RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
ERCC3-205ENST00000460485 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
ERCC3-205ENST00000460485 MUC2Q02817 5179 aa7.55□□□□□ -1.2
ERCC3-205ENST00000460485 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
ERCC3-205ENST00000460485 LPAP08519 4548 aa7.53□□□□□ -1.2
ERCC3-205ENST00000460485 SPINK7P58062 85 aa7.52□□□□□ -1.21
ERCC3-205ENST00000460485 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
ERCC3-205ENST00000460485 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
ERCC3-205ENST00000460485 XP32Q5T750 250 aa7.48□□□□□ -1.21
ERCC3-205ENST00000460485 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
ERCC3-205ENST00000460485 COX6B2Q6YFQ2 88 aa7.45□□□□□ -1.22
ERCC3-205ENST00000460485 A6NED7 52 aa7.44□□□□□ -1.22
ERCC3-205ENST00000460485 A0A1B0GU69 56 aa7.43□□□□□ -1.22
ERCC3-205ENST00000460485 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
ERCC3-205ENST00000460485 SEC61GP60059 68 aa7.38□□□□□ -1.23
ERCC3-205ENST00000460485 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
ERCC3-205ENST00000460485 UQCR11O14957 56 aa7.31□□□□□ -1.24
ERCC3-205ENST00000460485 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
ERCC3-205ENST00000460485 FSIP2Q5CZC0 6907 aa7.27□□□□□ -1.25
ERCC3-205ENST00000460485 LCA10Q71F78 164 aa7.27□□□□□ -1.25
ERCC3-205ENST00000460485 SPATA8Q6RVD6 105 aa7.23□□□□□ -1.25
ERCC3-205ENST00000460485 SEC61BP60468 96 aaKnown RBP7.22□□□□□ -1.25
ERCC3-205ENST00000460485 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
ERCC3-205ENST00000460485 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
ERCC3-205ENST00000460485 S4R3F8 94 aa7.19□□□□□ -1.26
ERCC3-205ENST00000460485 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
ERCC3-205ENST00000460485 PMAIP1Q13794 54 aa7.16□□□□□ -1.26
ERCC3-205ENST00000460485 A8MU10 97 aa7.11□□□□□ -1.27
ERCC3-205ENST00000460485 A0A1B0GU33 70 aa7.1□□□□□ -1.27
ERCC3-205ENST00000460485 A6NN06 94 aa7.08□□□□□ -1.28
ERCC3-205ENST00000460485 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
ERCC3-205ENST00000460485 CSAG1Q6PB30 78 aa7.02□□□□□ -1.29
ERCC3-205ENST00000460485 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.29
ERCC3-205ENST00000460485 H0YAA0 97 aa6.98□□□□□ -1.29
ERCC3-205ENST00000460485 K7ERS5 55 aa6.95□□□□□ -1.3
ERCC3-205ENST00000460485 LCE2BO14633 110 aa6.93□□□□□ -1.3
ERCC3-205ENST00000460485 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
ERCC3-205ENST00000460485 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
ERCC3-205ENST00000460485 M0QZ58 72 aa6.85□□□□□ -1.31
ERCC3-205ENST00000460485 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
ERCC3-205ENST00000460485 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
ERCC3-205ENST00000460485 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
ERCC3-205ENST00000460485 P0C880 135 aa6.79□□□□□ -1.32
ERCC3-205ENST00000460485 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
ERCC3-205ENST00000460485 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
ERCC3-205ENST00000460485 MT1HP80294 61 aa6.73□□□□□ -1.33
ERCC3-205ENST00000460485 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
ERCC3-205ENST00000460485 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
ERCC3-205ENST00000460485 A0A0D9SG42 100 aa6.64□□□□□ -1.35
ERCC3-205ENST00000460485 R4GN34 69 aa6.64□□□□□ -1.35
ERCC3-205ENST00000460485 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
ERCC3-205ENST00000460485 ROMO1P60602 79 aa6.61□□□□□ -1.35
ERCC3-205ENST00000460485 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
ERCC3-205ENST00000460485 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
ERCC3-205ENST00000460485 M0R2T5 61 aa6.55□□□□□ -1.36
ERCC3-205ENST00000460485 PRAC1Q96KF2 57 aa6.54□□□□□ -1.36
ERCC3-205ENST00000460485 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
ERCC3-205ENST00000460485 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
ERCC3-205ENST00000460485 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
ERCC3-205ENST00000460485 SSPOA2VEC9 5147 aa6.46□□□□□ -1.37
ERCC3-205ENST00000460485 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
ERCC3-205ENST00000460485 USH2AO75445 5202 aa6.43□□□□□ -1.38
ERCC3-205ENST00000460485 SYNE2Q8WXH0 6885 aaKnown RBP6.41□□□□□ -1.38
ERCC3-205ENST00000460485 LINC01554Q52M75 96 aa6.41□□□□□ -1.38
ERCC3-205ENST00000460485 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
ERCC3-205ENST00000460485 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
ERCC3-205ENST00000460485 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
ERCC3-205ENST00000460485 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
ERCC3-205ENST00000460485 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
ERCC3-205ENST00000460485 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
ERCC3-205ENST00000460485 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
ERCC3-205ENST00000460485 MT2AP02795 61 aa6.15□□□□□ -1.42
ERCC3-205ENST00000460485 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
ERCC3-205ENST00000460485 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
ERCC3-205ENST00000460485 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
ERCC3-205ENST00000460485 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
ERCC3-205ENST00000460485 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
ERCC3-205ENST00000460485 MT1FP04733 61 aa6.09□□□□□ -1.43
ERCC3-205ENST00000460485 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
ERCC3-205ENST00000460485 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
ERCC3-205ENST00000460485 TNP1P09430 55 aa6.05□□□□□ -1.44
ERCC3-205ENST00000460485 NEBP20929 6669 aa6.05□□□□□ -1.44
ERCC3-205ENST00000460485 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
ERCC3-205ENST00000460485 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
ERCC3-205ENST00000460485 MT1BP07438 61 aa5.86□□□□□ -1.47
ERCC3-205ENST00000460485 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
ERCC3-205ENST00000460485 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
ERCC3-205ENST00000460485 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
ERCC3-205ENST00000460485 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
ERCC3-205ENST00000460485 MT1XP80297 61 aa5.74□□□□□ -1.49
ERCC3-205ENST00000460485 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
ERCC3-205ENST00000460485 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
ERCC3-205ENST00000460485 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
ERCC3-205ENST00000460485 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
ERCC3-205ENST00000460485 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
ERCC3-205ENST00000460485 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
ERCC3-205ENST00000460485 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
ERCC3-205ENST00000460485 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
ERCC3-205ENST00000460485 KMT2DO14686 5537 aa5.61□□□□□ -1.51
ERCC3-205ENST00000460485 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms