RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 LCA10Q71F78 164 aa4.74□□□□□ -1.65
C9orf78-203ENST00000461539 PCP4P48539 62 aa4.72□□□□□ -1.65
C9orf78-203ENST00000461539 CSAG1Q6PB30 78 aa4.71□□□□□ -1.66
C9orf78-203ENST00000461539 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
C9orf78-203ENST00000461539 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
C9orf78-203ENST00000461539 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
C9orf78-203ENST00000461539 TMEM258P61165 79 aa4.67□□□□□ -1.66
C9orf78-203ENST00000461539 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
C9orf78-203ENST00000461539 COA5Q86WW8 74 aa4.66□□□□□ -1.66
C9orf78-203ENST00000461539 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.67
C9orf78-203ENST00000461539 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
C9orf78-203ENST00000461539 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
C9orf78-203ENST00000461539 MT2AP02795 61 aa4.59□□□□□ -1.67
C9orf78-203ENST00000461539 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
C9orf78-203ENST00000461539 MT1FP04733 61 aa4.56□□□□□ -1.68
C9orf78-203ENST00000461539 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
C9orf78-203ENST00000461539 H0YAA0 97 aa4.54□□□□□ -1.68
C9orf78-203ENST00000461539 SERP1Q9Y6X1 66 aa4.53□□□□□ -1.68
C9orf78-203ENST00000461539 KRTAP3-2Q9BYR7 98 aa4.48□□□□□ -1.69
C9orf78-203ENST00000461539 P0C880 135 aa4.47□□□□□ -1.69
C9orf78-203ENST00000461539 SEC61GP60059 68 aa4.47□□□□□ -1.69
C9orf78-203ENST00000461539 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
C9orf78-203ENST00000461539 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
C9orf78-203ENST00000461539 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
C9orf78-203ENST00000461539 A0A1B0GU69 56 aa4.42□□□□□ -1.7
C9orf78-203ENST00000461539 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
C9orf78-203ENST00000461539 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
C9orf78-203ENST00000461539 R4GN34 69 aa4.4□□□□□ -1.71
C9orf78-203ENST00000461539 M0QZ58 72 aa4.39□□□□□ -1.71
C9orf78-203ENST00000461539 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
C9orf78-203ENST00000461539 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
C9orf78-203ENST00000461539 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
C9orf78-203ENST00000461539 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
C9orf78-203ENST00000461539 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
C9orf78-203ENST00000461539 LCE2BO14633 110 aa4.37□□□□□ -1.71
C9orf78-203ENST00000461539 A0A1B0GU33 70 aa4.35□□□□□ -1.71
C9orf78-203ENST00000461539 V9GYY9 64 aa4.35□□□□□ -1.71
C9orf78-203ENST00000461539 LINC01554Q52M75 96 aa4.33□□□□□ -1.72
C9orf78-203ENST00000461539 Q1T7F1 81 aa4.32□□□□□ -1.72
C9orf78-203ENST00000461539 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
C9orf78-203ENST00000461539 PSPHP1O15172 72 aa4.3□□□□□ -1.72
C9orf78-203ENST00000461539 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
C9orf78-203ENST00000461539 Q5VV11 94 aa4.3□□□□□ -1.72
C9orf78-203ENST00000461539 SPATA8Q6RVD6 105 aa4.29□□□□□ -1.72
C9orf78-203ENST00000461539 USH2AO75445 5202 aa4.28□□□□□ -1.72
C9orf78-203ENST00000461539 MT1BP07438 61 aa4.27□□□□□ -1.73
C9orf78-203ENST00000461539 A0A0D9SG42 100 aa4.25□□□□□ -1.73
C9orf78-203ENST00000461539 UQCR11O14957 56 aa4.23□□□□□ -1.73
C9orf78-203ENST00000461539 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
C9orf78-203ENST00000461539 FSIP2Q5CZC0 6907 aa4.22□□□□□ -1.73
C9orf78-203ENST00000461539 A6NN06 94 aa4.2□□□□□ -1.74
C9orf78-203ENST00000461539 A8MU10 97 aa4.2□□□□□ -1.74
C9orf78-203ENST00000461539 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
C9orf78-203ENST00000461539 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
C9orf78-203ENST00000461539 A6NED7 52 aa4.17□□□□□ -1.74
C9orf78-203ENST00000461539 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
C9orf78-203ENST00000461539 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
C9orf78-203ENST00000461539 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
C9orf78-203ENST00000461539 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
C9orf78-203ENST00000461539 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
C9orf78-203ENST00000461539 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
C9orf78-203ENST00000461539 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
C9orf78-203ENST00000461539 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
C9orf78-203ENST00000461539 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
C9orf78-203ENST00000461539 MT1XP80297 61 aa4.07□□□□□ -1.76
C9orf78-203ENST00000461539 K7ERS5 55 aa4.05□□□□□ -1.76
C9orf78-203ENST00000461539 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
C9orf78-203ENST00000461539 CDC42SE1Q9NRR8 79 aa4.04□□□□□ -1.76
C9orf78-203ENST00000461539 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
C9orf78-203ENST00000461539 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
C9orf78-203ENST00000461539 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
C9orf78-203ENST00000461539 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
C9orf78-203ENST00000461539 TNP1P09430 55 aa3.87□□□□□ -1.79
C9orf78-203ENST00000461539 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
C9orf78-203ENST00000461539 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
C9orf78-203ENST00000461539 ROMO1P60602 79 aa3.83□□□□□ -1.8
C9orf78-203ENST00000461539 KRTAP4-8A0A0G2JLE6 195 aa3.81□□□□□ -1.8
C9orf78-203ENST00000461539 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
C9orf78-203ENST00000461539 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
C9orf78-203ENST00000461539 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
C9orf78-203ENST00000461539 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
C9orf78-203ENST00000461539 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
C9orf78-203ENST00000461539 KMT2DO14686 5537 aa3.75□□□□□ -1.81
C9orf78-203ENST00000461539 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
C9orf78-203ENST00000461539 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
C9orf78-203ENST00000461539 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
C9orf78-203ENST00000461539 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
C9orf78-203ENST00000461539 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
C9orf78-203ENST00000461539 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
C9orf78-203ENST00000461539 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
C9orf78-203ENST00000461539 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
C9orf78-203ENST00000461539 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
C9orf78-203ENST00000461539 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
C9orf78-203ENST00000461539 MT1EP04732 61 aa3.6□□□□□ -1.83
C9orf78-203ENST00000461539 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
C9orf78-203ENST00000461539 SPRR2EP22531 72 aa3.57□□□□□ -1.84
C9orf78-203ENST00000461539 SPRR2BP35325 72 aa3.57□□□□□ -1.84
C9orf78-203ENST00000461539 SPRR2AP35326 72 aa3.57□□□□□ -1.84
C9orf78-203ENST00000461539 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
C9orf78-203ENST00000461539 NEBP20929 6669 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms