RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	KMT2D	O14686	5537 aa		5.09	□□□□□ -1.6
PTPN7-204	ENST00000462815		H0Y9P7	68 aa		5.08	□□□□□ -1.6
PTPN7-204	ENST00000462815	C5orf47	Q569G3	176 aa		5.08	□□□□□ -1.6
PTPN7-204	ENST00000462815		A6NN06	94 aa		5.07	□□□□□ -1.6
PTPN7-204	ENST00000462815	IGKV2-30	P06310	120 aa		5.07	□□□□□ -1.6
PTPN7-204	ENST00000462815	KRTAP19-8	Q3LI54	63 aa		5.06	□□□□□ -1.6
PTPN7-204	ENST00000462815	KRTAP5-9	P26371	169 aa		5.05	□□□□□ -1.6
PTPN7-204	ENST00000462815	SERP2	Q8N6R1	65 aa		5.05	□□□□□ -1.6
PTPN7-204	ENST00000462815	IGKV2D-30	A0A075B6S6	120 aa		5.04	□□□□□ -1.6
PTPN7-204	ENST00000462815	CYP4F30P	Q9H0H9	118 aa		5.04	□□□□□ -1.6
PTPN7-204	ENST00000462815	MP68	P56378	58 aa		5.03	□□□□□ -1.6
PTPN7-204	ENST00000462815	C7orf65	Q6ZTY9	151 aa		5.03	□□□□□ -1.6
PTPN7-204	ENST00000462815	C1orf64	Q8NEQ6	169 aa		5.03	□□□□□ -1.6
PTPN7-204	ENST00000462815	LINC00208	Q96KT6	92 aa		5.03	□□□□□ -1.6
PTPN7-204	ENST00000462815	SPRR2G	Q9BYE4	73 aa		5.03	□□□□□ -1.6
PTPN7-204	ENST00000462815	LOC101927531	A0A1B0GV80	90 aa		5.02	□□□□□ -1.61
PTPN7-204	ENST00000462815		H3BPC8	53 aa		5.02	□□□□□ -1.61
PTPN7-204	ENST00000462815	KRTAP10-5	P60370	271 aa		5.02	□□□□□ -1.61
PTPN7-204	ENST00000462815	COX7C	P15954	63 aa		5	□□□□□ -1.61
PTPN7-204	ENST00000462815	KLKP1	Q107X0	134 aa		4.99	□□□□□ -1.61
PTPN7-204	ENST00000462815		Q5VV11	94 aa		4.99	□□□□□ -1.61
PTPN7-204	ENST00000462815	ANAPC13	Q9BS18	74 aa		4.99	□□□□□ -1.61
PTPN7-204	ENST00000462815	KRTAP3-1	Q9BYR8	98 aa		4.98	□□□□□ -1.61
PTPN7-204	ENST00000462815	C4orf26	Q17RF5	130 aa		4.97	□□□□□ -1.61
PTPN7-204	ENST00000462815	C20orf197	Q8N268	126 aa		4.96	□□□□□ -1.62
PTPN7-204	ENST00000462815	SNURF	Q9Y675	71 aa		4.96	□□□□□ -1.62
PTPN7-204	ENST00000462815	CCDC179	H3BU77	68 aa		4.92	□□□□□ -1.62
PTPN7-204	ENST00000462815	CYSTM1	Q9H1C7	97 aa		4.91	□□□□□ -1.62
PTPN7-204	ENST00000462815	LCA10	Q71F78	164 aa		4.9	□□□□□ -1.63
PTPN7-204	ENST00000462815	KRTAP2-3	P0C7H8	128 aa		4.89	□□□□□ -1.63
PTPN7-204	ENST00000462815	KRTAP2-4	Q9BYR9	128 aa		4.89	□□□□□ -1.63
PTPN7-204	ENST00000462815		S4R3F8	94 aa		4.89	□□□□□ -1.63
PTPN7-204	ENST00000462815	KRTAP3-3	Q9BYR6	98 aa		4.87	□□□□□ -1.63
PTPN7-204	ENST00000462815		H7BZZ5	65 aa		4.86	□□□□□ -1.63
PTPN7-204	ENST00000462815	CSAG1	Q6PB30	78 aa		4.86	□□□□□ -1.63
PTPN7-204	ENST00000462815	NDUFC1	O43677	76 aa		4.84	□□□□□ -1.63
PTPN7-204	ENST00000462815	SPANXA2-OT1	Q8N9U9	137 aa		4.84	□□□□□ -1.63
PTPN7-204	ENST00000462815		A8MUN3	132 aa		4.82	□□□□□ -1.64
PTPN7-204	ENST00000462815	DMAC1	Q96GE9	116 aa		4.82	□□□□□ -1.64
PTPN7-204	ENST00000462815	PCP4	P48539	62 aa		4.8	□□□□□ -1.64
PTPN7-204	ENST00000462815	SPRR2E	P22531	72 aa		4.78	□□□□□ -1.64
PTPN7-204	ENST00000462815	SPRR2B	P35325	72 aa		4.78	□□□□□ -1.64
PTPN7-204	ENST00000462815	SPRR2A	P35326	72 aa		4.78	□□□□□ -1.64
PTPN7-204	ENST00000462815	SPRR2F	Q96RM1	72 aa		4.78	□□□□□ -1.64
PTPN7-204	ENST00000462815	ACYP2	P14621	99 aa		4.76	□□□□□ -1.65
PTPN7-204	ENST00000462815	CRIPT	Q9P021	101 aa		4.76	□□□□□ -1.65
PTPN7-204	ENST00000462815	MT1X	P80297	61 aa		4.73	□□□□□ -1.65
PTPN7-204	ENST00000462815	LCE1A	Q5T7P2	110 aa		4.72	□□□□□ -1.65
PTPN7-204	ENST00000462815	TMEM258	P61165	79 aa		4.71	□□□□□ -1.66
PTPN7-204	ENST00000462815	KRTAP2-2	Q9BYT5	123 aa		4.71	□□□□□ -1.66
PTPN7-204	ENST00000462815	KRTAP2-1	Q9BYU5	128 aa		4.71	□□□□□ -1.66
PTPN7-204	ENST00000462815	ATP5E	P56381	51 aa	Predicted RBP	4.69	□□□□□ -1.66
PTPN7-204	ENST00000462815		H0YAA0	97 aa		4.67	□□□□□ -1.66
PTPN7-204	ENST00000462815	COA5	Q86WW8	74 aa		4.67	□□□□□ -1.66
PTPN7-204	ENST00000462815	KRTAP12-2	P59991	146 aa		4.65	□□□□□ -1.67
PTPN7-204	ENST00000462815	KRTAP8-1	Q8IUC2	63 aa		4.65	□□□□□ -1.67
PTPN7-204	ENST00000462815	CHKB-CPT1B	H3BT56	60 aa		4.63	□□□□□ -1.67
PTPN7-204	ENST00000462815	SPRR2D	P22532	72 aa		4.63	□□□□□ -1.67
PTPN7-204	ENST00000462815	PRO2289	Q9P1D8	64 aa		4.62	□□□□□ -1.67
PTPN7-204	ENST00000462815	KRTAP4-8	A0A0G2JLE6	195 aa		4.6	□□□□□ -1.67
PTPN7-204	ENST00000462815	KRTAP4-8	Q9BYQ9	185 aa		4.6	□□□□□ -1.67
PTPN7-204	ENST00000462815	SPTSSB	Q8NFR3	76 aa		4.59	□□□□□ -1.67
PTPN7-204	ENST00000462815	ADM2	Q7Z4H4	148 aa		4.57	□□□□□ -1.68
PTPN7-204	ENST00000462815	SERP1	Q9Y6X1	66 aa		4.57	□□□□□ -1.68
PTPN7-204	ENST00000462815	KRTAP3-2	Q9BYR7	98 aa		4.55	□□□□□ -1.68
PTPN7-204	ENST00000462815	PLAC4	Q8WY50	150 aa		4.54	□□□□□ -1.68
PTPN7-204	ENST00000462815	LCE3B	Q5TA77	95 aa		4.52	□□□□□ -1.69
PTPN7-204	ENST00000462815	RPS28	P62857	69 aa	Known RBP	4.51	□□□□□ -1.69
PTPN7-204	ENST00000462815		P0C880	135 aa		4.5	□□□□□ -1.69
PTPN7-204	ENST00000462815	KRTAP10-7	P60409	375 aa	Predicted RBP	4.5	□□□□□ -1.69
PTPN7-204	ENST00000462815	KRTAP10-12	P60413	245 aa		4.48	□□□□□ -1.69
PTPN7-204	ENST00000462815	GPR98	Q8WXG9	6306 aa		4.47	□□□□□ -1.69
PTPN7-204	ENST00000462815	LINC01558	Q9Y6Z2	57 aa		4.46	□□□□□ -1.7
PTPN7-204	ENST00000462815		R4GN34	69 aa		4.44	□□□□□ -1.7
PTPN7-204	ENST00000462815	SMIM26	A0A096LP01	95 aa		4.43	□□□□□ -1.7
PTPN7-204	ENST00000462815		A0A1B0GU69	56 aa		4.41	□□□□□ -1.7
PTPN7-204	ENST00000462815		M0QZ58	72 aa		4.41	□□□□□ -1.7
PTPN7-204	ENST00000462815	SEC61G	P60059	68 aa		4.41	□□□□□ -1.7
PTPN7-204	ENST00000462815		Q1T7F1	81 aa		4.41	□□□□□ -1.7
PTPN7-204	ENST00000462815	DST	Q03001	7570 aa	Known RBP	4.4	□□□□□ -1.7
PTPN7-204	ENST00000462815	LINC01554	Q52M75	96 aa		4.37	□□□□□ -1.71
PTPN7-204	ENST00000462815		V9GYY9	64 aa		4.37	□□□□□ -1.71
PTPN7-204	ENST00000462815	KRTAP13-4	Q3LI77	160 aa		4.36	□□□□□ -1.71
PTPN7-204	ENST00000462815	PRR15L	Q9BU68	103 aa		4.36	□□□□□ -1.71
PTPN7-204	ENST00000462815		A0A1B0GU33	70 aa		4.35	□□□□□ -1.71
PTPN7-204	ENST00000462815	KRTAP4-9	Q9BYQ8	210 aa		4.33	□□□□□ -1.72
PTPN7-204	ENST00000462815	PSPHP1	O15172	72 aa		4.31	□□□□□ -1.72
PTPN7-204	ENST00000462815	SPATA8	Q6RVD6	105 aa		4.3	□□□□□ -1.72
PTPN7-204	ENST00000462815	LCE5A	Q5TCM9	118 aa		4.27	□□□□□ -1.73
PTPN7-204	ENST00000462815	KRTAP19-7	Q3SYF9	63 aa		4.25	□□□□□ -1.73
PTPN7-204	ENST00000462815	UQCR11	O14957	56 aa		4.24	□□□□□ -1.73
PTPN7-204	ENST00000462815		A8MU10	97 aa		4.21	□□□□□ -1.74
PTPN7-204	ENST00000462815	HMCN1	Q96RW7	5635 aa		4.2	□□□□□ -1.74
PTPN7-204	ENST00000462815		A0A0D9SG42	100 aa		4.2	□□□□□ -1.74
PTPN7-204	ENST00000462815	MT1E	P04732	61 aa		4.2	□□□□□ -1.74
PTPN7-204	ENST00000462815	KRTAP19-3	Q7Z4W3	81 aa		4.2	□□□□□ -1.74
PTPN7-204	ENST00000462815	MIR22HG	Q0VDD5	57 aa		4.18	□□□□□ -1.74
PTPN7-204	ENST00000462815	KRTAP12-1	P59990	96 aa		4.17	□□□□□ -1.74
PTPN7-204	ENST00000462815	LCE1D	Q5T752	114 aa		4.17	□□□□□ -1.74
PTPN7-204	ENST00000462815		A6NED7	52 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms