RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 PCP4P48539 62 aa5.87□□□□□ -1.47
HDLBP-215ENST00000427487 TMEM258P61165 79 aa5.87□□□□□ -1.47
HDLBP-215ENST00000427487 LCA10Q71F78 164 aa5.85□□□□□ -1.47
HDLBP-215ENST00000427487 M0R2T5 61 aa5.83□□□□□ -1.48
HDLBP-215ENST00000427487 CSAG1Q6PB30 78 aa5.83□□□□□ -1.48
HDLBP-215ENST00000427487 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
HDLBP-215ENST00000427487 KRTAP9-2Q9BYQ4 174 aa5.8□□□□□ -1.48
HDLBP-215ENST00000427487 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
HDLBP-215ENST00000427487 CHKB-CPT1BH3BT56 60 aa5.77□□□□□ -1.49
HDLBP-215ENST00000427487 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
HDLBP-215ENST00000427487 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
HDLBP-215ENST00000427487 COA5Q86WW8 74 aa5.76□□□□□ -1.49
HDLBP-215ENST00000427487 H0YAA0 97 aa5.74□□□□□ -1.49
HDLBP-215ENST00000427487 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
HDLBP-215ENST00000427487 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
HDLBP-215ENST00000427487 SERP1Q9Y6X1 66 aa5.67□□□□□ -1.5
HDLBP-215ENST00000427487 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
HDLBP-215ENST00000427487 MT2AP02795 61 aa5.63□□□□□ -1.51
HDLBP-215ENST00000427487 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
HDLBP-215ENST00000427487 CRIPTQ9P021 101 aa5.59□□□□□ -1.51
HDLBP-215ENST00000427487 MT1FP04733 61 aa5.58□□□□□ -1.52
HDLBP-215ENST00000427487 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
HDLBP-215ENST00000427487 ADM2Q7Z4H4 148 aa5.57□□□□□ -1.52
HDLBP-215ENST00000427487 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
HDLBP-215ENST00000427487 SEC61GP60059 68 aa5.55□□□□□ -1.52
HDLBP-215ENST00000427487 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
HDLBP-215ENST00000427487 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
HDLBP-215ENST00000427487 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
HDLBP-215ENST00000427487 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
HDLBP-215ENST00000427487 V9GYY9 64 aa5.5□□□□□ -1.53
HDLBP-215ENST00000427487 SMIM26A0A096LP01 95 aa5.49□□□□□ -1.53
HDLBP-215ENST00000427487 P0C880 135 aa5.49□□□□□ -1.53
HDLBP-215ENST00000427487 A0A1B0GU69 56 aa5.47□□□□□ -1.53
HDLBP-215ENST00000427487 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
HDLBP-215ENST00000427487 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
HDLBP-215ENST00000427487 Q1T7F1 81 aa5.46□□□□□ -1.54
HDLBP-215ENST00000427487 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
HDLBP-215ENST00000427487 M0QZ58 72 aa5.45□□□□□ -1.54
HDLBP-215ENST00000427487 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
HDLBP-215ENST00000427487 R4GN34 69 aa5.43□□□□□ -1.54
HDLBP-215ENST00000427487 Q5VV11 94 aa5.4□□□□□ -1.54
HDLBP-215ENST00000427487 A0A1B0GU33 70 aa5.39□□□□□ -1.55
HDLBP-215ENST00000427487 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
HDLBP-215ENST00000427487 LCE2BO14633 110 aa5.35□□□□□ -1.55
HDLBP-215ENST00000427487 A6NN06 94 aa5.32□□□□□ -1.56
HDLBP-215ENST00000427487 UQCR11O14957 56 aa5.3□□□□□ -1.56
HDLBP-215ENST00000427487 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
HDLBP-215ENST00000427487 USH2AO75445 5202 aa5.27□□□□□ -1.57
HDLBP-215ENST00000427487 PSPHP1O15172 72 aa5.27□□□□□ -1.57
HDLBP-215ENST00000427487 MT1BP07438 61 aa5.25□□□□□ -1.57
HDLBP-215ENST00000427487 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
HDLBP-215ENST00000427487 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
HDLBP-215ENST00000427487 PLAC4Q8WY50 150 aa5.21□□□□□ -1.58
HDLBP-215ENST00000427487 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
HDLBP-215ENST00000427487 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
HDLBP-215ENST00000427487 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
HDLBP-215ENST00000427487 A6NED7 52 aa5.15□□□□□ -1.59
HDLBP-215ENST00000427487 A0A0D9SG42 100 aa5.14□□□□□ -1.59
HDLBP-215ENST00000427487 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
HDLBP-215ENST00000427487 A8MU10 97 aa5.11□□□□□ -1.59
HDLBP-215ENST00000427487 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
HDLBP-215ENST00000427487 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
HDLBP-215ENST00000427487 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
HDLBP-215ENST00000427487 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
HDLBP-215ENST00000427487 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
HDLBP-215ENST00000427487 SPINT4Q6UDR6 99 aa5.07□□□□□ -1.6
HDLBP-215ENST00000427487 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
HDLBP-215ENST00000427487 K7ERS5 55 aa5.04□□□□□ -1.6
HDLBP-215ENST00000427487 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
HDLBP-215ENST00000427487 MT1XP80297 61 aa5.03□□□□□ -1.6
HDLBP-215ENST00000427487 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
HDLBP-215ENST00000427487 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
HDLBP-215ENST00000427487 MACF1Q9UPN3 7388 aaKnown RBP5□□□□□ -1.61
HDLBP-215ENST00000427487 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
HDLBP-215ENST00000427487 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
HDLBP-215ENST00000427487 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
HDLBP-215ENST00000427487 TNP1P09430 55 aa4.8□□□□□ -1.64
HDLBP-215ENST00000427487 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
HDLBP-215ENST00000427487 ROMO1P60602 79 aa4.76□□□□□ -1.65
HDLBP-215ENST00000427487 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
HDLBP-215ENST00000427487 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
HDLBP-215ENST00000427487 NEBP20929 6669 aa4.71□□□□□ -1.65
HDLBP-215ENST00000427487 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
HDLBP-215ENST00000427487 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
HDLBP-215ENST00000427487 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
HDLBP-215ENST00000427487 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
HDLBP-215ENST00000427487 KMT2DO14686 5537 aa4.63□□□□□ -1.67
HDLBP-215ENST00000427487 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
HDLBP-215ENST00000427487 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
HDLBP-215ENST00000427487 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
HDLBP-215ENST00000427487 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
HDLBP-215ENST00000427487 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
HDLBP-215ENST00000427487 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
HDLBP-215ENST00000427487 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
HDLBP-215ENST00000427487 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
HDLBP-215ENST00000427487 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
HDLBP-215ENST00000427487 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
HDLBP-215ENST00000427487 MT1EP04732 61 aa4.44□□□□□ -1.7
HDLBP-215ENST00000427487 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
HDLBP-215ENST00000427487 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms