RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HCG22E2RYF7 251 aa6.93□□□□□ -1.3
SNX3-204ENST00000426155 MP68P56378 58 aa6.93□□□□□ -1.3
SNX3-204ENST00000426155 C8orf17Q9NRJ1 99 aa6.93□□□□□ -1.3
SNX3-204ENST00000426155 H3BPC8 53 aa6.92□□□□□ -1.3
SNX3-204ENST00000426155 V9GYY9 64 aa6.92□□□□□ -1.3
SNX3-204ENST00000426155 CYP4F30PQ9H0H9 118 aa6.91□□□□□ -1.3
SNX3-204ENST00000426155 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
SNX3-204ENST00000426155 HRES1P13985 223 aa6.9□□□□□ -1.3
SNX3-204ENST00000426155 ZCCHC13Q8WW36 166 aaKnown RBP6.9□□□□□ -1.3
SNX3-204ENST00000426155 Q1T7F1 81 aa6.88□□□□□ -1.31
SNX3-204ENST00000426155 PRR15Q8IV56 129 aa6.88□□□□□ -1.31
SNX3-204ENST00000426155 Q8N9P0 234 aaPredicted RBP6.88□□□□□ -1.31
SNX3-204ENST00000426155 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
SNX3-204ENST00000426155 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
SNX3-204ENST00000426155 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
SNX3-204ENST00000426155 K7EQZ3 153 aa6.87□□□□□ -1.31
SNX3-204ENST00000426155 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
SNX3-204ENST00000426155 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
SNX3-204ENST00000426155 C1orf64Q8NEQ6 169 aa6.83□□□□□ -1.32
SNX3-204ENST00000426155 SPINK7P58062 85 aa6.81□□□□□ -1.32
SNX3-204ENST00000426155 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
SNX3-204ENST00000426155 CASC2Q6XLA1 102 aa6.8□□□□□ -1.32
SNX3-204ENST00000426155 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
SNX3-204ENST00000426155 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
SNX3-204ENST00000426155 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
SNX3-204ENST00000426155 H0Y9P7 68 aa6.77□□□□□ -1.33
SNX3-204ENST00000426155 LINC00208Q96KT6 92 aa6.77□□□□□ -1.33
SNX3-204ENST00000426155 NDUFS5O43920 106 aa6.76□□□□□ -1.33
SNX3-204ENST00000426155 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
SNX3-204ENST00000426155 TP53AIP1Q9HCN2 124 aa6.75□□□□□ -1.33
SNX3-204ENST00000426155 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
SNX3-204ENST00000426155 CRCT1Q9UGL9 99 aa6.72□□□□□ -1.33
SNX3-204ENST00000426155 Q5W150 140 aa6.7□□□□□ -1.34
SNX3-204ENST00000426155 MT2AP02795 61 aa6.68□□□□□ -1.34
SNX3-204ENST00000426155 USH2AO75445 5202 aa6.67□□□□□ -1.34
SNX3-204ENST00000426155 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
SNX3-204ENST00000426155 PSPHP1O15172 72 aa6.66□□□□□ -1.34
SNX3-204ENST00000426155 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
SNX3-204ENST00000426155 MT1FP04733 61 aa6.64□□□□□ -1.35
SNX3-204ENST00000426155 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
SNX3-204ENST00000426155 A8MUN3 132 aa6.62□□□□□ -1.35
SNX3-204ENST00000426155 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
SNX3-204ENST00000426155 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
SNX3-204ENST00000426155 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
SNX3-204ENST00000426155 Q5VV11 94 aa6.6□□□□□ -1.35
SNX3-204ENST00000426155 COA5Q86WW8 74 aa6.6□□□□□ -1.35
SNX3-204ENST00000426155 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
SNX3-204ENST00000426155 PRR15LQ9BU68 103 aa6.59□□□□□ -1.35
SNX3-204ENST00000426155 SSPOA2VEC9 5147 aa6.59□□□□□ -1.36
SNX3-204ENST00000426155 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
SNX3-204ENST00000426155 SEC61GP60059 68 aa6.56□□□□□ -1.36
SNX3-204ENST00000426155 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
SNX3-204ENST00000426155 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
SNX3-204ENST00000426155 A6NED7 52 aa6.53□□□□□ -1.36
SNX3-204ENST00000426155 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
SNX3-204ENST00000426155 ACYP2P14621 99 aa6.46□□□□□ -1.38
SNX3-204ENST00000426155 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
SNX3-204ENST00000426155 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
SNX3-204ENST00000426155 LCA10Q71F78 164 aa6.4□□□□□ -1.38
SNX3-204ENST00000426155 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
SNX3-204ENST00000426155 A6NN06 94 aa6.37□□□□□ -1.39
SNX3-204ENST00000426155 S4R3F8 94 aa6.36□□□□□ -1.39
SNX3-204ENST00000426155 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
SNX3-204ENST00000426155 A8MU10 97 aa6.3□□□□□ -1.4
SNX3-204ENST00000426155 A0A1B0GU69 56 aa6.28□□□□□ -1.4
SNX3-204ENST00000426155 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
SNX3-204ENST00000426155 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
SNX3-204ENST00000426155 UQCR11O14957 56 aa6.22□□□□□ -1.41
SNX3-204ENST00000426155 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
SNX3-204ENST00000426155 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
SNX3-204ENST00000426155 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
SNX3-204ENST00000426155 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
SNX3-204ENST00000426155 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
SNX3-204ENST00000426155 MT1BP07438 61 aa6.1□□□□□ -1.43
SNX3-204ENST00000426155 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
SNX3-204ENST00000426155 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
SNX3-204ENST00000426155 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
SNX3-204ENST00000426155 H0YAA0 97 aa6.01□□□□□ -1.45
SNX3-204ENST00000426155 LINC01554Q52M75 96 aa6□□□□□ -1.45
SNX3-204ENST00000426155 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
SNX3-204ENST00000426155 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
SNX3-204ENST00000426155 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
SNX3-204ENST00000426155 K7ERS5 55 aa5.92□□□□□ -1.46
SNX3-204ENST00000426155 KRTAP10-5P60370 271 aa5.91□□□□□ -1.46
SNX3-204ENST00000426155 A0A1B0GU33 70 aa5.89□□□□□ -1.47
SNX3-204ENST00000426155 P0C880 135 aa5.89□□□□□ -1.47
SNX3-204ENST00000426155 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
SNX3-204ENST00000426155 R4GN34 69 aa5.82□□□□□ -1.48
SNX3-204ENST00000426155 M0QZ58 72 aa5.8□□□□□ -1.48
SNX3-204ENST00000426155 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
SNX3-204ENST00000426155 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
SNX3-204ENST00000426155 KMT2DO14686 5537 aa5.74□□□□□ -1.49
SNX3-204ENST00000426155 MT1XP80297 61 aa5.74□□□□□ -1.49
SNX3-204ENST00000426155 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
SNX3-204ENST00000426155 NEBP20929 6669 aa5.72□□□□□ -1.49
SNX3-204ENST00000426155 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
SNX3-204ENST00000426155 ROMO1P60602 79 aa5.66□□□□□ -1.5
SNX3-204ENST00000426155 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
SNX3-204ENST00000426155 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
SNX3-204ENST00000426155 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 313.8 ms