RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 C20orf197Q8N268 126 aa7.68□□□□□ -1.18
CD28-203ENST00000458610 KRTAP3-1Q9BYR8 98 aa7.68□□□□□ -1.18
CD28-203ENST00000458610 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
CD28-203ENST00000458610 S4R3F8 94 aa7.67□□□□□ -1.18
CD28-203ENST00000458610 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
CD28-203ENST00000458610 FSIP2Q5CZC0 6907 aa7.66□□□□□ -1.18
CD28-203ENST00000458610 MP68P56378 58 aa7.65□□□□□ -1.18
CD28-203ENST00000458610 H3BPC8 53 aa7.64□□□□□ -1.19
CD28-203ENST00000458610 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
CD28-203ENST00000458610 ATP5EP56381 51 aaPredicted RBP7.63□□□□□ -1.19
CD28-203ENST00000458610 RPS28P62857 69 aaKnown RBP7.63□□□□□ -1.19
CD28-203ENST00000458610 LINC00208Q96KT6 92 aa7.6□□□□□ -1.19
CD28-203ENST00000458610 LCA10Q71F78 164 aa7.58□□□□□ -1.2
CD28-203ENST00000458610 H7BZZ5 65 aa7.54□□□□□ -1.2
CD28-203ENST00000458610 A8MUN3 132 aa7.53□□□□□ -1.2
CD28-203ENST00000458610 SNURFQ9Y675 71 aa7.53□□□□□ -1.2
CD28-203ENST00000458610 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
CD28-203ENST00000458610 CYSTM1Q9H1C7 97 aa7.45□□□□□ -1.22
CD28-203ENST00000458610 USH2AO75445 5202 aa7.43□□□□□ -1.22
CD28-203ENST00000458610 SPANXA2-OT1Q8N9U9 137 aa7.41□□□□□ -1.22
CD28-203ENST00000458610 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
CD28-203ENST00000458610 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
CD28-203ENST00000458610 CRIPTQ9P021 101 aa7.34□□□□□ -1.23
CD28-203ENST00000458610 H0YAA0 97 aa7.33□□□□□ -1.24
CD28-203ENST00000458610 SSPOA2VEC9 5147 aa7.33□□□□□ -1.24
CD28-203ENST00000458610 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
CD28-203ENST00000458610 DMAC1Q96GE9 116 aa7.32□□□□□ -1.24
CD28-203ENST00000458610 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
CD28-203ENST00000458610 Q5VV11 94 aa7.25□□□□□ -1.25
CD28-203ENST00000458610 ACYP2P14621 99 aa7.24□□□□□ -1.25
CD28-203ENST00000458610 V9GYY9 64 aa7.23□□□□□ -1.25
CD28-203ENST00000458610 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
CD28-203ENST00000458610 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
CD28-203ENST00000458610 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
CD28-203ENST00000458610 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
CD28-203ENST00000458610 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
CD28-203ENST00000458610 SPTSSBQ8NFR3 76 aa7.17□□□□□ -1.26
CD28-203ENST00000458610 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
CD28-203ENST00000458610 MT1BP07438 61 aa7.15□□□□□ -1.26
CD28-203ENST00000458610 Q1T7F1 81 aa7.12□□□□□ -1.27
CD28-203ENST00000458610 CHKB-CPT1BH3BT56 60 aa7.11□□□□□ -1.27
CD28-203ENST00000458610 A6NN06 94 aa7.09□□□□□ -1.27
CD28-203ENST00000458610 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
CD28-203ENST00000458610 COA5Q86WW8 74 aa7.08□□□□□ -1.28
CD28-203ENST00000458610 R4GN34 69 aa7.07□□□□□ -1.28
CD28-203ENST00000458610 P0C880 135 aa7.03□□□□□ -1.28
CD28-203ENST00000458610 M0QZ58 72 aa7□□□□□ -1.29
CD28-203ENST00000458610 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
CD28-203ENST00000458610 PLAC4Q8WY50 150 aa6.98□□□□□ -1.29
CD28-203ENST00000458610 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
CD28-203ENST00000458610 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
CD28-203ENST00000458610 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
CD28-203ENST00000458610 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.31
CD28-203ENST00000458610 LINC01554Q52M75 96 aa6.87□□□□□ -1.31
CD28-203ENST00000458610 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
CD28-203ENST00000458610 PSPHP1O15172 72 aa6.85□□□□□ -1.31
CD28-203ENST00000458610 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
CD28-203ENST00000458610 SEC61GP60059 68 aa6.82□□□□□ -1.32
CD28-203ENST00000458610 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
CD28-203ENST00000458610 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
CD28-203ENST00000458610 A0A1B0GU69 56 aa6.78□□□□□ -1.32
CD28-203ENST00000458610 SVIPQ8NHG7 77 aa6.77□□□□□ -1.33
CD28-203ENST00000458610 A6NED7 52 aa6.75□□□□□ -1.33
CD28-203ENST00000458610 MT1XP80297 61 aa6.75□□□□□ -1.33
CD28-203ENST00000458610 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
CD28-203ENST00000458610 UQCR11O14957 56 aa6.67□□□□□ -1.34
CD28-203ENST00000458610 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
CD28-203ENST00000458610 A0A1B0GU33 70 aa6.6□□□□□ -1.35
CD28-203ENST00000458610 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
CD28-203ENST00000458610 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
CD28-203ENST00000458610 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
CD28-203ENST00000458610 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
CD28-203ENST00000458610 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
CD28-203ENST00000458610 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
CD28-203ENST00000458610 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
CD28-203ENST00000458610 A0A0D9SG42 100 aa6.49□□□□□ -1.37
CD28-203ENST00000458610 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
CD28-203ENST00000458610 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
CD28-203ENST00000458610 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
CD28-203ENST00000458610 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
CD28-203ENST00000458610 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
CD28-203ENST00000458610 NEBP20929 6669 aa6.42□□□□□ -1.38
CD28-203ENST00000458610 K7ERS5 55 aa6.4□□□□□ -1.38
CD28-203ENST00000458610 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
CD28-203ENST00000458610 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
CD28-203ENST00000458610 KMT2DO14686 5537 aa6.34□□□□□ -1.39
CD28-203ENST00000458610 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
CD28-203ENST00000458610 A8MU10 97 aa6.33□□□□□ -1.4
CD28-203ENST00000458610 SPRR2EP22531 72 aa6.31□□□□□ -1.4
CD28-203ENST00000458610 SPRR2BP35325 72 aa6.31□□□□□ -1.4
CD28-203ENST00000458610 SPRR2AP35326 72 aa6.31□□□□□ -1.4
CD28-203ENST00000458610 KTN1-AS1Q86SY8 53 aa6.28□□□□□ -1.4
CD28-203ENST00000458610 KRTAP20-1Q3LI63 56 aa6.27□□□□□ -1.41
CD28-203ENST00000458610 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
CD28-203ENST00000458610 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
CD28-203ENST00000458610 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
CD28-203ENST00000458610 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
CD28-203ENST00000458610 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
CD28-203ENST00000458610 H3BS24 57 aa6.14□□□□□ -1.43
CD28-203ENST00000458610 SPRR2DP22532 72 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 543.9 ms