RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 PSPHP1O15172 72 aa7.29□□□□□ -1.24
CDK3-201ENST00000425876 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
CDK3-201ENST00000425876 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
CDK3-201ENST00000425876 Q5VV11 94 aa7.25□□□□□ -1.25
CDK3-201ENST00000425876 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
CDK3-201ENST00000425876 S4R3F8 94 aa7.21□□□□□ -1.25
CDK3-201ENST00000425876 A0A1B0GU69 56 aa7.2□□□□□ -1.26
CDK3-201ENST00000425876 LCA10Q71F78 164 aa7.19□□□□□ -1.26
CDK3-201ENST00000425876 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
CDK3-201ENST00000425876 MUC2Q02817 5179 aa7.18□□□□□ -1.26
CDK3-201ENST00000425876 SEC61GP60059 68 aa7.15□□□□□ -1.27
CDK3-201ENST00000425876 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
CDK3-201ENST00000425876 A6NED7 52 aa7.08□□□□□ -1.28
CDK3-201ENST00000425876 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
CDK3-201ENST00000425876 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
CDK3-201ENST00000425876 UQCR11O14957 56 aa7.02□□□□□ -1.29
CDK3-201ENST00000425876 SVIPQ8NHG7 77 aa7.01□□□□□ -1.29
CDK3-201ENST00000425876 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
CDK3-201ENST00000425876 PRO0628Q9UI54 55 aa7□□□□□ -1.29
CDK3-201ENST00000425876 FLGP20930 4061 aaPredicted RBP6.99□□□□□ -1.29
CDK3-201ENST00000425876 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
CDK3-201ENST00000425876 A0A1B0GU33 70 aa6.96□□□□□ -1.29
CDK3-201ENST00000425876 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.29
CDK3-201ENST00000425876 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.29
CDK3-201ENST00000425876 H0YAA0 97 aa6.95□□□□□ -1.3
CDK3-201ENST00000425876 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
CDK3-201ENST00000425876 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
CDK3-201ENST00000425876 A8MU10 97 aa6.91□□□□□ -1.3
CDK3-201ENST00000425876 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
CDK3-201ENST00000425876 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
CDK3-201ENST00000425876 P0C880 135 aa6.86□□□□□ -1.31
CDK3-201ENST00000425876 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
CDK3-201ENST00000425876 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
CDK3-201ENST00000425876 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
CDK3-201ENST00000425876 M0QZ58 72 aa6.75□□□□□ -1.33
CDK3-201ENST00000425876 MT1HP80294 61 aa6.71□□□□□ -1.34
CDK3-201ENST00000425876 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
CDK3-201ENST00000425876 A6NN06 94 aa6.66□□□□□ -1.34
CDK3-201ENST00000425876 R4GN34 69 aa6.65□□□□□ -1.34
CDK3-201ENST00000425876 M0R2T5 61 aa6.64□□□□□ -1.35
CDK3-201ENST00000425876 K7ERS5 55 aa6.62□□□□□ -1.35
CDK3-201ENST00000425876 A0A0D9SG42 100 aa6.61□□□□□ -1.35
CDK3-201ENST00000425876 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
CDK3-201ENST00000425876 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
CDK3-201ENST00000425876 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
CDK3-201ENST00000425876 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
CDK3-201ENST00000425876 KRTAP12-1P59990 96 aa6.52□□□□□ -1.36
CDK3-201ENST00000425876 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
CDK3-201ENST00000425876 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
CDK3-201ENST00000425876 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
CDK3-201ENST00000425876 MT2AP02795 61 aa6.48□□□□□ -1.37
CDK3-201ENST00000425876 SPINT4Q6UDR6 99 aa6.47□□□□□ -1.37
CDK3-201ENST00000425876 KTN1-AS1Q86SY8 53 aa6.47□□□□□ -1.37
CDK3-201ENST00000425876 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.37
CDK3-201ENST00000425876 MT1FP04733 61 aa6.43□□□□□ -1.38
CDK3-201ENST00000425876 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
CDK3-201ENST00000425876 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
CDK3-201ENST00000425876 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
CDK3-201ENST00000425876 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
CDK3-201ENST00000425876 ROMO1P60602 79 aa6.35□□□□□ -1.39
CDK3-201ENST00000425876 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
CDK3-201ENST00000425876 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
CDK3-201ENST00000425876 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
CDK3-201ENST00000425876 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
CDK3-201ENST00000425876 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
CDK3-201ENST00000425876 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
CDK3-201ENST00000425876 MT1BP07438 61 aa6.13□□□□□ -1.43
CDK3-201ENST00000425876 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
CDK3-201ENST00000425876 USH2AO75445 5202 aa6.1□□□□□ -1.43
CDK3-201ENST00000425876 SSPOA2VEC9 5147 aa6.09□□□□□ -1.43
CDK3-201ENST00000425876 LCE2BO14633 110 aa6.09□□□□□ -1.43
CDK3-201ENST00000425876 TNP1P09430 55 aa5.97□□□□□ -1.45
CDK3-201ENST00000425876 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
CDK3-201ENST00000425876 MT1XP80297 61 aa5.95□□□□□ -1.46
CDK3-201ENST00000425876 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
CDK3-201ENST00000425876 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
CDK3-201ENST00000425876 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
CDK3-201ENST00000425876 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
CDK3-201ENST00000425876 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
CDK3-201ENST00000425876 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
CDK3-201ENST00000425876 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CDK3-201ENST00000425876 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
CDK3-201ENST00000425876 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
CDK3-201ENST00000425876 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
CDK3-201ENST00000425876 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
CDK3-201ENST00000425876 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
CDK3-201ENST00000425876 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
CDK3-201ENST00000425876 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
CDK3-201ENST00000425876 KRTAP12-3P60328 96 aa5.46□□□□□ -1.53
CDK3-201ENST00000425876 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
CDK3-201ENST00000425876 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
CDK3-201ENST00000425876 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
CDK3-201ENST00000425876 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
CDK3-201ENST00000425876 KMT2DO14686 5537 aa5.38□□□□□ -1.55
CDK3-201ENST00000425876 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
CDK3-201ENST00000425876 NEBP20929 6669 aa5.36□□□□□ -1.55
CDK3-201ENST00000425876 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
CDK3-201ENST00000425876 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
CDK3-201ENST00000425876 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
CDK3-201ENST00000425876 MT1EP04732 61 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms