RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
TM9SF4-204ENST00000442842 CYSTM1Q9H1C7 97 aa6.5□□□□□ -1.37
TM9SF4-204ENST00000442842 NDUFC1O43677 76 aa6.48□□□□□ -1.37
TM9SF4-204ENST00000442842 SPANXA2-OT1Q8N9U9 137 aa6.48□□□□□ -1.37
TM9SF4-204ENST00000442842 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
TM9SF4-204ENST00000442842 H7BZZ5 65 aa6.45□□□□□ -1.38
TM9SF4-204ENST00000442842 ACYP2P14621 99 aa6.45□□□□□ -1.38
TM9SF4-204ENST00000442842 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
TM9SF4-204ENST00000442842 MT2AP02795 61 aa6.43□□□□□ -1.38
TM9SF4-204ENST00000442842 SVIPQ8NHG7 77 aa6.41□□□□□ -1.38
TM9SF4-204ENST00000442842 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
TM9SF4-204ENST00000442842 MT1FP04733 61 aa6.39□□□□□ -1.39
TM9SF4-204ENST00000442842 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
TM9SF4-204ENST00000442842 COA5Q86WW8 74 aa6.33□□□□□ -1.4
TM9SF4-204ENST00000442842 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
TM9SF4-204ENST00000442842 ATP5EP56381 51 aaPredicted RBP6.27□□□□□ -1.41
TM9SF4-204ENST00000442842 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
TM9SF4-204ENST00000442842 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
TM9SF4-204ENST00000442842 TMEM258P61165 79 aa6.26□□□□□ -1.41
TM9SF4-204ENST00000442842 H0YAA0 97 aa6.25□□□□□ -1.41
TM9SF4-204ENST00000442842 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
TM9SF4-204ENST00000442842 PCP4P48539 62 aa6.22□□□□□ -1.41
TM9SF4-204ENST00000442842 P0C880 135 aa6.16□□□□□ -1.42
TM9SF4-204ENST00000442842 USH2AO75445 5202 aa6.15□□□□□ -1.42
TM9SF4-204ENST00000442842 LCE2BO14633 110 aa6.13□□□□□ -1.43
TM9SF4-204ENST00000442842 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
TM9SF4-204ENST00000442842 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
TM9SF4-204ENST00000442842 SEC61GP60059 68 aa6.08□□□□□ -1.44
TM9SF4-204ENST00000442842 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
TM9SF4-204ENST00000442842 R4GN34 69 aa6.08□□□□□ -1.44
TM9SF4-204ENST00000442842 M0QZ58 72 aa6.06□□□□□ -1.44
TM9SF4-204ENST00000442842 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
TM9SF4-204ENST00000442842 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
TM9SF4-204ENST00000442842 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
TM9SF4-204ENST00000442842 A0A1B0GU69 56 aa6□□□□□ -1.45
TM9SF4-204ENST00000442842 Q5VV11 94 aa6□□□□□ -1.45
TM9SF4-204ENST00000442842 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
TM9SF4-204ENST00000442842 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
TM9SF4-204ENST00000442842 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
TM9SF4-204ENST00000442842 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
TM9SF4-204ENST00000442842 MT1BP07438 61 aa5.94□□□□□ -1.46
TM9SF4-204ENST00000442842 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
TM9SF4-204ENST00000442842 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
TM9SF4-204ENST00000442842 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
TM9SF4-204ENST00000442842 A0A1B0GU33 70 aa5.91□□□□□ -1.46
TM9SF4-204ENST00000442842 SPATA8Q6RVD6 105 aa5.86□□□□□ -1.47
TM9SF4-204ENST00000442842 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
TM9SF4-204ENST00000442842 SMIM26A0A096LP01 95 aa5.84□□□□□ -1.47
TM9SF4-204ENST00000442842 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
TM9SF4-204ENST00000442842 A0A0D9SG42 100 aa5.83□□□□□ -1.48
TM9SF4-204ENST00000442842 V9GYY9 64 aa5.82□□□□□ -1.48
TM9SF4-204ENST00000442842 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
TM9SF4-204ENST00000442842 Q1T7F1 81 aa5.79□□□□□ -1.48
TM9SF4-204ENST00000442842 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
TM9SF4-204ENST00000442842 PSPHP1O15172 72 aa5.78□□□□□ -1.48
TM9SF4-204ENST00000442842 A6NN06 94 aa5.76□□□□□ -1.49
TM9SF4-204ENST00000442842 A8MU10 97 aa5.74□□□□□ -1.49
TM9SF4-204ENST00000442842 UQCR11O14957 56 aa5.72□□□□□ -1.49
TM9SF4-204ENST00000442842 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
TM9SF4-204ENST00000442842 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
TM9SF4-204ENST00000442842 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
TM9SF4-204ENST00000442842 MT1XP80297 61 aa5.67□□□□□ -1.5
TM9SF4-204ENST00000442842 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
TM9SF4-204ENST00000442842 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
TM9SF4-204ENST00000442842 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.5
TM9SF4-204ENST00000442842 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
TM9SF4-204ENST00000442842 A6NED7 52 aa5.61□□□□□ -1.51
TM9SF4-204ENST00000442842 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
TM9SF4-204ENST00000442842 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
TM9SF4-204ENST00000442842 K7ERS5 55 aa5.47□□□□□ -1.53
TM9SF4-204ENST00000442842 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
TM9SF4-204ENST00000442842 KMT2DO14686 5537 aa5.43□□□□□ -1.54
TM9SF4-204ENST00000442842 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
TM9SF4-204ENST00000442842 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
TM9SF4-204ENST00000442842 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
TM9SF4-204ENST00000442842 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
TM9SF4-204ENST00000442842 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
TM9SF4-204ENST00000442842 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
TM9SF4-204ENST00000442842 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
TM9SF4-204ENST00000442842 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
TM9SF4-204ENST00000442842 TNP1P09430 55 aa5.29□□□□□ -1.56
TM9SF4-204ENST00000442842 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
TM9SF4-204ENST00000442842 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
TM9SF4-204ENST00000442842 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
TM9SF4-204ENST00000442842 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.58
TM9SF4-204ENST00000442842 H3BS24 57 aa5.2□□□□□ -1.58
TM9SF4-204ENST00000442842 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
TM9SF4-204ENST00000442842 ROMO1P60602 79 aa5.17□□□□□ -1.58
TM9SF4-204ENST00000442842 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
TM9SF4-204ENST00000442842 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
TM9SF4-204ENST00000442842 MDN1Q9NU22 5596 aa5.15□□□□□ -1.58
TM9SF4-204ENST00000442842 PRO0628Q9UI54 55 aa5.08□□□□□ -1.6
TM9SF4-204ENST00000442842 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
TM9SF4-204ENST00000442842 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
TM9SF4-204ENST00000442842 SPRR2EP22531 72 aa5.04□□□□□ -1.6
TM9SF4-204ENST00000442842 SPRR2BP35325 72 aa5.04□□□□□ -1.6
TM9SF4-204ENST00000442842 SPRR2AP35326 72 aa5.04□□□□□ -1.6
TM9SF4-204ENST00000442842 MT1EP04732 61 aa5.01□□□□□ -1.61
TM9SF4-204ENST00000442842 NEBP20929 6669 aa4.99□□□□□ -1.61
TM9SF4-204ENST00000442842 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 5.9 ms