RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 Q1T7F1 81 aa3.57□□□□□ -1.84
MSH2-204ENST00000461394 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
MSH2-204ENST00000461394 PRR15LQ9BU68 103 aa3.56□□□□□ -1.84
MSH2-204ENST00000461394 COX6B2Q6YFQ2 88 aa3.55□□□□□ -1.84
MSH2-204ENST00000461394 LOC100996750A0A140TA64 210 aa3.52□□□□□ -1.85
MSH2-204ENST00000461394 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
MSH2-204ENST00000461394 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
MSH2-204ENST00000461394 RBM12B-AS1Q9P1G2 102 aa3.51□□□□□ -1.85
MSH2-204ENST00000461394 A0A1B0GU69 56 aa3.5□□□□□ -1.85
MSH2-204ENST00000461394 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
MSH2-204ENST00000461394 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
MSH2-204ENST00000461394 A6NED7 52 aa3.48□□□□□ -1.85
MSH2-204ENST00000461394 Q5VV11 94 aa3.48□□□□□ -1.85
MSH2-204ENST00000461394 S4R3F8 94 aa3.48□□□□□ -1.85
MSH2-204ENST00000461394 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
MSH2-204ENST00000461394 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
MSH2-204ENST00000461394 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
MSH2-204ENST00000461394 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
MSH2-204ENST00000461394 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
MSH2-204ENST00000461394 HERC2O95714 4834 aa3.44□□□□□ -1.86
MSH2-204ENST00000461394 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
MSH2-204ENST00000461394 LCA10Q71F78 164 aa3.43□□□□□ -1.86
MSH2-204ENST00000461394 KRTAP19-1Q8IUB9 90 aa3.43□□□□□ -1.86
MSH2-204ENST00000461394 ABCA13Q86UQ4 5058 aa3.42□□□□□ -1.86
MSH2-204ENST00000461394 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
MSH2-204ENST00000461394 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
MSH2-204ENST00000461394 UQCR11O14957 56 aa3.38□□□□□ -1.87
MSH2-204ENST00000461394 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
MSH2-204ENST00000461394 LPAP08519 4548 aa3.38□□□□□ -1.87
MSH2-204ENST00000461394 CSAG1Q6PB30 78 aa3.37□□□□□ -1.87
MSH2-204ENST00000461394 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
MSH2-204ENST00000461394 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
MSH2-204ENST00000461394 A0A1B0GU33 70 aa3.35□□□□□ -1.87
MSH2-204ENST00000461394 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
MSH2-204ENST00000461394 A8MU10 97 aa3.33□□□□□ -1.88
MSH2-204ENST00000461394 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
MSH2-204ENST00000461394 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
MSH2-204ENST00000461394 LRP2P98164 4655 aa3.32□□□□□ -1.88
MSH2-204ENST00000461394 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
MSH2-204ENST00000461394 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
MSH2-204ENST00000461394 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
MSH2-204ENST00000461394 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
MSH2-204ENST00000461394 PMAIP1Q13794 54 aa3.28□□□□□ -1.88
MSH2-204ENST00000461394 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
MSH2-204ENST00000461394 H0YAA0 97 aa3.27□□□□□ -1.89
MSH2-204ENST00000461394 P0C880 135 aa3.27□□□□□ -1.89
MSH2-204ENST00000461394 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
MSH2-204ENST00000461394 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
MSH2-204ENST00000461394 A0A0D9SG42 100 aa3.25□□□□□ -1.89
MSH2-204ENST00000461394 K7ERS5 55 aa3.25□□□□□ -1.89
MSH2-204ENST00000461394 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
MSH2-204ENST00000461394 M0R2T5 61 aa3.23□□□□□ -1.89
MSH2-204ENST00000461394 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
MSH2-204ENST00000461394 M0QZ58 72 aa3.22□□□□□ -1.89
MSH2-204ENST00000461394 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
MSH2-204ENST00000461394 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
MSH2-204ENST00000461394 R4GN34 69 aa3.21□□□□□ -1.9
MSH2-204ENST00000461394 HERC1Q15751 4861 aa3.21□□□□□ -1.9
MSH2-204ENST00000461394 A6NN06 94 aa3.2□□□□□ -1.9
MSH2-204ENST00000461394 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
MSH2-204ENST00000461394 LINC01554Q52M75 96 aa3.19□□□□□ -1.9
MSH2-204ENST00000461394 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
MSH2-204ENST00000461394 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
MSH2-204ENST00000461394 LCE3BQ5TA77 95 aa3.15□□□□□ -1.91
MSH2-204ENST00000461394 MT1HP80294 61 aa3.14□□□□□ -1.91
MSH2-204ENST00000461394 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
MSH2-204ENST00000461394 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
MSH2-204ENST00000461394 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
MSH2-204ENST00000461394 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
MSH2-204ENST00000461394 MT3P25713 68 aa3.09□□□□□ -1.91
MSH2-204ENST00000461394 KRTAP10-10P60014 251 aa3.07□□□□□ -1.92
MSH2-204ENST00000461394 ROMO1P60602 79 aa3.07□□□□□ -1.92
MSH2-204ENST00000461394 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
MSH2-204ENST00000461394 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
MSH2-204ENST00000461394 MT2AP02795 61 aa3.03□□□□□ -1.92
MSH2-204ENST00000461394 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
MSH2-204ENST00000461394 MT1FP04733 61 aa3.02□□□□□ -1.93
MSH2-204ENST00000461394 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
MSH2-204ENST00000461394 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
MSH2-204ENST00000461394 MUC2Q02817 5179 aa3.01□□□□□ -1.93
MSH2-204ENST00000461394 KRTAP9-8Q9BYQ0 159 aa3□□□□□ -1.93
MSH2-204ENST00000461394 KRTAP4-8A0A0G2JLE6 195 aa2.98□□□□□ -1.93
MSH2-204ENST00000461394 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
MSH2-204ENST00000461394 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
MSH2-204ENST00000461394 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
MSH2-204ENST00000461394 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
MSH2-204ENST00000461394 FAT4Q6V0I7 4981 aa2.93□□□□□ -1.94
MSH2-204ENST00000461394 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
MSH2-204ENST00000461394 KRTAP19-8Q3LI54 63 aa2.89□□□□□ -1.95
MSH2-204ENST00000461394 TNP1P09430 55 aa2.87□□□□□ -1.95
MSH2-204ENST00000461394 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
MSH2-204ENST00000461394 MT1BP07438 61 aa2.85□□□□□ -1.95
MSH2-204ENST00000461394 KRTAP4-9Q9BYQ8 210 aa2.82□□□□□ -1.96
MSH2-204ENST00000461394 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
MSH2-204ENST00000461394 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
MSH2-204ENST00000461394 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
MSH2-204ENST00000461394 MT1XP80297 61 aa2.78□□□□□ -1.96
MSH2-204ENST00000461394 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
MSH2-204ENST00000461394 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
MSH2-204ENST00000461394 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms