RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 A8MU10 97 aa5.89□□□□□ -1.47
GTF3C2-206ENST00000454704 RETNLBQ9BQ08 111 aa5.86□□□□□ -1.47
GTF3C2-206ENST00000454704 UQCR11O14957 56 aa5.85□□□□□ -1.47
GTF3C2-206ENST00000454704 SEC61GP60059 68 aa5.85□□□□□ -1.47
GTF3C2-206ENST00000454704 SPATA8Q6RVD6 105 aa5.85□□□□□ -1.47
GTF3C2-206ENST00000454704 A8MUU9 505 aa5.82□□□□□ -1.48
GTF3C2-206ENST00000454704 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
GTF3C2-206ENST00000454704 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
GTF3C2-206ENST00000454704 LPAP08519 4548 aa5.78□□□□□ -1.48
GTF3C2-206ENST00000454704 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
GTF3C2-206ENST00000454704 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
GTF3C2-206ENST00000454704 MUC2Q02817 5179 aa5.68□□□□□ -1.5
GTF3C2-206ENST00000454704 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
GTF3C2-206ENST00000454704 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.51
GTF3C2-206ENST00000454704 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
GTF3C2-206ENST00000454704 A0A1B0GU33 70 aa5.58□□□□□ -1.52
GTF3C2-206ENST00000454704 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
GTF3C2-206ENST00000454704 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
GTF3C2-206ENST00000454704 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
GTF3C2-206ENST00000454704 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
GTF3C2-206ENST00000454704 H0YAA0 97 aa5.53□□□□□ -1.52
GTF3C2-206ENST00000454704 K7ERS5 55 aa5.52□□□□□ -1.53
GTF3C2-206ENST00000454704 MUC17Q685J3 4493 aa5.5□□□□□ -1.53
GTF3C2-206ENST00000454704 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
GTF3C2-206ENST00000454704 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
GTF3C2-206ENST00000454704 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
GTF3C2-206ENST00000454704 XP32Q5T750 250 aa5.45□□□□□ -1.54
GTF3C2-206ENST00000454704 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
GTF3C2-206ENST00000454704 ADM2Q7Z4H4 148 aa5.45□□□□□ -1.54
GTF3C2-206ENST00000454704 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
GTF3C2-206ENST00000454704 S4R3F8 94 aa5.42□□□□□ -1.54
GTF3C2-206ENST00000454704 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
GTF3C2-206ENST00000454704 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
GTF3C2-206ENST00000454704 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
GTF3C2-206ENST00000454704 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
GTF3C2-206ENST00000454704 TPRXLQ17RH7 258 aa5.35□□□□□ -1.55
GTF3C2-206ENST00000454704 KRTAP3-2Q9BYR7 98 aa5.31□□□□□ -1.56
GTF3C2-206ENST00000454704 ROMO1P60602 79 aa5.31□□□□□ -1.56
GTF3C2-206ENST00000454704 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
GTF3C2-206ENST00000454704 M0QZ58 72 aa5.24□□□□□ -1.57
GTF3C2-206ENST00000454704 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
GTF3C2-206ENST00000454704 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
GTF3C2-206ENST00000454704 P0C880 135 aa5.2□□□□□ -1.58
GTF3C2-206ENST00000454704 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
GTF3C2-206ENST00000454704 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
GTF3C2-206ENST00000454704 A0A0D9SG42 100 aa5.16□□□□□ -1.58
GTF3C2-206ENST00000454704 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
GTF3C2-206ENST00000454704 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
GTF3C2-206ENST00000454704 CRIPTQ9P021 101 aa5.11□□□□□ -1.59
GTF3C2-206ENST00000454704 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
GTF3C2-206ENST00000454704 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
GTF3C2-206ENST00000454704 MT1HP80294 61 aa5.07□□□□□ -1.6
GTF3C2-206ENST00000454704 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
GTF3C2-206ENST00000454704 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
GTF3C2-206ENST00000454704 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
GTF3C2-206ENST00000454704 R4GN34 69 aa5.01□□□□□ -1.61
GTF3C2-206ENST00000454704 M0R2T5 61 aa4.97□□□□□ -1.61
GTF3C2-206ENST00000454704 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
GTF3C2-206ENST00000454704 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
GTF3C2-206ENST00000454704 USH2AO75445 5202 aa4.88□□□□□ -1.63
GTF3C2-206ENST00000454704 H3BS24 57 aa4.87□□□□□ -1.63
GTF3C2-206ENST00000454704 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
GTF3C2-206ENST00000454704 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
GTF3C2-206ENST00000454704 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
GTF3C2-206ENST00000454704 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
GTF3C2-206ENST00000454704 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
GTF3C2-206ENST00000454704 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
GTF3C2-206ENST00000454704 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
GTF3C2-206ENST00000454704 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
GTF3C2-206ENST00000454704 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
GTF3C2-206ENST00000454704 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
GTF3C2-206ENST00000454704 MT2AP02795 61 aa4.68□□□□□ -1.66
GTF3C2-206ENST00000454704 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
GTF3C2-206ENST00000454704 PLAC4Q8WY50 150 aa4.67□□□□□ -1.66
GTF3C2-206ENST00000454704 LCE2BO14633 110 aa4.65□□□□□ -1.66
GTF3C2-206ENST00000454704 MT1FP04733 61 aa4.65□□□□□ -1.66
GTF3C2-206ENST00000454704 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
GTF3C2-206ENST00000454704 TNP1P09430 55 aa4.63□□□□□ -1.67
GTF3C2-206ENST00000454704 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
GTF3C2-206ENST00000454704 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
GTF3C2-206ENST00000454704 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
GTF3C2-206ENST00000454704 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
GTF3C2-206ENST00000454704 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
GTF3C2-206ENST00000454704 NEBP20929 6669 aa4.45□□□□□ -1.7
GTF3C2-206ENST00000454704 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
GTF3C2-206ENST00000454704 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
GTF3C2-206ENST00000454704 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.7
GTF3C2-206ENST00000454704 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
GTF3C2-206ENST00000454704 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
GTF3C2-206ENST00000454704 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
GTF3C2-206ENST00000454704 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
GTF3C2-206ENST00000454704 MT1BP07438 61 aa4.24□□□□□ -1.73
GTF3C2-206ENST00000454704 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
GTF3C2-206ENST00000454704 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.73
GTF3C2-206ENST00000454704 MDN1Q9NU22 5596 aa4.21□□□□□ -1.73
GTF3C2-206ENST00000454704 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
GTF3C2-206ENST00000454704 KMT2DO14686 5537 aa4.2□□□□□ -1.74
GTF3C2-206ENST00000454704 MT1XP80297 61 aa4.2□□□□□ -1.74
GTF3C2-206ENST00000454704 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
GTF3C2-206ENST00000454704 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 3168.5 ms