RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
HDLBP-226ENST00000453141 LINC01558Q9Y6Z2 57 aa4.27□□□□□ -1.73
HDLBP-226ENST00000453141 COA5Q86WW8 74 aa4.26□□□□□ -1.73
HDLBP-226ENST00000453141 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
HDLBP-226ENST00000453141 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
HDLBP-226ENST00000453141 CHKB-CPT1BH3BT56 60 aa4.25□□□□□ -1.73
HDLBP-226ENST00000453141 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
HDLBP-226ENST00000453141 PRR15LQ9BU68 103 aa4.24□□□□□ -1.73
HDLBP-226ENST00000453141 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
HDLBP-226ENST00000453141 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
HDLBP-226ENST00000453141 KRTAP16-1A8MUX0 517 aa4.22□□□□□ -1.73
HDLBP-226ENST00000453141 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
HDLBP-226ENST00000453141 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
HDLBP-226ENST00000453141 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
HDLBP-226ENST00000453141 A6NED7 52 aa4.19□□□□□ -1.74
HDLBP-226ENST00000453141 LCA10Q71F78 164 aa4.19□□□□□ -1.74
HDLBP-226ENST00000453141 A6NN06 94 aa4.18□□□□□ -1.74
HDLBP-226ENST00000453141 SEC61BP60468 96 aaKnown RBP4.18□□□□□ -1.74
HDLBP-226ENST00000453141 Q5W150 140 aa4.18□□□□□ -1.74
HDLBP-226ENST00000453141 KRTAP19-1Q8IUB9 90 aa4.18□□□□□ -1.74
HDLBP-226ENST00000453141 HRES1P13985 223 aa4.16□□□□□ -1.74
HDLBP-226ENST00000453141 ACYP2P14621 99 aa4.16□□□□□ -1.74
HDLBP-226ENST00000453141 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
HDLBP-226ENST00000453141 IGKV2-30P06310 120 aa4.15□□□□□ -1.75
HDLBP-226ENST00000453141 C9orf92A6NGG3 77 aa4.13□□□□□ -1.75
HDLBP-226ENST00000453141 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
HDLBP-226ENST00000453141 SPTSSBQ8NFR3 76 aa4.12□□□□□ -1.75
HDLBP-226ENST00000453141 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
HDLBP-226ENST00000453141 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
HDLBP-226ENST00000453141 A8MUU9 505 aa4.11□□□□□ -1.75
HDLBP-226ENST00000453141 DMAC1Q96GE9 116 aa4.11□□□□□ -1.75
HDLBP-226ENST00000453141 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
HDLBP-226ENST00000453141 A8MU10 97 aa4.1□□□□□ -1.75
HDLBP-226ENST00000453141 RBM12B-AS1Q9P1G2 102 aa4.09□□□□□ -1.75
HDLBP-226ENST00000453141 SPINK7P58062 85 aa4.07□□□□□ -1.76
HDLBP-226ENST00000453141 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
HDLBP-226ENST00000453141 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
HDLBP-226ENST00000453141 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
HDLBP-226ENST00000453141 A0A1B0GU69 56 aa4.03□□□□□ -1.76
HDLBP-226ENST00000453141 MT1HP80294 61 aa4.03□□□□□ -1.76
HDLBP-226ENST00000453141 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
HDLBP-226ENST00000453141 UQCR11O14957 56 aa4.02□□□□□ -1.77
HDLBP-226ENST00000453141 RPL37P61927 97 aaKnown RBP4.01□□□□□ -1.77
HDLBP-226ENST00000453141 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
HDLBP-226ENST00000453141 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
HDLBP-226ENST00000453141 M0R2T5 61 aa3.96□□□□□ -1.78
HDLBP-226ENST00000453141 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
HDLBP-226ENST00000453141 COX6B2Q6YFQ2 88 aa3.96□□□□□ -1.78
HDLBP-226ENST00000453141 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
HDLBP-226ENST00000453141 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
HDLBP-226ENST00000453141 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
HDLBP-226ENST00000453141 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
HDLBP-226ENST00000453141 KRTAP3-1Q9BYR8 98 aa3.87□□□□□ -1.79
HDLBP-226ENST00000453141 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
HDLBP-226ENST00000453141 USH2AO75445 5202 aa3.83□□□□□ -1.8
HDLBP-226ENST00000453141 S4R3F8 94 aa3.82□□□□□ -1.8
HDLBP-226ENST00000453141 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
HDLBP-226ENST00000453141 A0A1B0GU33 70 aa3.79□□□□□ -1.8
HDLBP-226ENST00000453141 CSAG1Q6PB30 78 aa3.79□□□□□ -1.8
HDLBP-226ENST00000453141 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
HDLBP-226ENST00000453141 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
HDLBP-226ENST00000453141 H1FX-AS1Q4G0G2 97 aa3.78□□□□□ -1.8
HDLBP-226ENST00000453141 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
HDLBP-226ENST00000453141 K7ERS5 55 aa3.77□□□□□ -1.81
HDLBP-226ENST00000453141 H0YAA0 97 aa3.76□□□□□ -1.81
HDLBP-226ENST00000453141 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
HDLBP-226ENST00000453141 MT2AP02795 61 aa3.74□□□□□ -1.81
HDLBP-226ENST00000453141 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
HDLBP-226ENST00000453141 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
HDLBP-226ENST00000453141 MT1FP04733 61 aa3.71□□□□□ -1.82
HDLBP-226ENST00000453141 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
HDLBP-226ENST00000453141 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
HDLBP-226ENST00000453141 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
HDLBP-226ENST00000453141 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
HDLBP-226ENST00000453141 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
HDLBP-226ENST00000453141 ROMO1P60602 79 aa3.66□□□□□ -1.82
HDLBP-226ENST00000453141 P0C880 135 aa3.62□□□□□ -1.83
HDLBP-226ENST00000453141 H3BS24 57 aa3.61□□□□□ -1.83
HDLBP-226ENST00000453141 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
HDLBP-226ENST00000453141 KRTAP13-4Q3LI77 160 aa3.58□□□□□ -1.84
HDLBP-226ENST00000453141 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
HDLBP-226ENST00000453141 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
HDLBP-226ENST00000453141 A0A0D9SG42 100 aa3.55□□□□□ -1.84
HDLBP-226ENST00000453141 M0QZ58 72 aa3.54□□□□□ -1.84
HDLBP-226ENST00000453141 CRIPTQ9P021 101 aa3.51□□□□□ -1.85
HDLBP-226ENST00000453141 R4GN34 69 aa3.51□□□□□ -1.85
HDLBP-226ENST00000453141 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
HDLBP-226ENST00000453141 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
HDLBP-226ENST00000453141 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
HDLBP-226ENST00000453141 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
HDLBP-226ENST00000453141 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
HDLBP-226ENST00000453141 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
HDLBP-226ENST00000453141 NEBP20929 6669 aa3.43□□□□□ -1.86
HDLBP-226ENST00000453141 MT1BP07438 61 aa3.37□□□□□ -1.87
HDLBP-226ENST00000453141 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
HDLBP-226ENST00000453141 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
HDLBP-226ENST00000453141 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
HDLBP-226ENST00000453141 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
HDLBP-226ENST00000453141 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
HDLBP-226ENST00000453141 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 1231.5 ms