17
ARF4-202ENST00000463880 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
ARF4-202ENST00000463880 MT1EP04732 61 aa7.69□□□□□ -1.18
ARF4-202ENST00000463880 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
ARF4-202ENST00000463880 KRTAP2-3P0C7H8 128 aa7.68□□□□□ -1.18
ARF4-202ENST00000463880 KRTAP2-4Q9BYR9 128 aa7.68□□□□□ -1.18
ARF4-202ENST00000463880 KRTAP19-3Q7Z4W3 81 aa7.55□□□□□ -1.2
ARF4-202ENST00000463880 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
ARF4-202ENST00000463880 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms