RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ACYP2P14621 99 aa11.54□□□□□ -0.56
APOE-202ENST00000425718 KRTAP9-8Q9BYQ0 159 aa11.48□□□□□ -0.57
APOE-202ENST00000425718 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
APOE-202ENST00000425718 MT2AP02795 61 aa11.4□□□□□ -0.58
APOE-202ENST00000425718 H7BZZ5 65 aa11.37□□□□□ -0.59
APOE-202ENST00000425718 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
APOE-202ENST00000425718 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
APOE-202ENST00000425718 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
APOE-202ENST00000425718 CHKB-CPT1BH3BT56 60 aa11.33□□□□□ -0.6
APOE-202ENST00000425718 CCDC179H3BU77 68 aa11.32□□□□□ -0.6
APOE-202ENST00000425718 MT1FP04733 61 aa11.29□□□□□ -0.6
APOE-202ENST00000425718 CYSTM1Q9H1C7 97 aa11.27□□□□□ -0.61
APOE-202ENST00000425718 H0YAA0 97 aa11.26□□□□□ -0.61
APOE-202ENST00000425718 ATP5EP56381 51 aaPredicted RBP11.21□□□□□ -0.61
APOE-202ENST00000425718 KRTAP9-2Q9BYQ4 174 aa11.2□□□□□ -0.62
APOE-202ENST00000425718 COA5Q86WW8 74 aa11.15□□□□□ -0.62
APOE-202ENST00000425718 KRTAP9-3Q9BYQ3 159 aa11.12□□□□□ -0.63
APOE-202ENST00000425718 CRIPTQ9P021 101 aa11.09□□□□□ -0.63
APOE-202ENST00000425718 TMEM258P61165 79 aa11.08□□□□□ -0.64
APOE-202ENST00000425718 ADM2Q7Z4H4 148 aa11.07□□□□□ -0.64
APOE-202ENST00000425718 SPRR2GQ9BYE4 73 aa10.9□□□□□ -0.66
APOE-202ENST00000425718 LCE2BO14633 110 aa10.87□□□□□ -0.67
APOE-202ENST00000425718 SEC61GP60059 68 aa10.86□□□□□ -0.67
APOE-202ENST00000425718 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
APOE-202ENST00000425718 P0C880 135 aa10.84□□□□□ -0.67
APOE-202ENST00000425718 PCP4P48539 62 aa10.84□□□□□ -0.67
APOE-202ENST00000425718 KRTAP19-1Q8IUB9 90 aa10.84□□□□□ -0.67
APOE-202ENST00000425718 R4GN34 69 aa10.82□□□□□ -0.68
APOE-202ENST00000425718 SERP1Q9Y6X1 66 aa10.79□□□□□ -0.68
APOE-202ENST00000425718 CRCT1Q9UGL9 99 aa10.73□□□□□ -0.69
APOE-202ENST00000425718 M0QZ58 72 aa10.71□□□□□ -0.69
APOE-202ENST00000425718 KRTAP19-8Q3LI54 63 aa10.71□□□□□ -0.69
APOE-202ENST00000425718 Q5VV11 94 aa10.71□□□□□ -0.69
APOE-202ENST00000425718 USH2AO75445 5202 aa10.69□□□□□ -0.7
APOE-202ENST00000425718 KRTAP9-6A0A140TA67 174 aa10.64□□□□□ -0.71
APOE-202ENST00000425718 FSIP2Q5CZC0 6907 aa10.63□□□□□ -0.71
APOE-202ENST00000425718 A0A1B0GU69 56 aa10.62□□□□□ -0.71
APOE-202ENST00000425718 PRR15LQ9BU68 103 aa10.59□□□□□ -0.71
APOE-202ENST00000425718 MT1BP07438 61 aa10.54□□□□□ -0.72
APOE-202ENST00000425718 LINC01558Q9Y6Z2 57 aa10.53□□□□□ -0.72
APOE-202ENST00000425718 A0A1B0GU33 70 aa10.5□□□□□ -0.73
APOE-202ENST00000425718 KRTAP19-6Q3LI70 58 aa10.49□□□□□ -0.73
APOE-202ENST00000425718 LINC01554Q52M75 96 aa10.48□□□□□ -0.73
APOE-202ENST00000425718 PLAC4Q8WY50 150 aa10.48□□□□□ -0.73
APOE-202ENST00000425718 SSPOA2VEC9 5147 aa10.45□□□□□ -0.74
APOE-202ENST00000425718 V9GYY9 64 aa10.45□□□□□ -0.74
APOE-202ENST00000425718 A6NN06 94 aa10.4□□□□□ -0.74
APOE-202ENST00000425718 RPS28P62857 69 aaKnown RBP10.38□□□□□ -0.75
APOE-202ENST00000425718 KRTAP13-4Q3LI77 160 aa10.35□□□□□ -0.75
APOE-202ENST00000425718 SMIM26A0A096LP01 95 aa10.34□□□□□ -0.75
APOE-202ENST00000425718 Q1T7F1 81 aa10.3□□□□□ -0.76
APOE-202ENST00000425718 SPATA8Q6RVD6 105 aa10.26□□□□□ -0.77
APOE-202ENST00000425718 PRO2289Q9P1D8 64 aa10.25□□□□□ -0.77
APOE-202ENST00000425718 KRTAP10-5P60370 271 aa10.24□□□□□ -0.77
APOE-202ENST00000425718 UQCR11O14957 56 aa10.2□□□□□ -0.78
APOE-202ENST00000425718 A0A0D9SG42 100 aa10.18□□□□□ -0.78
APOE-202ENST00000425718 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
APOE-202ENST00000425718 PSPHP1O15172 72 aa10.09□□□□□ -0.79
APOE-202ENST00000425718 MT1XP80297 61 aa10.05□□□□□ -0.8
APOE-202ENST00000425718 CAMK2N1Q7Z7J9 78 aa10.05□□□□□ -0.8
APOE-202ENST00000425718 SPINT4Q6UDR6 99 aa10.04□□□□□ -0.8
APOE-202ENST00000425718 A8MU10 97 aa9.99□□□□□ -0.81
APOE-202ENST00000425718 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
APOE-202ENST00000425718 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
APOE-202ENST00000425718 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.93□□□□□ -0.82
APOE-202ENST00000425718 KRTAP12-2P59991 146 aa9.9□□□□□ -0.82
APOE-202ENST00000425718 A6NED7 52 aa9.87□□□□□ -0.83
APOE-202ENST00000425718 K7ERS5 55 aa9.81□□□□□ -0.84
APOE-202ENST00000425718 MACF1Q9UPN3 7388 aaKnown RBP9.77□□□□□ -0.85
APOE-202ENST00000425718 KRTAP9-7A8MTY7 169 aa9.64□□□□□ -0.87
APOE-202ENST00000425718 KRTAP10-12P60413 245 aa9.6□□□□□ -0.87
APOE-202ENST00000425718 CDC42SE1Q9NRR8 79 aa9.59□□□□□ -0.87
APOE-202ENST00000425718 KRTAP10-7P60409 375 aaPredicted RBP9.58□□□□□ -0.88
APOE-202ENST00000425718 KRTAP6-3Q3LI67 103 aa9.56□□□□□ -0.88
APOE-202ENST00000425718 SYNE2Q8WXH0 6885 aaKnown RBP9.49□□□□□ -0.89
APOE-202ENST00000425718 TNP1P09430 55 aa9.47□□□□□ -0.89
APOE-202ENST00000425718 C10orf95Q9H7T3 257 aa9.46□□□□□ -0.9
APOE-202ENST00000425718 KRTAP8-1Q8IUC2 63 aa9.45□□□□□ -0.9
APOE-202ENST00000425718 KRTAP5-9P26371 169 aa9.37□□□□□ -0.91
APOE-202ENST00000425718 KMT2DO14686 5537 aa9.35□□□□□ -0.91
APOE-202ENST00000425718 KRTAP4-8A0A0G2JLE6 195 aa9.34□□□□□ -0.91
APOE-202ENST00000425718 KRTAP4-8Q9BYQ9 185 aa9.34□□□□□ -0.91
APOE-202ENST00000425718 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
APOE-202ENST00000425718 SPRR2FQ96RM1 72 aa9.24□□□□□ -0.93
APOE-202ENST00000425718 BRK1Q8WUW1 75 aa9.2□□□□□ -0.94
APOE-202ENST00000425718 ROMO1P60602 79 aa9.15□□□□□ -0.94
APOE-202ENST00000425718 LCE3AQ5TA76 89 aa9.05□□□□□ -0.96
APOE-202ENST00000425718 MUC12Q9UKN1 5478 aa9.05□□□□□ -0.96
APOE-202ENST00000425718 KRTAP23-1A1A580 65 aa9□□□□□ -0.97
APOE-202ENST00000425718 SPRR2EP22531 72 aa8.96□□□□□ -0.98
APOE-202ENST00000425718 SPRR2BP35325 72 aa8.96□□□□□ -0.98
APOE-202ENST00000425718 SPRR2AP35326 72 aa8.96□□□□□ -0.98
APOE-202ENST00000425718 KRTAP19-7Q3SYF9 63 aa8.96□□□□□ -0.98
APOE-202ENST00000425718 KRTAP19-5Q3LI72 72 aa8.92□□□□□ -0.98
APOE-202ENST00000425718 NEBP20929 6669 aa8.89□□□□□ -0.99
APOE-202ENST00000425718 MT1EP04732 61 aa8.89□□□□□ -0.99
APOE-202ENST00000425718 LCE1AQ5T7P2 110 aa8.89□□□□□ -0.99
APOE-202ENST00000425718 MDN1Q9NU22 5596 aa8.88□□□□□ -0.99
APOE-202ENST00000425718 PP632Q6XCG6 107 aa8.84□□□□□ -0.99
APOE-202ENST00000425718 KRTAP12-3P60328 96 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms