RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 LINC01558Q9Y6Z2 57 aa8.54□□□□□ -1.04
TMEM39B-203ENST00000441402 S4R3F8 94 aa8.46□□□□□ -1.05
TMEM39B-203ENST00000441402 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
TMEM39B-203ENST00000441402 LCA10Q71F78 164 aa8.44□□□□□ -1.06
TMEM39B-203ENST00000441402 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
TMEM39B-203ENST00000441402 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
TMEM39B-203ENST00000441402 PSPHP1O15172 72 aa8.39□□□□□ -1.07
TMEM39B-203ENST00000441402 PRR15LQ9BU68 103 aa8.39□□□□□ -1.07
TMEM39B-203ENST00000441402 Q5VV11 94 aa8.38□□□□□ -1.07
TMEM39B-203ENST00000441402 A0A1B0GU69 56 aa8.35□□□□□ -1.07
TMEM39B-203ENST00000441402 SEC61GP60059 68 aa8.3□□□□□ -1.08
TMEM39B-203ENST00000441402 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
TMEM39B-203ENST00000441402 MUC2Q02817 5179 aa8.2□□□□□ -1.1
TMEM39B-203ENST00000441402 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
TMEM39B-203ENST00000441402 H0YAA0 97 aa8.18□□□□□ -1.1
TMEM39B-203ENST00000441402 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
TMEM39B-203ENST00000441402 A6NED7 52 aa8.15□□□□□ -1.1
TMEM39B-203ENST00000441402 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.1
TMEM39B-203ENST00000441402 UQCR11O14957 56 aa8.13□□□□□ -1.11
TMEM39B-203ENST00000441402 FLGP20930 4061 aaPredicted RBP8.13□□□□□ -1.11
TMEM39B-203ENST00000441402 A0A1B0GU33 70 aa8.1□□□□□ -1.11
TMEM39B-203ENST00000441402 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
TMEM39B-203ENST00000441402 RNF213Q63HN8 5207 aa8.1□□□□□ -1.11
TMEM39B-203ENST00000441402 ADM2Q7Z4H4 148 aa8.08□□□□□ -1.12
TMEM39B-203ENST00000441402 BRK1Q8WUW1 75 aa8.08□□□□□ -1.12
TMEM39B-203ENST00000441402 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
TMEM39B-203ENST00000441402 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
TMEM39B-203ENST00000441402 P0C880 135 aa8.04□□□□□ -1.12
TMEM39B-203ENST00000441402 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
TMEM39B-203ENST00000441402 MT1HP80294 61 aa8□□□□□ -1.13
TMEM39B-203ENST00000441402 PRO0628Q9UI54 55 aa7.98□□□□□ -1.13
TMEM39B-203ENST00000441402 A8MU10 97 aa7.96□□□□□ -1.14
TMEM39B-203ENST00000441402 M0QZ58 72 aa7.91□□□□□ -1.14
TMEM39B-203ENST00000441402 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.14
TMEM39B-203ENST00000441402 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
TMEM39B-203ENST00000441402 M0R2T5 61 aa7.88□□□□□ -1.15
TMEM39B-203ENST00000441402 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
TMEM39B-203ENST00000441402 CRIPTQ9P021 101 aa7.8□□□□□ -1.16
TMEM39B-203ENST00000441402 R4GN34 69 aa7.8□□□□□ -1.16
TMEM39B-203ENST00000441402 KRTAP9-8Q9BYQ0 159 aa7.74□□□□□ -1.17
TMEM39B-203ENST00000441402 A0A0D9SG42 100 aa7.71□□□□□ -1.18
TMEM39B-203ENST00000441402 MT2AP02795 61 aa7.69□□□□□ -1.18
TMEM39B-203ENST00000441402 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
TMEM39B-203ENST00000441402 PMAIP1Q13794 54 aa7.68□□□□□ -1.18
TMEM39B-203ENST00000441402 K7ERS5 55 aa7.66□□□□□ -1.18
TMEM39B-203ENST00000441402 A6NN06 94 aa7.64□□□□□ -1.19
TMEM39B-203ENST00000441402 MT1FP04733 61 aa7.64□□□□□ -1.19
TMEM39B-203ENST00000441402 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
TMEM39B-203ENST00000441402 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
TMEM39B-203ENST00000441402 SPRR2GQ9BYE4 73 aa7.61□□□□□ -1.19
TMEM39B-203ENST00000441402 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
TMEM39B-203ENST00000441402 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
TMEM39B-203ENST00000441402 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
TMEM39B-203ENST00000441402 SPINT4Q6UDR6 99 aa7.54□□□□□ -1.2
TMEM39B-203ENST00000441402 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
TMEM39B-203ENST00000441402 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
TMEM39B-203ENST00000441402 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
TMEM39B-203ENST00000441402 ROMO1P60602 79 aa7.35□□□□□ -1.23
TMEM39B-203ENST00000441402 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
TMEM39B-203ENST00000441402 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
TMEM39B-203ENST00000441402 MT1BP07438 61 aa7.27□□□□□ -1.25
TMEM39B-203ENST00000441402 LCE2BO14633 110 aa7.22□□□□□ -1.25
TMEM39B-203ENST00000441402 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
TMEM39B-203ENST00000441402 PRAC1Q96KF2 57 aa7.13□□□□□ -1.27
TMEM39B-203ENST00000441402 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
TMEM39B-203ENST00000441402 MT1XP80297 61 aa7.04□□□□□ -1.28
TMEM39B-203ENST00000441402 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
TMEM39B-203ENST00000441402 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
TMEM39B-203ENST00000441402 TNP1P09430 55 aa6.99□□□□□ -1.29
TMEM39B-203ENST00000441402 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
TMEM39B-203ENST00000441402 USH2AO75445 5202 aa6.9□□□□□ -1.3
TMEM39B-203ENST00000441402 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
TMEM39B-203ENST00000441402 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
TMEM39B-203ENST00000441402 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
TMEM39B-203ENST00000441402 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
TMEM39B-203ENST00000441402 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
TMEM39B-203ENST00000441402 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
TMEM39B-203ENST00000441402 KRTAP10-12P60413 245 aa6.7□□□□□ -1.34
TMEM39B-203ENST00000441402 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
TMEM39B-203ENST00000441402 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
TMEM39B-203ENST00000441402 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
TMEM39B-203ENST00000441402 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
TMEM39B-203ENST00000441402 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
TMEM39B-203ENST00000441402 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
TMEM39B-203ENST00000441402 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
TMEM39B-203ENST00000441402 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
TMEM39B-203ENST00000441402 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
TMEM39B-203ENST00000441402 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
TMEM39B-203ENST00000441402 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
TMEM39B-203ENST00000441402 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
TMEM39B-203ENST00000441402 KMT2DO14686 5537 aa6.27□□□□□ -1.41
TMEM39B-203ENST00000441402 MT1EP04732 61 aa6.16□□□□□ -1.42
TMEM39B-203ENST00000441402 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
TMEM39B-203ENST00000441402 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
TMEM39B-203ENST00000441402 KRTAP9-7A8MTY7 169 aa6.08□□□□□ -1.44
TMEM39B-203ENST00000441402 MT1LQ93083 61 aa6.05□□□□□ -1.44
TMEM39B-203ENST00000441402 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
TMEM39B-203ENST00000441402 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
TMEM39B-203ENST00000441402 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
TMEM39B-203ENST00000441402 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms