RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
VARS2-203ENST00000428017 NDUFC1O43677 76 aa7.22□□□□□ -1.25
VARS2-203ENST00000428017 MT2AP02795 61 aa7.2□□□□□ -1.26
VARS2-203ENST00000428017 ACYP2P14621 99 aa7.18□□□□□ -1.26
VARS2-203ENST00000428017 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
VARS2-203ENST00000428017 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
VARS2-203ENST00000428017 KRTAP3-3Q9BYR6 98 aa7.17□□□□□ -1.26
VARS2-203ENST00000428017 MT1FP04733 61 aa7.14□□□□□ -1.27
VARS2-203ENST00000428017 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
VARS2-203ENST00000428017 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
VARS2-203ENST00000428017 CCDC179H3BU77 68 aa7.06□□□□□ -1.28
VARS2-203ENST00000428017 H7BZZ5 65 aa7.06□□□□□ -1.28
VARS2-203ENST00000428017 SPTSSBQ8NFR3 76 aa7.06□□□□□ -1.28
VARS2-203ENST00000428017 CYSTM1Q9H1C7 97 aa7.05□□□□□ -1.28
VARS2-203ENST00000428017 H0YAA0 97 aa7□□□□□ -1.29
VARS2-203ENST00000428017 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
VARS2-203ENST00000428017 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
VARS2-203ENST00000428017 COA5Q86WW8 74 aa6.96□□□□□ -1.3
VARS2-203ENST00000428017 FSIP2Q5CZC0 6907 aa6.92□□□□□ -1.3
VARS2-203ENST00000428017 CRIPTQ9P021 101 aa6.91□□□□□ -1.3
VARS2-203ENST00000428017 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
VARS2-203ENST00000428017 ATP5EP56381 51 aaPredicted RBP6.9□□□□□ -1.3
VARS2-203ENST00000428017 LCE2BO14633 110 aa6.87□□□□□ -1.31
VARS2-203ENST00000428017 TMEM258P61165 79 aa6.86□□□□□ -1.31
VARS2-203ENST00000428017 P0C880 135 aa6.82□□□□□ -1.32
VARS2-203ENST00000428017 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
VARS2-203ENST00000428017 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
VARS2-203ENST00000428017 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
VARS2-203ENST00000428017 R4GN34 69 aa6.78□□□□□ -1.32
VARS2-203ENST00000428017 SEC61GP60059 68 aa6.77□□□□□ -1.33
VARS2-203ENST00000428017 M0QZ58 72 aa6.74□□□□□ -1.33
VARS2-203ENST00000428017 Q5VV11 94 aa6.74□□□□□ -1.33
VARS2-203ENST00000428017 SERP1Q9Y6X1 66 aa6.73□□□□□ -1.33
VARS2-203ENST00000428017 PCP4P48539 62 aa6.72□□□□□ -1.33
VARS2-203ENST00000428017 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
VARS2-203ENST00000428017 USH2AO75445 5202 aa6.68□□□□□ -1.34
VARS2-203ENST00000428017 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
VARS2-203ENST00000428017 A0A1B0GU69 56 aa6.63□□□□□ -1.35
VARS2-203ENST00000428017 MT1BP07438 61 aa6.63□□□□□ -1.35
VARS2-203ENST00000428017 KRTAP19-6Q3LI70 58 aa6.59□□□□□ -1.35
VARS2-203ENST00000428017 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
VARS2-203ENST00000428017 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
VARS2-203ENST00000428017 A0A1B0GU33 70 aa6.56□□□□□ -1.36
VARS2-203ENST00000428017 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
VARS2-203ENST00000428017 LINC01558Q9Y6Z2 57 aa6.52□□□□□ -1.37
VARS2-203ENST00000428017 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
VARS2-203ENST00000428017 A6NN06 94 aa6.49□□□□□ -1.37
VARS2-203ENST00000428017 KRTAP9-7A8MTY7 169 aa6.49□□□□□ -1.37
VARS2-203ENST00000428017 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.38
VARS2-203ENST00000428017 V9GYY9 64 aa6.44□□□□□ -1.38
VARS2-203ENST00000428017 A0A0D9SG42 100 aa6.43□□□□□ -1.38
VARS2-203ENST00000428017 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
VARS2-203ENST00000428017 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
VARS2-203ENST00000428017 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
VARS2-203ENST00000428017 SMIM26A0A096LP01 95 aa6.4□□□□□ -1.38
VARS2-203ENST00000428017 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
VARS2-203ENST00000428017 Q1T7F1 81 aa6.36□□□□□ -1.39
VARS2-203ENST00000428017 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
VARS2-203ENST00000428017 UQCR11O14957 56 aa6.33□□□□□ -1.4
VARS2-203ENST00000428017 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
VARS2-203ENST00000428017 MT1XP80297 61 aa6.32□□□□□ -1.4
VARS2-203ENST00000428017 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
VARS2-203ENST00000428017 PSPHP1O15172 72 aa6.31□□□□□ -1.4
VARS2-203ENST00000428017 A8MU10 97 aa6.29□□□□□ -1.4
VARS2-203ENST00000428017 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
VARS2-203ENST00000428017 MIR22HGQ0VDD5 57 aa6.22□□□□□ -1.41
VARS2-203ENST00000428017 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
VARS2-203ENST00000428017 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.42
VARS2-203ENST00000428017 A6NED7 52 aa6.15□□□□□ -1.42
VARS2-203ENST00000428017 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
VARS2-203ENST00000428017 K7ERS5 55 aa6.09□□□□□ -1.43
VARS2-203ENST00000428017 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
VARS2-203ENST00000428017 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
VARS2-203ENST00000428017 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
VARS2-203ENST00000428017 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
VARS2-203ENST00000428017 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
VARS2-203ENST00000428017 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
VARS2-203ENST00000428017 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
VARS2-203ENST00000428017 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
VARS2-203ENST00000428017 TNP1P09430 55 aa5.91□□□□□ -1.46
VARS2-203ENST00000428017 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
VARS2-203ENST00000428017 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
VARS2-203ENST00000428017 KMT2DO14686 5537 aa5.82□□□□□ -1.48
VARS2-203ENST00000428017 NEBP20929 6669 aa5.79□□□□□ -1.48
VARS2-203ENST00000428017 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
VARS2-203ENST00000428017 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
VARS2-203ENST00000428017 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
VARS2-203ENST00000428017 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
VARS2-203ENST00000428017 ROMO1P60602 79 aa5.69□□□□□ -1.5
VARS2-203ENST00000428017 SPRR2EP22531 72 aa5.68□□□□□ -1.5
VARS2-203ENST00000428017 SPRR2BP35325 72 aa5.68□□□□□ -1.5
VARS2-203ENST00000428017 SPRR2AP35326 72 aa5.68□□□□□ -1.5
VARS2-203ENST00000428017 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
VARS2-203ENST00000428017 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
VARS2-203ENST00000428017 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
VARS2-203ENST00000428017 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
VARS2-203ENST00000428017 MT1EP04732 61 aa5.59□□□□□ -1.51
VARS2-203ENST00000428017 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
VARS2-203ENST00000428017 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
VARS2-203ENST00000428017 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms