RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 MUC2Q02817 5179 aa7.82□□□□□ -1.16
MCF2L-217ENST00000441756 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
MCF2L-217ENST00000441756 LCA10Q71F78 164 aa7.81□□□□□ -1.16
MCF2L-217ENST00000441756 CSAG1Q6PB30 78 aa7.76□□□□□ -1.17
MCF2L-217ENST00000441756 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
MCF2L-217ENST00000441756 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
MCF2L-217ENST00000441756 M0R2T5 61 aa7.71□□□□□ -1.18
MCF2L-217ENST00000441756 MT1HP80294 61 aa7.71□□□□□ -1.18
MCF2L-217ENST00000441756 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
MCF2L-217ENST00000441756 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
MCF2L-217ENST00000441756 SMIM26A0A096LP01 95 aa7.62□□□□□ -1.19
MCF2L-217ENST00000441756 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
MCF2L-217ENST00000441756 H0YAA0 97 aa7.58□□□□□ -1.2
MCF2L-217ENST00000441756 V9GYY9 64 aa7.58□□□□□ -1.2
MCF2L-217ENST00000441756 SEC61GP60059 68 aa7.57□□□□□ -1.2
MCF2L-217ENST00000441756 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
MCF2L-217ENST00000441756 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-217ENST00000441756 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
MCF2L-217ENST00000441756 LINC01558Q9Y6Z2 57 aa7.52□□□□□ -1.21
MCF2L-217ENST00000441756 A0A1B0GU69 56 aa7.5□□□□□ -1.21
MCF2L-217ENST00000441756 Q1T7F1 81 aa7.5□□□□□ -1.21
MCF2L-217ENST00000441756 ADM2Q7Z4H4 148 aa7.49□□□□□ -1.21
MCF2L-217ENST00000441756 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
MCF2L-217ENST00000441756 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
MCF2L-217ENST00000441756 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
MCF2L-217ENST00000441756 P0C880 135 aa7.37□□□□□ -1.23
MCF2L-217ENST00000441756 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
MCF2L-217ENST00000441756 MT2AP02795 61 aa7.36□□□□□ -1.23
MCF2L-217ENST00000441756 PSPHP1O15172 72 aa7.35□□□□□ -1.23
MCF2L-217ENST00000441756 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
MCF2L-217ENST00000441756 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
MCF2L-217ENST00000441756 A0A1B0GU33 70 aa7.32□□□□□ -1.24
MCF2L-217ENST00000441756 MT1FP04733 61 aa7.29□□□□□ -1.24
MCF2L-217ENST00000441756 R4GN34 69 aa7.29□□□□□ -1.24
MCF2L-217ENST00000441756 Q5VV11 94 aa7.28□□□□□ -1.24
MCF2L-217ENST00000441756 M0QZ58 72 aa7.27□□□□□ -1.25
MCF2L-217ENST00000441756 UQCR11O14957 56 aa7.25□□□□□ -1.25
MCF2L-217ENST00000441756 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
MCF2L-217ENST00000441756 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
MCF2L-217ENST00000441756 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
MCF2L-217ENST00000441756 A6NED7 52 aa7.18□□□□□ -1.26
MCF2L-217ENST00000441756 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.26
MCF2L-217ENST00000441756 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
MCF2L-217ENST00000441756 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
MCF2L-217ENST00000441756 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
MCF2L-217ENST00000441756 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
MCF2L-217ENST00000441756 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
MCF2L-217ENST00000441756 LINC01554Q52M75 96 aa7.09□□□□□ -1.27
MCF2L-217ENST00000441756 A0A0D9SG42 100 aa7.04□□□□□ -1.28
MCF2L-217ENST00000441756 A6NN06 94 aa7.03□□□□□ -1.28
MCF2L-217ENST00000441756 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
MCF2L-217ENST00000441756 A8MU10 97 aa7□□□□□ -1.29
MCF2L-217ENST00000441756 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
MCF2L-217ENST00000441756 K7ERS5 55 aa6.94□□□□□ -1.3
MCF2L-217ENST00000441756 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
MCF2L-217ENST00000441756 PLAC4Q8WY50 150 aa6.94□□□□□ -1.3
MCF2L-217ENST00000441756 LCE2BO14633 110 aa6.93□□□□□ -1.3
MCF2L-217ENST00000441756 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
MCF2L-217ENST00000441756 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
MCF2L-217ENST00000441756 MT1BP07438 61 aa6.87□□□□□ -1.31
MCF2L-217ENST00000441756 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
MCF2L-217ENST00000441756 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
MCF2L-217ENST00000441756 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
MCF2L-217ENST00000441756 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
MCF2L-217ENST00000441756 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
MCF2L-217ENST00000441756 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
MCF2L-217ENST00000441756 USH2AO75445 5202 aa6.66□□□□□ -1.34
MCF2L-217ENST00000441756 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
MCF2L-217ENST00000441756 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
MCF2L-217ENST00000441756 MT1XP80297 61 aa6.6□□□□□ -1.35
MCF2L-217ENST00000441756 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
MCF2L-217ENST00000441756 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
MCF2L-217ENST00000441756 ROMO1P60602 79 aa6.54□□□□□ -1.36
MCF2L-217ENST00000441756 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
MCF2L-217ENST00000441756 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.37
MCF2L-217ENST00000441756 TNP1P09430 55 aa6.45□□□□□ -1.38
MCF2L-217ENST00000441756 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
MCF2L-217ENST00000441756 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
MCF2L-217ENST00000441756 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
MCF2L-217ENST00000441756 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
MCF2L-217ENST00000441756 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
MCF2L-217ENST00000441756 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
MCF2L-217ENST00000441756 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
MCF2L-217ENST00000441756 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
MCF2L-217ENST00000441756 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
MCF2L-217ENST00000441756 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
MCF2L-217ENST00000441756 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
MCF2L-217ENST00000441756 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
MCF2L-217ENST00000441756 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
MCF2L-217ENST00000441756 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
MCF2L-217ENST00000441756 NEBP20929 6669 aa5.98□□□□□ -1.45
MCF2L-217ENST00000441756 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
MCF2L-217ENST00000441756 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
MCF2L-217ENST00000441756 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
MCF2L-217ENST00000441756 KMT2DO14686 5537 aa5.91□□□□□ -1.46
MCF2L-217ENST00000441756 SVIPQ8NHG7 77 aa5.91□□□□□ -1.46
MCF2L-217ENST00000441756 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
MCF2L-217ENST00000441756 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
MCF2L-217ENST00000441756 KRTAP5-9P26371 169 aa5.86□□□□□ -1.47
MCF2L-217ENST00000441756 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms