RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 C5orf47Q569G3 176 aa6.28□□□□□ -1.4
SNHG17-208ENST00000456953 TRAV7A0A075B6U4 112 aa6.27□□□□□ -1.41
SNHG17-208ENST00000456953 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
SNHG17-208ENST00000456953 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
SNHG17-208ENST00000456953 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
SNHG17-208ENST00000456953 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
SNHG17-208ENST00000456953 CYP4F30PQ9H0H9 118 aa6.23□□□□□ -1.41
SNHG17-208ENST00000456953 H3BPC8 53 aa6.22□□□□□ -1.41
SNHG17-208ENST00000456953 KMT2DO14686 5537 aa6.21□□□□□ -1.42
SNHG17-208ENST00000456953 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
SNHG17-208ENST00000456953 C4orf26Q17RF5 130 aa6.18□□□□□ -1.42
SNHG17-208ENST00000456953 A6NN06 94 aa6.15□□□□□ -1.42
SNHG17-208ENST00000456953 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
SNHG17-208ENST00000456953 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
SNHG17-208ENST00000456953 C20orf197Q8N268 126 aa6.13□□□□□ -1.43
SNHG17-208ENST00000456953 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
SNHG17-208ENST00000456953 COX7CP15954 63 aa6.11□□□□□ -1.43
SNHG17-208ENST00000456953 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
SNHG17-208ENST00000456953 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
SNHG17-208ENST00000456953 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
SNHG17-208ENST00000456953 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
SNHG17-208ENST00000456953 KRTAP3-1Q9BYR8 98 aa6.04□□□□□ -1.44
SNHG17-208ENST00000456953 A8MUN3 132 aa6.02□□□□□ -1.45
SNHG17-208ENST00000456953 MT1BP07438 61 aa6□□□□□ -1.45
SNHG17-208ENST00000456953 NDUFC1O43677 76 aa5.99□□□□□ -1.45
SNHG17-208ENST00000456953 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
SNHG17-208ENST00000456953 Q5VV11 94 aa5.99□□□□□ -1.45
SNHG17-208ENST00000456953 S4R3F8 94 aa5.99□□□□□ -1.45
SNHG17-208ENST00000456953 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
SNHG17-208ENST00000456953 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
SNHG17-208ENST00000456953 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
SNHG17-208ENST00000456953 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
SNHG17-208ENST00000456953 LCA10Q71F78 164 aa5.93□□□□□ -1.46
SNHG17-208ENST00000456953 CYSTM1Q9H1C7 97 aa5.93□□□□□ -1.46
SNHG17-208ENST00000456953 H7BZZ5 65 aa5.92□□□□□ -1.46
SNHG17-208ENST00000456953 ACYP2P14621 99 aa5.92□□□□□ -1.46
SNHG17-208ENST00000456953 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
SNHG17-208ENST00000456953 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
SNHG17-208ENST00000456953 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
SNHG17-208ENST00000456953 SPRR2EP22531 72 aa5.86□□□□□ -1.47
SNHG17-208ENST00000456953 SPRR2BP35325 72 aa5.86□□□□□ -1.47
SNHG17-208ENST00000456953 SPRR2AP35326 72 aa5.86□□□□□ -1.47
SNHG17-208ENST00000456953 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
SNHG17-208ENST00000456953 KRTAP2-1Q9BYU5 128 aa5.86□□□□□ -1.47
SNHG17-208ENST00000456953 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
SNHG17-208ENST00000456953 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
SNHG17-208ENST00000456953 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
SNHG17-208ENST00000456953 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
SNHG17-208ENST00000456953 PCP4P48539 62 aa5.79□□□□□ -1.48
SNHG17-208ENST00000456953 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
SNHG17-208ENST00000456953 TMEM258P61165 79 aa5.78□□□□□ -1.48
SNHG17-208ENST00000456953 COA5Q86WW8 74 aa5.78□□□□□ -1.48
SNHG17-208ENST00000456953 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
SNHG17-208ENST00000456953 H0YAA0 97 aa5.69□□□□□ -1.5
SNHG17-208ENST00000456953 ADM2Q7Z4H4 148 aa5.68□□□□□ -1.5
SNHG17-208ENST00000456953 SPRR2DP22532 72 aa5.67□□□□□ -1.5
SNHG17-208ENST00000456953 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
SNHG17-208ENST00000456953 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
SNHG17-208ENST00000456953 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
SNHG17-208ENST00000456953 SEC61GP60059 68 aa5.59□□□□□ -1.51
SNHG17-208ENST00000456953 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
SNHG17-208ENST00000456953 P0C880 135 aa5.57□□□□□ -1.52
SNHG17-208ENST00000456953 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
SNHG17-208ENST00000456953 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
SNHG17-208ENST00000456953 R4GN34 69 aa5.52□□□□□ -1.53
SNHG17-208ENST00000456953 A0A1B0GU69 56 aa5.51□□□□□ -1.53
SNHG17-208ENST00000456953 MT1XP80297 61 aa5.51□□□□□ -1.53
SNHG17-208ENST00000456953 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
SNHG17-208ENST00000456953 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
SNHG17-208ENST00000456953 M0QZ58 72 aa5.49□□□□□ -1.53
SNHG17-208ENST00000456953 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
SNHG17-208ENST00000456953 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
SNHG17-208ENST00000456953 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
SNHG17-208ENST00000456953 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
SNHG17-208ENST00000456953 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
SNHG17-208ENST00000456953 SMIM26A0A096LP01 95 aa5.41□□□□□ -1.54
SNHG17-208ENST00000456953 A0A1B0GU33 70 aa5.41□□□□□ -1.54
SNHG17-208ENST00000456953 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
SNHG17-208ENST00000456953 V9GYY9 64 aa5.41□□□□□ -1.54
SNHG17-208ENST00000456953 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
SNHG17-208ENST00000456953 Q1T7F1 81 aa5.36□□□□□ -1.55
SNHG17-208ENST00000456953 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
SNHG17-208ENST00000456953 SPATA8Q6RVD6 105 aa5.33□□□□□ -1.56
SNHG17-208ENST00000456953 PSPHP1O15172 72 aa5.32□□□□□ -1.56
SNHG17-208ENST00000456953 A0A0D9SG42 100 aa5.29□□□□□ -1.56
SNHG17-208ENST00000456953 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
SNHG17-208ENST00000456953 UQCR11O14957 56 aa5.26□□□□□ -1.57
SNHG17-208ENST00000456953 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
SNHG17-208ENST00000456953 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
SNHG17-208ENST00000456953 A8MU10 97 aa5.21□□□□□ -1.58
SNHG17-208ENST00000456953 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
SNHG17-208ENST00000456953 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
SNHG17-208ENST00000456953 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
SNHG17-208ENST00000456953 A6NED7 52 aa5.17□□□□□ -1.58
SNHG17-208ENST00000456953 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
SNHG17-208ENST00000456953 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
SNHG17-208ENST00000456953 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
SNHG17-208ENST00000456953 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
SNHG17-208ENST00000456953 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
SNHG17-208ENST00000456953 K7ERS5 55 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms