RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
CDC42EP3-204ENST00000457889 CYP4F30PQ9H0H9 118 aa4.76□□□□□ -1.65
CDC42EP3-204ENST00000457889 SPANXA2-OT1Q8N9U9 137 aa4.75□□□□□ -1.65
CDC42EP3-204ENST00000457889 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
CDC42EP3-204ENST00000457889 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
CDC42EP3-204ENST00000457889 CYSTM1Q9H1C7 97 aa4.73□□□□□ -1.65
CDC42EP3-204ENST00000457889 FAM236DA0A1B0GTK5 79 aa4.7□□□□□ -1.66
CDC42EP3-204ENST00000457889 FAM236CP0DP71 79 aa4.7□□□□□ -1.66
CDC42EP3-204ENST00000457889 SPINK7P58062 85 aa4.7□□□□□ -1.66
CDC42EP3-204ENST00000457889 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
CDC42EP3-204ENST00000457889 PCOTHQ58A44 107 aa4.69□□□□□ -1.66
CDC42EP3-204ENST00000457889 A8MUN3 132 aa4.66□□□□□ -1.66
CDC42EP3-204ENST00000457889 HRES1P13985 223 aa4.66□□□□□ -1.66
CDC42EP3-204ENST00000457889 HERC1Q15751 4861 aa4.66□□□□□ -1.66
CDC42EP3-204ENST00000457889 HMCN2Q8NDA2 5059 aa4.64□□□□□ -1.67
CDC42EP3-204ENST00000457889 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
CDC42EP3-204ENST00000457889 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
CDC42EP3-204ENST00000457889 LRP2P98164 4655 aa4.61□□□□□ -1.67
CDC42EP3-204ENST00000457889 ACYP2P14621 99 aa4.61□□□□□ -1.67
CDC42EP3-204ENST00000457889 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
CDC42EP3-204ENST00000457889 SEC61GP60059 68 aa4.6□□□□□ -1.67
CDC42EP3-204ENST00000457889 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
CDC42EP3-204ENST00000457889 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
CDC42EP3-204ENST00000457889 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
CDC42EP3-204ENST00000457889 MPLKIPQ8TAP9 179 aa4.58□□□□□ -1.68
CDC42EP3-204ENST00000457889 RBM12B-AS1Q9P1G2 102 aa4.58□□□□□ -1.68
CDC42EP3-204ENST00000457889 LPAP08519 4548 aa4.58□□□□□ -1.68
CDC42EP3-204ENST00000457889 COA5Q86WW8 74 aa4.54□□□□□ -1.68
CDC42EP3-204ENST00000457889 CHKB-CPT1BH3BT56 60 aa4.52□□□□□ -1.69
CDC42EP3-204ENST00000457889 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
CDC42EP3-204ENST00000457889 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
CDC42EP3-204ENST00000457889 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
CDC42EP3-204ENST00000457889 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
CDC42EP3-204ENST00000457889 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
CDC42EP3-204ENST00000457889 S4R3F8 94 aa4.45□□□□□ -1.7
CDC42EP3-204ENST00000457889 V9GYY9 64 aa4.45□□□□□ -1.7
CDC42EP3-204ENST00000457889 UBR4Q5T4S7 5183 aa4.43□□□□□ -1.7
CDC42EP3-204ENST00000457889 Q1T7F1 81 aa4.41□□□□□ -1.7
CDC42EP3-204ENST00000457889 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
CDC42EP3-204ENST00000457889 LCA10Q71F78 164 aa4.4□□□□□ -1.71
CDC42EP3-204ENST00000457889 RNF213Q63HN8 5207 aa4.4□□□□□ -1.71
CDC42EP3-204ENST00000457889 CSAG1Q6PB30 78 aa4.38□□□□□ -1.71
CDC42EP3-204ENST00000457889 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
CDC42EP3-204ENST00000457889 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
CDC42EP3-204ENST00000457889 MUC2Q02817 5179 aa4.35□□□□□ -1.71
CDC42EP3-204ENST00000457889 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
CDC42EP3-204ENST00000457889 A0A1B0GU69 56 aa4.32□□□□□ -1.72
CDC42EP3-204ENST00000457889 H0YAA0 97 aa4.32□□□□□ -1.72
CDC42EP3-204ENST00000457889 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
CDC42EP3-204ENST00000457889 PSPHP1O15172 72 aa4.26□□□□□ -1.73
CDC42EP3-204ENST00000457889 MT1HP80294 61 aa4.25□□□□□ -1.73
CDC42EP3-204ENST00000457889 Q5VV11 94 aa4.25□□□□□ -1.73
CDC42EP3-204ENST00000457889 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
CDC42EP3-204ENST00000457889 M0R2T5 61 aa4.22□□□□□ -1.73
CDC42EP3-204ENST00000457889 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
CDC42EP3-204ENST00000457889 A0A1B0GU33 70 aa4.2□□□□□ -1.74
CDC42EP3-204ENST00000457889 UQCR11O14957 56 aa4.2□□□□□ -1.74
CDC42EP3-204ENST00000457889 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
CDC42EP3-204ENST00000457889 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CDC42EP3-204ENST00000457889 A6NED7 52 aa4.17□□□□□ -1.74
CDC42EP3-204ENST00000457889 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
CDC42EP3-204ENST00000457889 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
CDC42EP3-204ENST00000457889 M0QZ58 72 aa4.16□□□□□ -1.74
CDC42EP3-204ENST00000457889 P0C880 135 aa4.16□□□□□ -1.74
CDC42EP3-204ENST00000457889 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
CDC42EP3-204ENST00000457889 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
CDC42EP3-204ENST00000457889 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
CDC42EP3-204ENST00000457889 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
CDC42EP3-204ENST00000457889 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
CDC42EP3-204ENST00000457889 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
CDC42EP3-204ENST00000457889 R4GN34 69 aa4.11□□□□□ -1.75
CDC42EP3-204ENST00000457889 MT2AP02795 61 aa4.07□□□□□ -1.76
CDC42EP3-204ENST00000457889 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
CDC42EP3-204ENST00000457889 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
CDC42EP3-204ENST00000457889 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
CDC42EP3-204ENST00000457889 A6NN06 94 aa4.03□□□□□ -1.76
CDC42EP3-204ENST00000457889 MT1FP04733 61 aa4.03□□□□□ -1.76
CDC42EP3-204ENST00000457889 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
CDC42EP3-204ENST00000457889 K7ERS5 55 aa4.02□□□□□ -1.77
CDC42EP3-204ENST00000457889 PMAIP1Q13794 54 aa4□□□□□ -1.77
CDC42EP3-204ENST00000457889 A0A0D9SG42 100 aa3.98□□□□□ -1.77
CDC42EP3-204ENST00000457889 A8MU10 97 aa3.98□□□□□ -1.77
CDC42EP3-204ENST00000457889 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
CDC42EP3-204ENST00000457889 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
CDC42EP3-204ENST00000457889 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
CDC42EP3-204ENST00000457889 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
CDC42EP3-204ENST00000457889 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
CDC42EP3-204ENST00000457889 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
CDC42EP3-204ENST00000457889 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
CDC42EP3-204ENST00000457889 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
CDC42EP3-204ENST00000457889 MT1BP07438 61 aa3.82□□□□□ -1.8
CDC42EP3-204ENST00000457889 ROMO1P60602 79 aa3.79□□□□□ -1.8
CDC42EP3-204ENST00000457889 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
CDC42EP3-204ENST00000457889 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
CDC42EP3-204ENST00000457889 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
CDC42EP3-204ENST00000457889 USH2AO75445 5202 aa3.71□□□□□ -1.81
CDC42EP3-204ENST00000457889 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
CDC42EP3-204ENST00000457889 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
CDC42EP3-204ENST00000457889 MT1XP80297 61 aa3.69□□□□□ -1.82
CDC42EP3-204ENST00000457889 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms