RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 LCA10Q71F78 164 aa11.27□□□□□ -0.61
SMARCAL1-208ENST00000434435 PCP4P48539 62 aa11.22□□□□□ -0.61
SMARCAL1-208ENST00000434435 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
SMARCAL1-208ENST00000434435 ATP5EP56381 51 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-208ENST00000434435 CSAG1Q6PB30 78 aa11.15□□□□□ -0.62
SMARCAL1-208ENST00000434435 KRTAP10-6P60371 365 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-208ENST00000434435 TMEM258P61165 79 aa11.13□□□□□ -0.63
SMARCAL1-208ENST00000434435 CHKB-CPT1BH3BT56 60 aa11.12□□□□□ -0.63
SMARCAL1-208ENST00000434435 LORP23490 312 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-208ENST00000434435 COA5Q86WW8 74 aa11.07□□□□□ -0.64
SMARCAL1-208ENST00000434435 SPTSSBQ8NFR3 76 aa11.03□□□□□ -0.64
SMARCAL1-208ENST00000434435 KRTAP9-8Q9BYQ0 159 aa10.96□□□□□ -0.65
SMARCAL1-208ENST00000434435 MT2AP02795 61 aa10.9□□□□□ -0.66
SMARCAL1-208ENST00000434435 H0YAA0 97 aa10.85□□□□□ -0.67
SMARCAL1-208ENST00000434435 MT1FP04733 61 aa10.82□□□□□ -0.68
SMARCAL1-208ENST00000434435 KRTAP10-10P60014 251 aa10.82□□□□□ -0.68
SMARCAL1-208ENST00000434435 KRTAP9-2Q9BYQ4 174 aa10.78□□□□□ -0.68
SMARCAL1-208ENST00000434435 SERP1Q9Y6X1 66 aa10.78□□□□□ -0.68
SMARCAL1-208ENST00000434435 ADM2Q7Z4H4 148 aa10.77□□□□□ -0.69
SMARCAL1-208ENST00000434435 KRTAP9-6A0A140TA67 174 aa10.64□□□□□ -0.71
SMARCAL1-208ENST00000434435 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
SMARCAL1-208ENST00000434435 P0C880 135 aa10.61□□□□□ -0.71
SMARCAL1-208ENST00000434435 SEC61GP60059 68 aa10.59□□□□□ -0.71
SMARCAL1-208ENST00000434435 KRTAP9-3Q9BYQ3 159 aa10.58□□□□□ -0.72
SMARCAL1-208ENST00000434435 CRIPTQ9P021 101 aa10.57□□□□□ -0.72
SMARCAL1-208ENST00000434435 LCE2DQ5TA82 110 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-208ENST00000434435 RPS28P62857 69 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-208ENST00000434435 A0A1B0GU69 56 aa10.49□□□□□ -0.73
SMARCAL1-208ENST00000434435 LINC01558Q9Y6Z2 57 aa10.47□□□□□ -0.73
SMARCAL1-208ENST00000434435 KRTAP19-1Q8IUB9 90 aa10.44□□□□□ -0.74
SMARCAL1-208ENST00000434435 SPRR2GQ9BYE4 73 aa10.44□□□□□ -0.74
SMARCAL1-208ENST00000434435 R4GN34 69 aa10.44□□□□□ -0.74
SMARCAL1-208ENST00000434435 SMIM26A0A096LP01 95 aa10.42□□□□□ -0.74
SMARCAL1-208ENST00000434435 PRR15LQ9BU68 103 aa10.42□□□□□ -0.74
SMARCAL1-208ENST00000434435 M0QZ58 72 aa10.4□□□□□ -0.74
SMARCAL1-208ENST00000434435 V9GYY9 64 aa10.38□□□□□ -0.75
SMARCAL1-208ENST00000434435 LCE2BO14633 110 aa10.37□□□□□ -0.75
SMARCAL1-208ENST00000434435 Q1T7F1 81 aa10.32□□□□□ -0.76
SMARCAL1-208ENST00000434435 A0A1B0GU33 70 aa10.31□□□□□ -0.76
SMARCAL1-208ENST00000434435 KRTAP19-8Q3LI54 63 aa10.25□□□□□ -0.77
SMARCAL1-208ENST00000434435 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
SMARCAL1-208ENST00000434435 Q5VV11 94 aa10.21□□□□□ -0.77
SMARCAL1-208ENST00000434435 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
SMARCAL1-208ENST00000434435 PSPHP1O15172 72 aa10.17□□□□□ -0.78
SMARCAL1-208ENST00000434435 SPATA8Q6RVD6 105 aa10.15□□□□□ -0.78
SMARCAL1-208ENST00000434435 MT1BP07438 61 aa10.14□□□□□ -0.79
SMARCAL1-208ENST00000434435 USH2AO75445 5202 aa10.11□□□□□ -0.79
SMARCAL1-208ENST00000434435 UQCR11O14957 56 aa10.08□□□□□ -0.8
SMARCAL1-208ENST00000434435 CRCT1Q9UGL9 99 aa10.07□□□□□ -0.8
SMARCAL1-208ENST00000434435 A0A0D9SG42 100 aa10.02□□□□□ -0.81
SMARCAL1-208ENST00000434435 A6NN06 94 aa10.02□□□□□ -0.81
SMARCAL1-208ENST00000434435 PLAC4Q8WY50 150 aa10.02□□□□□ -0.81
SMARCAL1-208ENST00000434435 FSIP2Q5CZC0 6907 aa9.96□□□□□ -0.81
SMARCAL1-208ENST00000434435 A8MU10 97 aa9.93□□□□□ -0.82
SMARCAL1-208ENST00000434435 MIR22HGQ0VDD5 57 aa9.92□□□□□ -0.82
SMARCAL1-208ENST00000434435 A6NED7 52 aa9.9□□□□□ -0.82
SMARCAL1-208ENST00000434435 KRTAP19-6Q3LI70 58 aa9.88□□□□□ -0.83
SMARCAL1-208ENST00000434435 SSPOA2VEC9 5147 aa9.86□□□□□ -0.83
SMARCAL1-208ENST00000434435 SPINT4Q6UDR6 99 aa9.84□□□□□ -0.83
SMARCAL1-208ENST00000434435 KRTAP12-1P59990 96 aa9.83□□□□□ -0.84
SMARCAL1-208ENST00000434435 KRTAP12-2P59991 146 aa9.77□□□□□ -0.85
SMARCAL1-208ENST00000434435 KRTAP10-5P60370 271 aa9.75□□□□□ -0.85
SMARCAL1-208ENST00000434435 CAMK2N1Q7Z7J9 78 aa9.73□□□□□ -0.85
SMARCAL1-208ENST00000434435 PRO2289Q9P1D8 64 aa9.72□□□□□ -0.85
SMARCAL1-208ENST00000434435 MT1XP80297 61 aa9.69□□□□□ -0.86
SMARCAL1-208ENST00000434435 CDC42SE1Q9NRR8 79 aa9.64□□□□□ -0.87
SMARCAL1-208ENST00000434435 K7ERS5 55 aa9.6□□□□□ -0.87
SMARCAL1-208ENST00000434435 FCGBPQ9Y6R7 5405 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-208ENST00000434435 KRTAP9-7A8MTY7 169 aa9.5□□□□□ -0.89
SMARCAL1-208ENST00000434435 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-208ENST00000434435 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
SMARCAL1-208ENST00000434435 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
SMARCAL1-208ENST00000434435 KRTAP10-7P60409 375 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-208ENST00000434435 KRTAP10-12P60413 245 aa9.21□□□□□ -0.94
SMARCAL1-208ENST00000434435 MACF1Q9UPN3 7388 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-208ENST00000434435 TNP1P09430 55 aa9.18□□□□□ -0.94
SMARCAL1-208ENST00000434435 ROMO1P60602 79 aa9.08□□□□□ -0.96
SMARCAL1-208ENST00000434435 KRTAP25-1Q3LHN0 102 aa9.04□□□□□ -0.96
SMARCAL1-208ENST00000434435 KRTAP4-8A0A0G2JLE6 195 aa9.01□□□□□ -0.97
SMARCAL1-208ENST00000434435 KRTAP4-8Q9BYQ9 185 aa9.01□□□□□ -0.97
SMARCAL1-208ENST00000434435 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.98
SMARCAL1-208ENST00000434435 KMT2DO14686 5537 aa8.94□□□□□ -0.98
SMARCAL1-208ENST00000434435 PRO0628Q9UI54 55 aa8.92□□□□□ -0.98
SMARCAL1-208ENST00000434435 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-208ENST00000434435 KRTAP6-3Q3LI67 103 aa8.88□□□□□ -0.99
SMARCAL1-208ENST00000434435 PMAIP1Q13794 54 aa8.86□□□□□ -0.99
SMARCAL1-208ENST00000434435 LCE3AQ5TA76 89 aa8.85□□□□□ -0.99
SMARCAL1-208ENST00000434435 KRTAP5-9P26371 169 aa8.79□□□□□ -1
SMARCAL1-208ENST00000434435 SPRR2FQ96RM1 72 aa8.74□□□□□ -1.01
SMARCAL1-208ENST00000434435 KRTAP23-1A1A580 65 aa8.73□□□□□ -1.01
SMARCAL1-208ENST00000434435 KRTAP19-5Q3LI72 72 aa8.65□□□□□ -1.02
SMARCAL1-208ENST00000434435 KRTAP19-7Q3SYF9 63 aa8.65□□□□□ -1.02
SMARCAL1-208ENST00000434435 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
SMARCAL1-208ENST00000434435 MT1EP04732 61 aa8.54□□□□□ -1.04
SMARCAL1-208ENST00000434435 KRTAP12-3P60328 96 aa8.52□□□□□ -1.05
SMARCAL1-208ENST00000434435 MUC12Q9UKN1 5478 aa8.44□□□□□ -1.06
SMARCAL1-208ENST00000434435 SPRR2EP22531 72 aa8.44□□□□□ -1.06
SMARCAL1-208ENST00000434435 SPRR2BP35325 72 aa8.44□□□□□ -1.06
SMARCAL1-208ENST00000434435 SPRR2AP35326 72 aa8.44□□□□□ -1.06
SMARCAL1-208ENST00000434435 LCE1AQ5T7P2 110 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms