RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 A0A1B0GU69 56 aa8.99□□□□□ -0.97
LMNA-208ENST00000448611 SEC61BP60468 96 aaKnown RBP8.97□□□□□ -0.97
LMNA-208ENST00000448611 A6NED7 52 aa8.93□□□□□ -0.98
LMNA-208ENST00000448611 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
LMNA-208ENST00000448611 LCA10Q71F78 164 aa8.9□□□□□ -0.99
LMNA-208ENST00000448611 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.99
LMNA-208ENST00000448611 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
LMNA-208ENST00000448611 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
LMNA-208ENST00000448611 S4R3F8 94 aa8.87□□□□□ -0.99
LMNA-208ENST00000448611 A8MU10 97 aa8.86□□□□□ -0.99
LMNA-208ENST00000448611 SEC61GP60059 68 aa8.84□□□□□ -0.99
LMNA-208ENST00000448611 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
LMNA-208ENST00000448611 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
LMNA-208ENST00000448611 MUC17Q685J3 4493 aa8.8□□□□□ -1
LMNA-208ENST00000448611 UBR4Q5T4S7 5183 aa8.8□□□□□ -1
LMNA-208ENST00000448611 UQCR11O14957 56 aa8.76□□□□□ -1.01
LMNA-208ENST00000448611 SPATA8Q6RVD6 105 aa8.72□□□□□ -1.01
LMNA-208ENST00000448611 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
LMNA-208ENST00000448611 MUC2Q02817 5179 aa8.68□□□□□ -1.02
LMNA-208ENST00000448611 A0A1B0GU33 70 aa8.66□□□□□ -1.02
LMNA-208ENST00000448611 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.02
LMNA-208ENST00000448611 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
LMNA-208ENST00000448611 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
LMNA-208ENST00000448611 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
LMNA-208ENST00000448611 RNF213Q63HN8 5207 aa8.63□□□□□ -1.03
LMNA-208ENST00000448611 H0YAA0 97 aa8.59□□□□□ -1.03
LMNA-208ENST00000448611 P0C880 135 aa8.53□□□□□ -1.04
LMNA-208ENST00000448611 PMAIP1Q13794 54 aa8.52□□□□□ -1.04
LMNA-208ENST00000448611 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.05
LMNA-208ENST00000448611 A6NN06 94 aa8.48□□□□□ -1.05
LMNA-208ENST00000448611 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
LMNA-208ENST00000448611 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
LMNA-208ENST00000448611 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
LMNA-208ENST00000448611 M0QZ58 72 aa8.29□□□□□ -1.08
LMNA-208ENST00000448611 FAT4Q6V0I7 4981 aa8.29□□□□□ -1.08
LMNA-208ENST00000448611 A0A0D9SG42 100 aa8.28□□□□□ -1.08
LMNA-208ENST00000448611 KTN1-AS1Q86SY8 53 aa8.24□□□□□ -1.09
LMNA-208ENST00000448611 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.09
LMNA-208ENST00000448611 K7ERS5 55 aa8.21□□□□□ -1.1
LMNA-208ENST00000448611 R4GN34 69 aa8.18□□□□□ -1.1
LMNA-208ENST00000448611 MT1HP80294 61 aa8.16□□□□□ -1.1
LMNA-208ENST00000448611 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
LMNA-208ENST00000448611 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
LMNA-208ENST00000448611 M0R2T5 61 aa8.11□□□□□ -1.11
LMNA-208ENST00000448611 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
LMNA-208ENST00000448611 LINC01554Q52M75 96 aa8.06□□□□□ -1.12
LMNA-208ENST00000448611 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
LMNA-208ENST00000448611 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
LMNA-208ENST00000448611 PRAC1Q96KF2 57 aa8□□□□□ -1.13
LMNA-208ENST00000448611 ROMO1P60602 79 aa7.95□□□□□ -1.14
LMNA-208ENST00000448611 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
LMNA-208ENST00000448611 MT2AP02795 61 aa7.88□□□□□ -1.15
LMNA-208ENST00000448611 MT1FP04733 61 aa7.85□□□□□ -1.15
LMNA-208ENST00000448611 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
LMNA-208ENST00000448611 KRTAP19-1Q8IUB9 90 aa7.81□□□□□ -1.16
LMNA-208ENST00000448611 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
LMNA-208ENST00000448611 KRTAP25-1Q3LHN0 102 aa7.74□□□□□ -1.17
LMNA-208ENST00000448611 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
LMNA-208ENST00000448611 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
LMNA-208ENST00000448611 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
LMNA-208ENST00000448611 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
LMNA-208ENST00000448611 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
LMNA-208ENST00000448611 MT1BP07438 61 aa7.48□□□□□ -1.21
LMNA-208ENST00000448611 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
LMNA-208ENST00000448611 KRTAP9-2Q9BYQ4 174 aa7.44□□□□□ -1.22
LMNA-208ENST00000448611 LCE2BO14633 110 aa7.39□□□□□ -1.23
LMNA-208ENST00000448611 FSIP2Q5CZC0 6907 aa7.36□□□□□ -1.23
LMNA-208ENST00000448611 TNP1P09430 55 aa7.35□□□□□ -1.23
LMNA-208ENST00000448611 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
LMNA-208ENST00000448611 MT1XP80297 61 aa7.29□□□□□ -1.24
LMNA-208ENST00000448611 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
LMNA-208ENST00000448611 USH2AO75445 5202 aa7.25□□□□□ -1.25
LMNA-208ENST00000448611 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
LMNA-208ENST00000448611 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
LMNA-208ENST00000448611 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
LMNA-208ENST00000448611 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
LMNA-208ENST00000448611 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
LMNA-208ENST00000448611 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
LMNA-208ENST00000448611 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
LMNA-208ENST00000448611 KRTAP9-6A0A140TA67 174 aa6.99□□□□□ -1.29
LMNA-208ENST00000448611 H3BS24 57 aa6.97□□□□□ -1.29
LMNA-208ENST00000448611 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
LMNA-208ENST00000448611 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
LMNA-208ENST00000448611 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.3
LMNA-208ENST00000448611 FCGBPQ9Y6R7 5405 aaPredicted RBP6.85□□□□□ -1.31
LMNA-208ENST00000448611 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
LMNA-208ENST00000448611 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
LMNA-208ENST00000448611 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
LMNA-208ENST00000448611 KMT2DO14686 5537 aa6.69□□□□□ -1.34
LMNA-208ENST00000448611 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
LMNA-208ENST00000448611 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
LMNA-208ENST00000448611 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
LMNA-208ENST00000448611 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
LMNA-208ENST00000448611 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
LMNA-208ENST00000448611 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
LMNA-208ENST00000448611 NDUFAF8A1L188 74 aa6.47□□□□□ -1.37
LMNA-208ENST00000448611 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
LMNA-208ENST00000448611 LUZP6Q538Z0 58 aa6.4□□□□□ -1.38
LMNA-208ENST00000448611 MT1EP04732 61 aa6.37□□□□□ -1.39
LMNA-208ENST00000448611 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms