RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PCP4P48539 62 aa6.96□□□□□ -1.3
LINC01088-201ENST00000437737 RBM12B-AS1Q9P1G2 102 aa6.96□□□□□ -1.3
LINC01088-201ENST00000437737 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
LINC01088-201ENST00000437737 C7orf65Q6ZTY9 151 aa6.94□□□□□ -1.3
LINC01088-201ENST00000437737 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
LINC01088-201ENST00000437737 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
LINC01088-201ENST00000437737 SPINK7P58062 85 aa6.92□□□□□ -1.3
LINC01088-201ENST00000437737 CYP4F30PQ9H0H9 118 aa6.91□□□□□ -1.3
LINC01088-201ENST00000437737 KLKP1Q107X0 134 aa6.9□□□□□ -1.3
LINC01088-201ENST00000437737 NDUFC1O43677 76 aa6.88□□□□□ -1.31
LINC01088-201ENST00000437737 HRES1P13985 223 aa6.88□□□□□ -1.31
LINC01088-201ENST00000437737 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
LINC01088-201ENST00000437737 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
LINC01088-201ENST00000437737 CCDC179H3BU77 68 aa6.84□□□□□ -1.31
LINC01088-201ENST00000437737 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
LINC01088-201ENST00000437737 KRTAP20-1Q3LI63 56 aa6.76□□□□□ -1.33
LINC01088-201ENST00000437737 SPANXA2-OT1Q8N9U9 137 aa6.76□□□□□ -1.33
LINC01088-201ENST00000437737 H7BZZ5 65 aa6.75□□□□□ -1.33
LINC01088-201ENST00000437737 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
LINC01088-201ENST00000437737 A8MUN3 132 aa6.72□□□□□ -1.33
LINC01088-201ENST00000437737 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
LINC01088-201ENST00000437737 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
LINC01088-201ENST00000437737 TMEM258P61165 79 aa6.69□□□□□ -1.34
LINC01088-201ENST00000437737 ACYP2P14621 99 aa6.66□□□□□ -1.34
LINC01088-201ENST00000437737 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
LINC01088-201ENST00000437737 H1FX-AS1Q4G0G2 97 aa6.63□□□□□ -1.35
LINC01088-201ENST00000437737 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
LINC01088-201ENST00000437737 A6NN06 94 aa6.57□□□□□ -1.36
LINC01088-201ENST00000437737 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
LINC01088-201ENST00000437737 S4R3F8 94 aa6.53□□□□□ -1.36
LINC01088-201ENST00000437737 SPTSSBQ8NFR3 76 aa6.52□□□□□ -1.37
LINC01088-201ENST00000437737 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
LINC01088-201ENST00000437737 COA5Q86WW8 74 aa6.5□□□□□ -1.37
LINC01088-201ENST00000437737 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
LINC01088-201ENST00000437737 KMT2DO14686 5537 aa6.47□□□□□ -1.37
LINC01088-201ENST00000437737 KRTAP5-9P26371 169 aa6.47□□□□□ -1.37
LINC01088-201ENST00000437737 LCA10Q71F78 164 aa6.46□□□□□ -1.38
LINC01088-201ENST00000437737 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
LINC01088-201ENST00000437737 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
LINC01088-201ENST00000437737 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
LINC01088-201ENST00000437737 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
LINC01088-201ENST00000437737 MT1BP07438 61 aa6.4□□□□□ -1.38
LINC01088-201ENST00000437737 Q5VV11 94 aa6.4□□□□□ -1.38
LINC01088-201ENST00000437737 KRTAP3-3Q9BYR6 98 aa6.39□□□□□ -1.39
LINC01088-201ENST00000437737 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
LINC01088-201ENST00000437737 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
LINC01088-201ENST00000437737 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
LINC01088-201ENST00000437737 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
LINC01088-201ENST00000437737 H0YAA0 97 aa6.29□□□□□ -1.4
LINC01088-201ENST00000437737 SEC61GP60059 68 aa6.29□□□□□ -1.4
LINC01088-201ENST00000437737 V9GYY9 64 aa6.27□□□□□ -1.41
LINC01088-201ENST00000437737 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
LINC01088-201ENST00000437737 SPRR2EP22531 72 aa6.24□□□□□ -1.41
LINC01088-201ENST00000437737 SPRR2BP35325 72 aa6.24□□□□□ -1.41
LINC01088-201ENST00000437737 SPRR2AP35326 72 aa6.24□□□□□ -1.41
LINC01088-201ENST00000437737 GPR98Q8WXG9 6306 aa6.24□□□□□ -1.41
LINC01088-201ENST00000437737 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
LINC01088-201ENST00000437737 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
LINC01088-201ENST00000437737 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
LINC01088-201ENST00000437737 A0A1B0GU69 56 aa6.2□□□□□ -1.42
LINC01088-201ENST00000437737 Q1T7F1 81 aa6.2□□□□□ -1.42
LINC01088-201ENST00000437737 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
LINC01088-201ENST00000437737 KRTAP2-2Q9BYT5 123 aa6.2□□□□□ -1.42
LINC01088-201ENST00000437737 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
LINC01088-201ENST00000437737 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
LINC01088-201ENST00000437737 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
LINC01088-201ENST00000437737 P0C880 135 aa6.08□□□□□ -1.44
LINC01088-201ENST00000437737 A0A1B0GU33 70 aa6.06□□□□□ -1.44
LINC01088-201ENST00000437737 LCE1AQ5T7P2 110 aa6.05□□□□□ -1.44
LINC01088-201ENST00000437737 M0QZ58 72 aa6.04□□□□□ -1.44
LINC01088-201ENST00000437737 PSPHP1O15172 72 aa6.04□□□□□ -1.44
LINC01088-201ENST00000437737 SPRR2DP22532 72 aa6.04□□□□□ -1.44
LINC01088-201ENST00000437737 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
LINC01088-201ENST00000437737 R4GN34 69 aa6.03□□□□□ -1.44
LINC01088-201ENST00000437737 UQCR11O14957 56 aa6□□□□□ -1.45
LINC01088-201ENST00000437737 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
LINC01088-201ENST00000437737 A6NED7 52 aa5.92□□□□□ -1.46
LINC01088-201ENST00000437737 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
LINC01088-201ENST00000437737 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
LINC01088-201ENST00000437737 SPATA8Q6RVD6 105 aa5.89□□□□□ -1.47
LINC01088-201ENST00000437737 MT1XP80297 61 aa5.88□□□□□ -1.47
LINC01088-201ENST00000437737 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
LINC01088-201ENST00000437737 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
LINC01088-201ENST00000437737 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
LINC01088-201ENST00000437737 A0A0D9SG42 100 aa5.81□□□□□ -1.48
LINC01088-201ENST00000437737 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
LINC01088-201ENST00000437737 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
LINC01088-201ENST00000437737 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
LINC01088-201ENST00000437737 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
LINC01088-201ENST00000437737 A8MU10 97 aa5.76□□□□□ -1.49
LINC01088-201ENST00000437737 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
LINC01088-201ENST00000437737 K7ERS5 55 aa5.75□□□□□ -1.49
LINC01088-201ENST00000437737 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
LINC01088-201ENST00000437737 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
LINC01088-201ENST00000437737 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
LINC01088-201ENST00000437737 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
LINC01088-201ENST00000437737 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
LINC01088-201ENST00000437737 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
LINC01088-201ENST00000437737 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
LINC01088-201ENST00000437737 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms