RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 COX6B2Q6YFQ2 88 aa6.76□□□□□ -1.33
DDX56-204ENST00000431640 XP32Q5T750 250 aa6.75□□□□□ -1.33
DDX56-204ENST00000431640 SEC61GP60059 68 aa6.74□□□□□ -1.33
DDX56-204ENST00000431640 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
DDX56-204ENST00000431640 A8MU10 97 aa6.7□□□□□ -1.34
DDX56-204ENST00000431640 UQCR11O14957 56 aa6.69□□□□□ -1.34
DDX56-204ENST00000431640 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
DDX56-204ENST00000431640 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
DDX56-204ENST00000431640 LRP2P98164 4655 aa6.67□□□□□ -1.34
DDX56-204ENST00000431640 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
DDX56-204ENST00000431640 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
DDX56-204ENST00000431640 A6NN06 94 aa6.56□□□□□ -1.36
DDX56-204ENST00000431640 A0A1B0GU33 70 aa6.52□□□□□ -1.36
DDX56-204ENST00000431640 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
DDX56-204ENST00000431640 S4R3F8 94 aa6.52□□□□□ -1.37
DDX56-204ENST00000431640 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
DDX56-204ENST00000431640 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
DDX56-204ENST00000431640 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
DDX56-204ENST00000431640 KTN1-AS1Q86SY8 53 aa6.48□□□□□ -1.37
DDX56-204ENST00000431640 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
DDX56-204ENST00000431640 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
DDX56-204ENST00000431640 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
DDX56-204ENST00000431640 H0YAA0 97 aa6.42□□□□□ -1.38
DDX56-204ENST00000431640 MUC2Q02817 5179 aa6.39□□□□□ -1.39
DDX56-204ENST00000431640 RNF213Q63HN8 5207 aa6.39□□□□□ -1.39
DDX56-204ENST00000431640 CSAG1Q6PB30 78 aa6.37□□□□□ -1.39
DDX56-204ENST00000431640 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
DDX56-204ENST00000431640 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
DDX56-204ENST00000431640 K7ERS5 55 aa6.32□□□□□ -1.4
DDX56-204ENST00000431640 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
DDX56-204ENST00000431640 KRTAP19-2Q3LHN2 52 aa6.25□□□□□ -1.41
DDX56-204ENST00000431640 P0C880 135 aa6.24□□□□□ -1.41
DDX56-204ENST00000431640 M0QZ58 72 aa6.2□□□□□ -1.42
DDX56-204ENST00000431640 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
DDX56-204ENST00000431640 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
DDX56-204ENST00000431640 A0A0D9SG42 100 aa6.15□□□□□ -1.42
DDX56-204ENST00000431640 PRAC1Q96KF2 57 aa6.15□□□□□ -1.42
DDX56-204ENST00000431640 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
DDX56-204ENST00000431640 FLGP20930 4061 aaPredicted RBP6.1□□□□□ -1.43
DDX56-204ENST00000431640 ROMO1P60602 79 aa6.07□□□□□ -1.44
DDX56-204ENST00000431640 MT1HP80294 61 aa6.03□□□□□ -1.44
DDX56-204ENST00000431640 R4GN34 69 aa6.03□□□□□ -1.44
DDX56-204ENST00000431640 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
DDX56-204ENST00000431640 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
DDX56-204ENST00000431640 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
DDX56-204ENST00000431640 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
DDX56-204ENST00000431640 LINC01554Q52M75 96 aa5.97□□□□□ -1.45
DDX56-204ENST00000431640 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
DDX56-204ENST00000431640 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
DDX56-204ENST00000431640 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
DDX56-204ENST00000431640 M0R2T5 61 aa5.83□□□□□ -1.48
DDX56-204ENST00000431640 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
DDX56-204ENST00000431640 MT2AP02795 61 aa5.74□□□□□ -1.49
DDX56-204ENST00000431640 MT1FP04733 61 aa5.72□□□□□ -1.49
DDX56-204ENST00000431640 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
DDX56-204ENST00000431640 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
DDX56-204ENST00000431640 SPRR2GQ9BYE4 73 aa5.63□□□□□ -1.51
DDX56-204ENST00000431640 KRTAP10-10P60014 251 aa5.6□□□□□ -1.51
DDX56-204ENST00000431640 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
DDX56-204ENST00000431640 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
DDX56-204ENST00000431640 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
DDX56-204ENST00000431640 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
DDX56-204ENST00000431640 TNP1P09430 55 aa5.5□□□□□ -1.53
DDX56-204ENST00000431640 LCE2BO14633 110 aa5.49□□□□□ -1.53
DDX56-204ENST00000431640 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
DDX56-204ENST00000431640 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
DDX56-204ENST00000431640 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
DDX56-204ENST00000431640 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
DDX56-204ENST00000431640 USH2AO75445 5202 aa5.4□□□□□ -1.55
DDX56-204ENST00000431640 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
DDX56-204ENST00000431640 MT1BP07438 61 aa5.37□□□□□ -1.55
DDX56-204ENST00000431640 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
DDX56-204ENST00000431640 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
DDX56-204ENST00000431640 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
DDX56-204ENST00000431640 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.57
DDX56-204ENST00000431640 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
DDX56-204ENST00000431640 MT1XP80297 61 aa5.2□□□□□ -1.58
DDX56-204ENST00000431640 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
DDX56-204ENST00000431640 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
DDX56-204ENST00000431640 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
DDX56-204ENST00000431640 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
DDX56-204ENST00000431640 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.6
DDX56-204ENST00000431640 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
DDX56-204ENST00000431640 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
DDX56-204ENST00000431640 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
DDX56-204ENST00000431640 H3BS24 57 aa5.01□□□□□ -1.61
DDX56-204ENST00000431640 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
DDX56-204ENST00000431640 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
DDX56-204ENST00000431640 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
DDX56-204ENST00000431640 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
DDX56-204ENST00000431640 KMT2DO14686 5537 aa4.84□□□□□ -1.63
DDX56-204ENST00000431640 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
DDX56-204ENST00000431640 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
DDX56-204ENST00000431640 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
DDX56-204ENST00000431640 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
DDX56-204ENST00000431640 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
DDX56-204ENST00000431640 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
DDX56-204ENST00000431640 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
DDX56-204ENST00000431640 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
DDX56-204ENST00000431640 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms