RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 COA5Q86WW8 74 aa7.15□□□□□ -1.26
PCNP-202ENST00000460231 ATP5EP56381 51 aaPredicted RBP7.12□□□□□ -1.27
PCNP-202ENST00000460231 ACYP2P14621 99 aa7.09□□□□□ -1.27
PCNP-202ENST00000460231 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
PCNP-202ENST00000460231 LCA10Q71F78 164 aa7.08□□□□□ -1.28
PCNP-202ENST00000460231 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
PCNP-202ENST00000460231 A8MUN3 132 aa7.04□□□□□ -1.28
PCNP-202ENST00000460231 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
PCNP-202ENST00000460231 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
PCNP-202ENST00000460231 CHKB-CPT1BH3BT56 60 aa6.99□□□□□ -1.29
PCNP-202ENST00000460231 S4R3F8 94 aa6.98□□□□□ -1.29
PCNP-202ENST00000460231 MT1HP80294 61 aa6.91□□□□□ -1.3
PCNP-202ENST00000460231 H3BS24 57 aa6.88□□□□□ -1.31
PCNP-202ENST00000460231 SMIM26A0A096LP01 95 aa6.87□□□□□ -1.31
PCNP-202ENST00000460231 PSPHP1O15172 72 aa6.82□□□□□ -1.32
PCNP-202ENST00000460231 Q1T7F1 81 aa6.8□□□□□ -1.32
PCNP-202ENST00000460231 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
PCNP-202ENST00000460231 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
PCNP-202ENST00000460231 P0C880 135 aa6.77□□□□□ -1.33
PCNP-202ENST00000460231 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
PCNP-202ENST00000460231 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
PCNP-202ENST00000460231 M0R2T5 61 aa6.74□□□□□ -1.33
PCNP-202ENST00000460231 Q5VV11 94 aa6.72□□□□□ -1.33
PCNP-202ENST00000460231 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
PCNP-202ENST00000460231 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
PCNP-202ENST00000460231 A0A1B0GU69 56 aa6.7□□□□□ -1.34
PCNP-202ENST00000460231 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
PCNP-202ENST00000460231 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.35
PCNP-202ENST00000460231 A8MU10 97 aa6.64□□□□□ -1.35
PCNP-202ENST00000460231 V9GYY9 64 aa6.62□□□□□ -1.35
PCNP-202ENST00000460231 MT1FP04733 61 aa6.62□□□□□ -1.35
PCNP-202ENST00000460231 MT2AP02795 61 aa6.61□□□□□ -1.35
PCNP-202ENST00000460231 SPATA8Q6RVD6 105 aa6.6□□□□□ -1.35
PCNP-202ENST00000460231 H0YAA0 97 aa6.59□□□□□ -1.35
PCNP-202ENST00000460231 SEC61GP60059 68 aa6.58□□□□□ -1.36
PCNP-202ENST00000460231 A0A1B0GU33 70 aa6.55□□□□□ -1.36
PCNP-202ENST00000460231 USH2AO75445 5202 aa6.51□□□□□ -1.37
PCNP-202ENST00000460231 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
PCNP-202ENST00000460231 A6NED7 52 aa6.49□□□□□ -1.37
PCNP-202ENST00000460231 M0QZ58 72 aa6.45□□□□□ -1.38
PCNP-202ENST00000460231 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
PCNP-202ENST00000460231 A0A0D9SG42 100 aa6.44□□□□□ -1.38
PCNP-202ENST00000460231 UQCR11O14957 56 aa6.44□□□□□ -1.38
PCNP-202ENST00000460231 R4GN34 69 aa6.42□□□□□ -1.38
PCNP-202ENST00000460231 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
PCNP-202ENST00000460231 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
PCNP-202ENST00000460231 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
PCNP-202ENST00000460231 BRK1Q8WUW1 75 aa6.4□□□□□ -1.38
PCNP-202ENST00000460231 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
PCNP-202ENST00000460231 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
PCNP-202ENST00000460231 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
PCNP-202ENST00000460231 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
PCNP-202ENST00000460231 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
PCNP-202ENST00000460231 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
PCNP-202ENST00000460231 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
PCNP-202ENST00000460231 CRIPTQ9P021 101 aa6.27□□□□□ -1.41
PCNP-202ENST00000460231 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
PCNP-202ENST00000460231 MT1BP07438 61 aa6.23□□□□□ -1.41
PCNP-202ENST00000460231 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
PCNP-202ENST00000460231 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
PCNP-202ENST00000460231 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
PCNP-202ENST00000460231 A6NN06 94 aa6.09□□□□□ -1.43
PCNP-202ENST00000460231 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
PCNP-202ENST00000460231 PMAIP1Q13794 54 aa6.01□□□□□ -1.45
PCNP-202ENST00000460231 MT1XP80297 61 aa6□□□□□ -1.45
PCNP-202ENST00000460231 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
PCNP-202ENST00000460231 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
PCNP-202ENST00000460231 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
PCNP-202ENST00000460231 KMT2DO14686 5537 aa5.97□□□□□ -1.45
PCNP-202ENST00000460231 K7ERS5 55 aa5.96□□□□□ -1.46
PCNP-202ENST00000460231 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
PCNP-202ENST00000460231 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
PCNP-202ENST00000460231 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
PCNP-202ENST00000460231 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
PCNP-202ENST00000460231 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.87□□□□□ -1.47
PCNP-202ENST00000460231 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
PCNP-202ENST00000460231 ROMO1P60602 79 aa5.84□□□□□ -1.47
PCNP-202ENST00000460231 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
PCNP-202ENST00000460231 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
PCNP-202ENST00000460231 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
PCNP-202ENST00000460231 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
PCNP-202ENST00000460231 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
PCNP-202ENST00000460231 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
PCNP-202ENST00000460231 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
PCNP-202ENST00000460231 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
PCNP-202ENST00000460231 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
PCNP-202ENST00000460231 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
PCNP-202ENST00000460231 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
PCNP-202ENST00000460231 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
PCNP-202ENST00000460231 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.51
PCNP-202ENST00000460231 TNP1P09430 55 aa5.65□□□□□ -1.51
PCNP-202ENST00000460231 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
PCNP-202ENST00000460231 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
PCNP-202ENST00000460231 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
PCNP-202ENST00000460231 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
PCNP-202ENST00000460231 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
PCNP-202ENST00000460231 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
PCNP-202ENST00000460231 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
PCNP-202ENST00000460231 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
PCNP-202ENST00000460231 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms