RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 A8MUN3 132 aa7.7□□□□□ -1.18
SHANK1-205ENST00000461154 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
SHANK1-205ENST00000461154 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
SHANK1-205ENST00000461154 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
SHANK1-205ENST00000461154 LCE2BO14633 110 aa7.6□□□□□ -1.19
SHANK1-205ENST00000461154 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
SHANK1-205ENST00000461154 NDUFC1O43677 76 aa7.59□□□□□ -1.19
SHANK1-205ENST00000461154 SERP2Q8N6R1 65 aa7.56□□□□□ -1.2
SHANK1-205ENST00000461154 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
SHANK1-205ENST00000461154 USH2AO75445 5202 aa7.52□□□□□ -1.21
SHANK1-205ENST00000461154 SNURFQ9Y675 71 aa7.51□□□□□ -1.21
SHANK1-205ENST00000461154 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
SHANK1-205ENST00000461154 ACYP2P14621 99 aa7.45□□□□□ -1.22
SHANK1-205ENST00000461154 H0YAA0 97 aa7.43□□□□□ -1.22
SHANK1-205ENST00000461154 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
SHANK1-205ENST00000461154 COX7CP15954 63 aa7.4□□□□□ -1.22
SHANK1-205ENST00000461154 SPANXA2-OT1Q8N9U9 137 aa7.4□□□□□ -1.22
SHANK1-205ENST00000461154 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
SHANK1-205ENST00000461154 CRIPTQ9P021 101 aa7.37□□□□□ -1.23
SHANK1-205ENST00000461154 KRTAP19-6Q3LI70 58 aa7.34□□□□□ -1.23
SHANK1-205ENST00000461154 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
SHANK1-205ENST00000461154 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
SHANK1-205ENST00000461154 SPRR2GQ9BYE4 73 aa7.33□□□□□ -1.24
SHANK1-205ENST00000461154 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
SHANK1-205ENST00000461154 ANAPC13Q9BS18 74 aa7.3□□□□□ -1.24
SHANK1-205ENST00000461154 FCGBPQ9Y6R7 5405 aaPredicted RBP7.27□□□□□ -1.25
SHANK1-205ENST00000461154 Q5VV11 94 aa7.24□□□□□ -1.25
SHANK1-205ENST00000461154 KRTAP19-8Q3LI54 63 aa7.23□□□□□ -1.25
SHANK1-205ENST00000461154 H7BZZ5 65 aa7.21□□□□□ -1.26
SHANK1-205ENST00000461154 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
SHANK1-205ENST00000461154 P0C880 135 aa7.19□□□□□ -1.26
SHANK1-205ENST00000461154 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
SHANK1-205ENST00000461154 MT1BP07438 61 aa7.17□□□□□ -1.26
SHANK1-205ENST00000461154 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
SHANK1-205ENST00000461154 R4GN34 69 aa7.16□□□□□ -1.26
SHANK1-205ENST00000461154 COA5Q86WW8 74 aa7.15□□□□□ -1.26
SHANK1-205ENST00000461154 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
SHANK1-205ENST00000461154 M0QZ58 72 aa7.1□□□□□ -1.27
SHANK1-205ENST00000461154 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
SHANK1-205ENST00000461154 A6NN06 94 aa7.07□□□□□ -1.28
SHANK1-205ENST00000461154 ATP5EP56381 51 aaPredicted RBP7.01□□□□□ -1.29
SHANK1-205ENST00000461154 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
SHANK1-205ENST00000461154 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
SHANK1-205ENST00000461154 SEC61GP60059 68 aa6.98□□□□□ -1.29
SHANK1-205ENST00000461154 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
SHANK1-205ENST00000461154 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
SHANK1-205ENST00000461154 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
SHANK1-205ENST00000461154 TMEM258P61165 79 aa6.91□□□□□ -1.3
SHANK1-205ENST00000461154 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
SHANK1-205ENST00000461154 A0A1B0GU69 56 aa6.81□□□□□ -1.32
SHANK1-205ENST00000461154 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
SHANK1-205ENST00000461154 MT1XP80297 61 aa6.8□□□□□ -1.32
SHANK1-205ENST00000461154 A0A1B0GU33 70 aa6.79□□□□□ -1.32
SHANK1-205ENST00000461154 NEBP20929 6669 aa6.78□□□□□ -1.32
SHANK1-205ENST00000461154 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
SHANK1-205ENST00000461154 SPATA8Q6RVD6 105 aa6.71□□□□□ -1.34
SHANK1-205ENST00000461154 KRTAP20-1Q3LI63 56 aa6.7□□□□□ -1.34
SHANK1-205ENST00000461154 MUC12Q9UKN1 5478 aa6.69□□□□□ -1.34
SHANK1-205ENST00000461154 A0A0D9SG42 100 aa6.67□□□□□ -1.34
SHANK1-205ENST00000461154 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
SHANK1-205ENST00000461154 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
SHANK1-205ENST00000461154 SMIM26A0A096LP01 95 aa6.63□□□□□ -1.35
SHANK1-205ENST00000461154 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
SHANK1-205ENST00000461154 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
SHANK1-205ENST00000461154 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
SHANK1-205ENST00000461154 PCP4P48539 62 aa6.55□□□□□ -1.36
SHANK1-205ENST00000461154 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
SHANK1-205ENST00000461154 V9GYY9 64 aa6.51□□□□□ -1.37
SHANK1-205ENST00000461154 A8MU10 97 aa6.5□□□□□ -1.37
SHANK1-205ENST00000461154 UQCR11O14957 56 aa6.49□□□□□ -1.37
SHANK1-205ENST00000461154 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
SHANK1-205ENST00000461154 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
SHANK1-205ENST00000461154 KRTAP10-12P60413 245 aa6.47□□□□□ -1.37
SHANK1-205ENST00000461154 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
SHANK1-205ENST00000461154 Q1T7F1 81 aa6.44□□□□□ -1.38
SHANK1-205ENST00000461154 KMT2DO14686 5537 aa6.43□□□□□ -1.38
SHANK1-205ENST00000461154 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
SHANK1-205ENST00000461154 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
SHANK1-205ENST00000461154 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
SHANK1-205ENST00000461154 PSPHP1O15172 72 aa6.37□□□□□ -1.39
SHANK1-205ENST00000461154 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
SHANK1-205ENST00000461154 KRTAP2-3P0C7H8 128 aa6.35□□□□□ -1.39
SHANK1-205ENST00000461154 MIR22HGQ0VDD5 57 aa6.35□□□□□ -1.39
SHANK1-205ENST00000461154 KRTAP2-4Q9BYR9 128 aa6.35□□□□□ -1.39
SHANK1-205ENST00000461154 SPRR2EP22531 72 aa6.34□□□□□ -1.39
SHANK1-205ENST00000461154 SPRR2BP35325 72 aa6.34□□□□□ -1.39
SHANK1-205ENST00000461154 SPRR2AP35326 72 aa6.34□□□□□ -1.39
SHANK1-205ENST00000461154 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
SHANK1-205ENST00000461154 K7ERS5 55 aa6.23□□□□□ -1.41
SHANK1-205ENST00000461154 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
SHANK1-205ENST00000461154 A6NED7 52 aa6.2□□□□□ -1.42
SHANK1-205ENST00000461154 TNP1P09430 55 aa6.19□□□□□ -1.42
SHANK1-205ENST00000461154 SPRR2DP22532 72 aa6.13□□□□□ -1.43
SHANK1-205ENST00000461154 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
SHANK1-205ENST00000461154 KRTAP2-1Q9BYU5 128 aa6.12□□□□□ -1.43
SHANK1-205ENST00000461154 GPR98Q8WXG9 6306 aa6.08□□□□□ -1.44
SHANK1-205ENST00000461154 KRTAP19-7Q3SYF9 63 aa6.06□□□□□ -1.44
SHANK1-205ENST00000461154 MT1EP04732 61 aa6.01□□□□□ -1.45
SHANK1-205ENST00000461154 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
SHANK1-205ENST00000461154 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms