RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
NEDD1-203ENST00000429527 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
NEDD1-203ENST00000429527 A0A1B0GU69 56 aa5.21□□□□□ -1.58
NEDD1-203ENST00000429527 LRP2P98164 4655 aa5.2□□□□□ -1.58
NEDD1-203ENST00000429527 UQCR11O14957 56 aa5.2□□□□□ -1.58
NEDD1-203ENST00000429527 LPAP08519 4548 aa5.2□□□□□ -1.58
NEDD1-203ENST00000429527 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
NEDD1-203ENST00000429527 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
NEDD1-203ENST00000429527 A8MUU9 505 aa5.16□□□□□ -1.58
NEDD1-203ENST00000429527 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
NEDD1-203ENST00000429527 XP32Q5T750 250 aa5.13□□□□□ -1.59
NEDD1-203ENST00000429527 C4orf48Q5BLP8 95 aa5.12□□□□□ -1.59
NEDD1-203ENST00000429527 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
NEDD1-203ENST00000429527 KRTAP3-1Q9BYR8 98 aa5.06□□□□□ -1.6
NEDD1-203ENST00000429527 RETNLBQ9BQ08 111 aa5.05□□□□□ -1.6
NEDD1-203ENST00000429527 LINC01554Q52M75 96 aa5.04□□□□□ -1.6
NEDD1-203ENST00000429527 H0YAA0 97 aa5.04□□□□□ -1.6
NEDD1-203ENST00000429527 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
NEDD1-203ENST00000429527 ADM2Q7Z4H4 148 aa5.01□□□□□ -1.61
NEDD1-203ENST00000429527 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
NEDD1-203ENST00000429527 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
NEDD1-203ENST00000429527 KRTAP4-1Q9BYQ7 146 aa4.97□□□□□ -1.61
NEDD1-203ENST00000429527 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.61
NEDD1-203ENST00000429527 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
NEDD1-203ENST00000429527 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
NEDD1-203ENST00000429527 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
NEDD1-203ENST00000429527 A0A1B0GU33 70 aa4.93□□□□□ -1.62
NEDD1-203ENST00000429527 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
NEDD1-203ENST00000429527 KRTAP25-1Q3LHN0 102 aa4.92□□□□□ -1.62
NEDD1-203ENST00000429527 CSAG1Q6PB30 78 aa4.91□□□□□ -1.62
NEDD1-203ENST00000429527 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
NEDD1-203ENST00000429527 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
NEDD1-203ENST00000429527 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
NEDD1-203ENST00000429527 MUC2Q02817 5179 aa4.85□□□□□ -1.63
NEDD1-203ENST00000429527 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
NEDD1-203ENST00000429527 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.64
NEDD1-203ENST00000429527 MT1HP80294 61 aa4.81□□□□□ -1.64
NEDD1-203ENST00000429527 C9orf92A6NGG3 77 aa4.81□□□□□ -1.64
NEDD1-203ENST00000429527 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
NEDD1-203ENST00000429527 ROMO1P60602 79 aa4.77□□□□□ -1.65
NEDD1-203ENST00000429527 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
NEDD1-203ENST00000429527 K7ERS5 55 aa4.74□□□□□ -1.65
NEDD1-203ENST00000429527 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
NEDD1-203ENST00000429527 S4R3F8 94 aa4.69□□□□□ -1.66
NEDD1-203ENST00000429527 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
NEDD1-203ENST00000429527 M0QZ58 72 aa4.62□□□□□ -1.67
NEDD1-203ENST00000429527 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
NEDD1-203ENST00000429527 P0C880 135 aa4.6□□□□□ -1.67
NEDD1-203ENST00000429527 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
NEDD1-203ENST00000429527 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
NEDD1-203ENST00000429527 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
NEDD1-203ENST00000429527 H3BS24 57 aa4.57□□□□□ -1.68
NEDD1-203ENST00000429527 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
NEDD1-203ENST00000429527 MT2AP02795 61 aa4.5□□□□□ -1.69
NEDD1-203ENST00000429527 M0R2T5 61 aa4.48□□□□□ -1.69
NEDD1-203ENST00000429527 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
NEDD1-203ENST00000429527 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
NEDD1-203ENST00000429527 A0A0D9SG42 100 aa4.43□□□□□ -1.7
NEDD1-203ENST00000429527 MT1FP04733 61 aa4.43□□□□□ -1.7
NEDD1-203ENST00000429527 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
NEDD1-203ENST00000429527 LCE2BO14633 110 aa4.37□□□□□ -1.71
NEDD1-203ENST00000429527 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
NEDD1-203ENST00000429527 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
NEDD1-203ENST00000429527 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
NEDD1-203ENST00000429527 USH2AO75445 5202 aa4.32□□□□□ -1.72
NEDD1-203ENST00000429527 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
NEDD1-203ENST00000429527 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
NEDD1-203ENST00000429527 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
NEDD1-203ENST00000429527 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
NEDD1-203ENST00000429527 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
NEDD1-203ENST00000429527 R4GN34 69 aa4.25□□□□□ -1.73
NEDD1-203ENST00000429527 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
NEDD1-203ENST00000429527 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
NEDD1-203ENST00000429527 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
NEDD1-203ENST00000429527 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
NEDD1-203ENST00000429527 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
NEDD1-203ENST00000429527 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.74
NEDD1-203ENST00000429527 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
NEDD1-203ENST00000429527 MT1BP07438 61 aa4.13□□□□□ -1.75
NEDD1-203ENST00000429527 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.76
NEDD1-203ENST00000429527 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
NEDD1-203ENST00000429527 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
NEDD1-203ENST00000429527 TNP1P09430 55 aa4.01□□□□□ -1.77
NEDD1-203ENST00000429527 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
NEDD1-203ENST00000429527 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
NEDD1-203ENST00000429527 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
NEDD1-203ENST00000429527 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
NEDD1-203ENST00000429527 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
NEDD1-203ENST00000429527 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
NEDD1-203ENST00000429527 MT1XP80297 61 aa3.87□□□□□ -1.79
NEDD1-203ENST00000429527 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
NEDD1-203ENST00000429527 NEBP20929 6669 aa3.85□□□□□ -1.79
NEDD1-203ENST00000429527 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
NEDD1-203ENST00000429527 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
NEDD1-203ENST00000429527 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
NEDD1-203ENST00000429527 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
NEDD1-203ENST00000429527 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
NEDD1-203ENST00000429527 INE1O15225 51 aa3.69□□□□□ -1.82
NEDD1-203ENST00000429527 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
NEDD1-203ENST00000429527 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms