RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
PHF1-204ENST00000427826 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
PHF1-204ENST00000427826 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
PHF1-204ENST00000427826 CYP4F30PQ9H0H9 118 aa7□□□□□ -1.29
PHF1-204ENST00000427826 ATOX1O00244 68 aa6.99□□□□□ -1.29
PHF1-204ENST00000427826 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
PHF1-204ENST00000427826 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
PHF1-204ENST00000427826 H0Y9P7 68 aa6.98□□□□□ -1.29
PHF1-204ENST00000427826 LCA10Q71F78 164 aa6.95□□□□□ -1.3
PHF1-204ENST00000427826 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
PHF1-204ENST00000427826 MP68P56378 58 aa6.9□□□□□ -1.3
PHF1-204ENST00000427826 OCR1Q9BZK8 76 aa6.9□□□□□ -1.3
PHF1-204ENST00000427826 SCGB1A1P11684 91 aa6.88□□□□□ -1.31
PHF1-204ENST00000427826 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
PHF1-204ENST00000427826 IMUPQ9GZP8 106 aa6.86□□□□□ -1.31
PHF1-204ENST00000427826 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
PHF1-204ENST00000427826 MT-ATP8P03928 68 aa6.84□□□□□ -1.31
PHF1-204ENST00000427826 Q5VV11 94 aa6.84□□□□□ -1.31
PHF1-204ENST00000427826 KLKP1Q107X0 134 aa6.83□□□□□ -1.32
PHF1-204ENST00000427826 H3BPC8 53 aa6.81□□□□□ -1.32
PHF1-204ENST00000427826 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
PHF1-204ENST00000427826 A8MUN3 132 aa6.79□□□□□ -1.32
PHF1-204ENST00000427826 A6NN06 94 aa6.78□□□□□ -1.32
PHF1-204ENST00000427826 MT1BP07438 61 aa6.78□□□□□ -1.32
PHF1-204ENST00000427826 KRTAP6-3Q3LI67 103 aa6.78□□□□□ -1.32
PHF1-204ENST00000427826 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
PHF1-204ENST00000427826 NDUFC1O43677 76 aa6.75□□□□□ -1.33
PHF1-204ENST00000427826 SMIM20Q8N5G0 67 aa6.72□□□□□ -1.33
PHF1-204ENST00000427826 H0YAA0 97 aa6.69□□□□□ -1.34
PHF1-204ENST00000427826 TRAV7A0A075B6U4 112 aa6.67□□□□□ -1.34
PHF1-204ENST00000427826 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
PHF1-204ENST00000427826 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
PHF1-204ENST00000427826 A0A0A0MQY5 61 aa6.61□□□□□ -1.35
PHF1-204ENST00000427826 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
PHF1-204ENST00000427826 ANAPC13Q9BS18 74 aa6.54□□□□□ -1.36
PHF1-204ENST00000427826 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
PHF1-204ENST00000427826 ACYP2P14621 99 aa6.52□□□□□ -1.37
PHF1-204ENST00000427826 SERP2Q8N6R1 65 aa6.52□□□□□ -1.37
PHF1-204ENST00000427826 SNURFQ9Y675 71 aa6.52□□□□□ -1.37
PHF1-204ENST00000427826 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
PHF1-204ENST00000427826 NEBP20929 6669 aa6.5□□□□□ -1.37
PHF1-204ENST00000427826 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
PHF1-204ENST00000427826 COX7CP15954 63 aa6.48□□□□□ -1.37
PHF1-204ENST00000427826 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
PHF1-204ENST00000427826 PLAC4Q8WY50 150 aa6.46□□□□□ -1.38
PHF1-204ENST00000427826 R4GN34 69 aa6.46□□□□□ -1.38
PHF1-204ENST00000427826 SPTSSBQ8NFR3 76 aa6.45□□□□□ -1.38
PHF1-204ENST00000427826 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
PHF1-204ENST00000427826 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
PHF1-204ENST00000427826 SPANXA2-OT1Q8N9U9 137 aa6.42□□□□□ -1.38
PHF1-204ENST00000427826 P0C880 135 aa6.41□□□□□ -1.38
PHF1-204ENST00000427826 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
PHF1-204ENST00000427826 M0QZ58 72 aa6.38□□□□□ -1.39
PHF1-204ENST00000427826 KMT2DO14686 5537 aa6.36□□□□□ -1.39
PHF1-204ENST00000427826 MT1XP80297 61 aa6.36□□□□□ -1.39
PHF1-204ENST00000427826 MDN1Q9NU22 5596 aa6.34□□□□□ -1.39
PHF1-204ENST00000427826 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
PHF1-204ENST00000427826 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
PHF1-204ENST00000427826 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
PHF1-204ENST00000427826 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
PHF1-204ENST00000427826 H7BZZ5 65 aa6.25□□□□□ -1.41
PHF1-204ENST00000427826 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
PHF1-204ENST00000427826 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
PHF1-204ENST00000427826 COA5Q86WW8 74 aa6.23□□□□□ -1.41
PHF1-204ENST00000427826 TMEM258P61165 79 aa6.22□□□□□ -1.41
PHF1-204ENST00000427826 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
PHF1-204ENST00000427826 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
PHF1-204ENST00000427826 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
PHF1-204ENST00000427826 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
PHF1-204ENST00000427826 SPRR2EP22531 72 aa6.15□□□□□ -1.42
PHF1-204ENST00000427826 SPRR2BP35325 72 aa6.15□□□□□ -1.42
PHF1-204ENST00000427826 SPRR2AP35326 72 aa6.15□□□□□ -1.42
PHF1-204ENST00000427826 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
PHF1-204ENST00000427826 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
PHF1-204ENST00000427826 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
PHF1-204ENST00000427826 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
PHF1-204ENST00000427826 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
PHF1-204ENST00000427826 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
PHF1-204ENST00000427826 SEC61GP60059 68 aa6.12□□□□□ -1.43
PHF1-204ENST00000427826 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.43
PHF1-204ENST00000427826 RPS28P62857 69 aaKnown RBP6.08□□□□□ -1.44
PHF1-204ENST00000427826 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
PHF1-204ENST00000427826 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
PHF1-204ENST00000427826 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
PHF1-204ENST00000427826 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
PHF1-204ENST00000427826 SPRR2DP22532 72 aa5.96□□□□□ -1.46
PHF1-204ENST00000427826 A0A1B0GU33 70 aa5.95□□□□□ -1.46
PHF1-204ENST00000427826 A0A1B0GU69 56 aa5.94□□□□□ -1.46
PHF1-204ENST00000427826 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
PHF1-204ENST00000427826 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
PHF1-204ENST00000427826 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
PHF1-204ENST00000427826 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
PHF1-204ENST00000427826 A0A0D9SG42 100 aa5.9□□□□□ -1.46
PHF1-204ENST00000427826 SPATA8Q6RVD6 105 aa5.89□□□□□ -1.47
PHF1-204ENST00000427826 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
PHF1-204ENST00000427826 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
PHF1-204ENST00000427826 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
PHF1-204ENST00000427826 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
PHF1-204ENST00000427826 Q1T7F1 81 aa5.78□□□□□ -1.48
PHF1-204ENST00000427826 V9GYY9 64 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms