RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 KRTAP9-3Q9BYQ3 159 aa8.95□□□□□ -0.98
PDLIM4-204ENST00000462597 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.93□□□□□ -0.98
PDLIM4-204ENST00000462597 FCGBPQ9Y6R7 5405 aaPredicted RBP8.9□□□□□ -0.99
PDLIM4-204ENST00000462597 S4R3F8 94 aa8.87□□□□□ -0.99
PDLIM4-204ENST00000462597 KRTAP19-1Q8IUB9 90 aa8.86□□□□□ -0.99
PDLIM4-204ENST00000462597 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
PDLIM4-204ENST00000462597 KRTAP9-7A8MTY7 169 aa8.85□□□□□ -0.99
PDLIM4-204ENST00000462597 LCA10Q71F78 164 aa8.81□□□□□ -1
PDLIM4-204ENST00000462597 SNURFQ9Y675 71 aa8.81□□□□□ -1
PDLIM4-204ENST00000462597 A8MUN3 132 aa8.79□□□□□ -1
PDLIM4-204ENST00000462597 C20orf197Q8N268 126 aa8.79□□□□□ -1
PDLIM4-204ENST00000462597 CSAG1Q6PB30 78 aa8.72□□□□□ -1.01
PDLIM4-204ENST00000462597 DMAC1Q96GE9 116 aa8.72□□□□□ -1.01
PDLIM4-204ENST00000462597 COX7CP15954 63 aa8.71□□□□□ -1.02
PDLIM4-204ENST00000462597 MACF1Q9UPN3 7388 aaKnown RBP8.71□□□□□ -1.02
PDLIM4-204ENST00000462597 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
PDLIM4-204ENST00000462597 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
PDLIM4-204ENST00000462597 NDUFC1O43677 76 aa8.64□□□□□ -1.03
PDLIM4-204ENST00000462597 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
PDLIM4-204ENST00000462597 KRTAP19-6Q3LI70 58 aa8.63□□□□□ -1.03
PDLIM4-204ENST00000462597 ACYP2P14621 99 aa8.58□□□□□ -1.04
PDLIM4-204ENST00000462597 SPANXA2-OT1Q8N9U9 137 aa8.58□□□□□ -1.04
PDLIM4-204ENST00000462597 CYSTM1Q9H1C7 97 aa8.54□□□□□ -1.04
PDLIM4-204ENST00000462597 H7BZZ5 65 aa8.49□□□□□ -1.05
PDLIM4-204ENST00000462597 CCDC179H3BU77 68 aa8.48□□□□□ -1.05
PDLIM4-204ENST00000462597 CHKB-CPT1BH3BT56 60 aa8.45□□□□□ -1.06
PDLIM4-204ENST00000462597 H0YAA0 97 aa8.43□□□□□ -1.06
PDLIM4-204ENST00000462597 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
PDLIM4-204ENST00000462597 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
PDLIM4-204ENST00000462597 COA5Q86WW8 74 aa8.35□□□□□ -1.07
PDLIM4-204ENST00000462597 KRTAP6-3Q3LI67 103 aa8.28□□□□□ -1.08
PDLIM4-204ENST00000462597 CRIPTQ9P021 101 aa8.28□□□□□ -1.08
PDLIM4-204ENST00000462597 MT1BP07438 61 aa8.27□□□□□ -1.09
PDLIM4-204ENST00000462597 SPRR2GQ9BYE4 73 aa8.27□□□□□ -1.09
PDLIM4-204ENST00000462597 P0C880 135 aa8.26□□□□□ -1.09
PDLIM4-204ENST00000462597 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
PDLIM4-204ENST00000462597 Q5VV11 94 aa8.22□□□□□ -1.09
PDLIM4-204ENST00000462597 ATP5EP56381 51 aaPredicted RBP8.21□□□□□ -1.1
PDLIM4-204ENST00000462597 A6NN06 94 aa8.2□□□□□ -1.1
PDLIM4-204ENST00000462597 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
PDLIM4-204ENST00000462597 TMEM258P61165 79 aa8.16□□□□□ -1.1
PDLIM4-204ENST00000462597 R4GN34 69 aa8.14□□□□□ -1.11
PDLIM4-204ENST00000462597 PCP4P48539 62 aa8.13□□□□□ -1.11
PDLIM4-204ENST00000462597 NEBP20929 6669 aa8.13□□□□□ -1.11
PDLIM4-204ENST00000462597 M0QZ58 72 aa8.11□□□□□ -1.11
PDLIM4-204ENST00000462597 KRTAP10-5P60370 271 aa8.08□□□□□ -1.12
PDLIM4-204ENST00000462597 SEC61GP60059 68 aa8.03□□□□□ -1.12
PDLIM4-204ENST00000462597 MUC12Q9UKN1 5478 aa8.02□□□□□ -1.13
PDLIM4-204ENST00000462597 SERP1Q9Y6X1 66 aa8□□□□□ -1.13
PDLIM4-204ENST00000462597 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
PDLIM4-204ENST00000462597 A0A1B0GU69 56 aa7.91□□□□□ -1.14
PDLIM4-204ENST00000462597 KRTAP13-4Q3LI77 160 aa7.9□□□□□ -1.14
PDLIM4-204ENST00000462597 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
PDLIM4-204ENST00000462597 KRTAP5-9P26371 169 aa7.85□□□□□ -1.15
PDLIM4-204ENST00000462597 A0A1B0GU33 70 aa7.84□□□□□ -1.15
PDLIM4-204ENST00000462597 KMT2DO14686 5537 aa7.83□□□□□ -1.16
PDLIM4-204ENST00000462597 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
PDLIM4-204ENST00000462597 MDN1Q9NU22 5596 aa7.81□□□□□ -1.16
PDLIM4-204ENST00000462597 PRR15LQ9BU68 103 aa7.8□□□□□ -1.16
PDLIM4-204ENST00000462597 SPATA8Q6RVD6 105 aa7.78□□□□□ -1.16
PDLIM4-204ENST00000462597 KRTAP20-1Q3LI63 56 aa7.75□□□□□ -1.17
PDLIM4-204ENST00000462597 A0A0D9SG42 100 aa7.73□□□□□ -1.17
PDLIM4-204ENST00000462597 MT1XP80297 61 aa7.72□□□□□ -1.17
PDLIM4-204ENST00000462597 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
PDLIM4-204ENST00000462597 RPS28P62857 69 aaKnown RBP7.64□□□□□ -1.19
PDLIM4-204ENST00000462597 SMIM26A0A096LP01 95 aa7.62□□□□□ -1.19
PDLIM4-204ENST00000462597 SPRR2FQ96RM1 72 aa7.62□□□□□ -1.19
PDLIM4-204ENST00000462597 V9GYY9 64 aa7.62□□□□□ -1.19
PDLIM4-204ENST00000462597 A8MU10 97 aa7.59□□□□□ -1.19
PDLIM4-204ENST00000462597 Q1T7F1 81 aa7.59□□□□□ -1.19
PDLIM4-204ENST00000462597 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
PDLIM4-204ENST00000462597 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
PDLIM4-204ENST00000462597 SPRR2EP22531 72 aa7.55□□□□□ -1.2
PDLIM4-204ENST00000462597 SPRR2BP35325 72 aa7.55□□□□□ -1.2
PDLIM4-204ENST00000462597 SPRR2AP35326 72 aa7.55□□□□□ -1.2
PDLIM4-204ENST00000462597 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
PDLIM4-204ENST00000462597 UQCR11O14957 56 aa7.54□□□□□ -1.2
PDLIM4-204ENST00000462597 PSPHP1O15172 72 aa7.54□□□□□ -1.2
PDLIM4-204ENST00000462597 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
PDLIM4-204ENST00000462597 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
PDLIM4-204ENST00000462597 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
PDLIM4-204ENST00000462597 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
PDLIM4-204ENST00000462597 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
PDLIM4-204ENST00000462597 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
PDLIM4-204ENST00000462597 MIR22HGQ0VDD5 57 aa7.42□□□□□ -1.22
PDLIM4-204ENST00000462597 LCE1AQ5T7P2 110 aa7.42□□□□□ -1.22
PDLIM4-204ENST00000462597 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
PDLIM4-204ENST00000462597 A6NED7 52 aa7.32□□□□□ -1.24
PDLIM4-204ENST00000462597 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
PDLIM4-204ENST00000462597 SPRR2DP22532 72 aa7.29□□□□□ -1.24
PDLIM4-204ENST00000462597 KRTAP2-2Q9BYT5 123 aa7.23□□□□□ -1.25
PDLIM4-204ENST00000462597 KRTAP2-1Q9BYU5 128 aa7.23□□□□□ -1.25
PDLIM4-204ENST00000462597 K7ERS5 55 aa7.19□□□□□ -1.26
PDLIM4-204ENST00000462597 C10orf95Q9H7T3 257 aa7.18□□□□□ -1.26
PDLIM4-204ENST00000462597 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
PDLIM4-204ENST00000462597 TNP1P09430 55 aa7.07□□□□□ -1.28
PDLIM4-204ENST00000462597 CDC42SE1Q9NRR8 79 aa7.07□□□□□ -1.28
PDLIM4-204ENST00000462597 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
PDLIM4-204ENST00000462597 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.3
PDLIM4-204ENST00000462597 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms