RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 KIAA1109Q2LD37 5005 aa7.48□□□□□ -1.21
HOXC4-202ENST00000430889 A8MU10 97 aa7.47□□□□□ -1.21
HOXC4-202ENST00000430889 LCA10Q71F78 164 aa7.44□□□□□ -1.22
HOXC4-202ENST00000430889 MT1HL1P0DM35 61 aa7.42□□□□□ -1.22
HOXC4-202ENST00000430889 A6NED7 52 aa7.41□□□□□ -1.22
HOXC4-202ENST00000430889 SPINK7P58062 85 aa7.41□□□□□ -1.22
HOXC4-202ENST00000430889 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
HOXC4-202ENST00000430889 CDC42SE1Q9NRR8 79 aa7.39□□□□□ -1.23
HOXC4-202ENST00000430889 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
HOXC4-202ENST00000430889 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
HOXC4-202ENST00000430889 A0A1B0GU69 56 aa7.33□□□□□ -1.24
HOXC4-202ENST00000430889 KRTAP4-7Q9BYR0 210 aa7.33□□□□□ -1.24
HOXC4-202ENST00000430889 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
HOXC4-202ENST00000430889 HERC2O95714 4834 aa7.32□□□□□ -1.24
HOXC4-202ENST00000430889 ATP11AUNQ6ZP68 121 aa7.3□□□□□ -1.24
HOXC4-202ENST00000430889 COX6B2Q6YFQ2 88 aa7.28□□□□□ -1.24
HOXC4-202ENST00000430889 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
HOXC4-202ENST00000430889 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
HOXC4-202ENST00000430889 A6NN06 94 aa7.21□□□□□ -1.26
HOXC4-202ENST00000430889 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
HOXC4-202ENST00000430889 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
HOXC4-202ENST00000430889 UQCR11O14957 56 aa7.19□□□□□ -1.26
HOXC4-202ENST00000430889 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
HOXC4-202ENST00000430889 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
HOXC4-202ENST00000430889 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
HOXC4-202ENST00000430889 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.27
HOXC4-202ENST00000430889 PCLOQ9Y6V0 5065 aa7.15□□□□□ -1.27
HOXC4-202ENST00000430889 SEC61GP60059 68 aa7.12□□□□□ -1.27
HOXC4-202ENST00000430889 ABCA13Q86UQ4 5058 aa7.12□□□□□ -1.27
HOXC4-202ENST00000430889 LRP2P98164 4655 aa7.11□□□□□ -1.27
HOXC4-202ENST00000430889 H0YAA0 97 aa7.05□□□□□ -1.28
HOXC4-202ENST00000430889 KTN1-AS1Q86SY8 53 aa7.05□□□□□ -1.28
HOXC4-202ENST00000430889 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
HOXC4-202ENST00000430889 LPAP08519 4548 aa7.04□□□□□ -1.28
HOXC4-202ENST00000430889 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
HOXC4-202ENST00000430889 A0A1B0GU33 70 aa7.02□□□□□ -1.29
HOXC4-202ENST00000430889 S4R3F8 94 aa7.01□□□□□ -1.29
HOXC4-202ENST00000430889 KRTAP4-2Q9BYR5 136 aa7□□□□□ -1.29
HOXC4-202ENST00000430889 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
HOXC4-202ENST00000430889 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
HOXC4-202ENST00000430889 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
HOXC4-202ENST00000430889 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
HOXC4-202ENST00000430889 HERC1Q15751 4861 aa6.85□□□□□ -1.31
HOXC4-202ENST00000430889 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
HOXC4-202ENST00000430889 P0C880 135 aa6.83□□□□□ -1.32
HOXC4-202ENST00000430889 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
HOXC4-202ENST00000430889 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
HOXC4-202ENST00000430889 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
HOXC4-202ENST00000430889 PRAC1Q96KF2 57 aa6.77□□□□□ -1.32
HOXC4-202ENST00000430889 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
HOXC4-202ENST00000430889 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
HOXC4-202ENST00000430889 KRTAP4-11Q9BYQ6 195 aa6.69□□□□□ -1.34
HOXC4-202ENST00000430889 K7ERS5 55 aa6.67□□□□□ -1.34
HOXC4-202ENST00000430889 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
HOXC4-202ENST00000430889 A0A0D9SG42 100 aa6.65□□□□□ -1.35
HOXC4-202ENST00000430889 HMCN2Q8NDA2 5059 aa6.64□□□□□ -1.35
HOXC4-202ENST00000430889 M0QZ58 72 aa6.62□□□□□ -1.35
HOXC4-202ENST00000430889 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
HOXC4-202ENST00000430889 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
HOXC4-202ENST00000430889 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
HOXC4-202ENST00000430889 H3BS24 57 aa6.56□□□□□ -1.36
HOXC4-202ENST00000430889 ROMO1P60602 79 aa6.55□□□□□ -1.36
HOXC4-202ENST00000430889 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
HOXC4-202ENST00000430889 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
HOXC4-202ENST00000430889 MUC2Q02817 5179 aa6.46□□□□□ -1.37
HOXC4-202ENST00000430889 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
HOXC4-202ENST00000430889 R4GN34 69 aa6.44□□□□□ -1.38
HOXC4-202ENST00000430889 UBR4Q5T4S7 5183 aa6.43□□□□□ -1.38
HOXC4-202ENST00000430889 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
HOXC4-202ENST00000430889 RNF213Q63HN8 5207 aa6.32□□□□□ -1.4
HOXC4-202ENST00000430889 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
HOXC4-202ENST00000430889 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
HOXC4-202ENST00000430889 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
HOXC4-202ENST00000430889 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
HOXC4-202ENST00000430889 MT1HP80294 61 aa6.2□□□□□ -1.42
HOXC4-202ENST00000430889 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
HOXC4-202ENST00000430889 MT2AP02795 61 aa6.05□□□□□ -1.44
HOXC4-202ENST00000430889 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
HOXC4-202ENST00000430889 M0R2T5 61 aa6.04□□□□□ -1.44
HOXC4-202ENST00000430889 MT1FP04733 61 aa6.04□□□□□ -1.44
HOXC4-202ENST00000430889 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
HOXC4-202ENST00000430889 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
HOXC4-202ENST00000430889 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
HOXC4-202ENST00000430889 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
HOXC4-202ENST00000430889 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
HOXC4-202ENST00000430889 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
HOXC4-202ENST00000430889 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
HOXC4-202ENST00000430889 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
HOXC4-202ENST00000430889 TNP1P09430 55 aa5.85□□□□□ -1.47
HOXC4-202ENST00000430889 MT1BP07438 61 aa5.82□□□□□ -1.48
HOXC4-202ENST00000430889 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
HOXC4-202ENST00000430889 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
HOXC4-202ENST00000430889 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
HOXC4-202ENST00000430889 MT1XP80297 61 aa5.71□□□□□ -1.5
HOXC4-202ENST00000430889 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
HOXC4-202ENST00000430889 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
HOXC4-202ENST00000430889 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
HOXC4-202ENST00000430889 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
HOXC4-202ENST00000430889 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
HOXC4-202ENST00000430889 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms