RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 COX7CP15954 63 aa4.04□□□□□ -1.76
MDC1-204ENST00000422266 MP68P56378 58 aa4.04□□□□□ -1.76
MDC1-204ENST00000422266 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
MDC1-204ENST00000422266 C5orf47Q569G3 176 aa4.04□□□□□ -1.76
MDC1-204ENST00000422266 LINC00208Q96KT6 92 aa4.03□□□□□ -1.76
MDC1-204ENST00000422266 SSPOA2VEC9 5147 aa4.03□□□□□ -1.77
MDC1-204ENST00000422266 LOC101927531A0A1B0GV80 90 aa4.02□□□□□ -1.77
MDC1-204ENST00000422266 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
MDC1-204ENST00000422266 H3BPC8 53 aa4.01□□□□□ -1.77
MDC1-204ENST00000422266 CYP4F30PQ9H0H9 118 aa4.01□□□□□ -1.77
MDC1-204ENST00000422266 SNURFQ9Y675 71 aa4.01□□□□□ -1.77
MDC1-204ENST00000422266 CCDC179H3BU77 68 aa4□□□□□ -1.77
MDC1-204ENST00000422266 KLKP1Q107X0 134 aa4□□□□□ -1.77
MDC1-204ENST00000422266 CYSTM1Q9H1C7 97 aa4□□□□□ -1.77
MDC1-204ENST00000422266 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
MDC1-204ENST00000422266 LCA10Q71F78 164 aa3.99□□□□□ -1.77
MDC1-204ENST00000422266 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
MDC1-204ENST00000422266 A8MUN3 132 aa3.94□□□□□ -1.78
MDC1-204ENST00000422266 Q5VV11 94 aa3.94□□□□□ -1.78
MDC1-204ENST00000422266 CRIPTQ9P021 101 aa3.94□□□□□ -1.78
MDC1-204ENST00000422266 H7BZZ5 65 aa3.93□□□□□ -1.78
MDC1-204ENST00000422266 NDUFC1O43677 76 aa3.93□□□□□ -1.78
MDC1-204ENST00000422266 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
MDC1-204ENST00000422266 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
MDC1-204ENST00000422266 A6NN06 94 aa3.89□□□□□ -1.79
MDC1-204ENST00000422266 H0YAA0 97 aa3.89□□□□□ -1.79
MDC1-204ENST00000422266 KRTAP3-3Q9BYR6 98 aa3.89□□□□□ -1.79
MDC1-204ENST00000422266 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
MDC1-204ENST00000422266 SPANXA2-OT1Q8N9U9 137 aa3.88□□□□□ -1.79
MDC1-204ENST00000422266 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
MDC1-204ENST00000422266 DMAC1Q96GE9 116 aa3.87□□□□□ -1.79
MDC1-204ENST00000422266 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
MDC1-204ENST00000422266 MT1BP07438 61 aa3.84□□□□□ -1.79
MDC1-204ENST00000422266 TMEM258P61165 79 aa3.84□□□□□ -1.79
MDC1-204ENST00000422266 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
MDC1-204ENST00000422266 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
MDC1-204ENST00000422266 ACYP2P14621 99 aa3.79□□□□□ -1.8
MDC1-204ENST00000422266 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
MDC1-204ENST00000422266 COA5Q86WW8 74 aa3.79□□□□□ -1.8
MDC1-204ENST00000422266 PRO2289Q9P1D8 64 aa3.77□□□□□ -1.81
MDC1-204ENST00000422266 R4GN34 69 aa3.75□□□□□ -1.81
MDC1-204ENST00000422266 CHKB-CPT1BH3BT56 60 aa3.74□□□□□ -1.81
MDC1-204ENST00000422266 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
MDC1-204ENST00000422266 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
MDC1-204ENST00000422266 SVIPQ8NHG7 77 aa3.72□□□□□ -1.81
MDC1-204ENST00000422266 SERP1Q9Y6X1 66 aa3.71□□□□□ -1.82
MDC1-204ENST00000422266 NEBP20929 6669 aa3.7□□□□□ -1.82
MDC1-204ENST00000422266 M0QZ58 72 aa3.68□□□□□ -1.82
MDC1-204ENST00000422266 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
MDC1-204ENST00000422266 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
MDC1-204ENST00000422266 P0C880 135 aa3.65□□□□□ -1.83
MDC1-204ENST00000422266 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
MDC1-204ENST00000422266 KRTAP3-2Q9BYR7 98 aa3.62□□□□□ -1.83
MDC1-204ENST00000422266 MT1XP80297 61 aa3.61□□□□□ -1.83
MDC1-204ENST00000422266 LINC01554Q52M75 96 aa3.61□□□□□ -1.83
MDC1-204ENST00000422266 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
MDC1-204ENST00000422266 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
MDC1-204ENST00000422266 SMIM26A0A096LP01 95 aa3.58□□□□□ -1.84
MDC1-204ENST00000422266 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
MDC1-204ENST00000422266 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
MDC1-204ENST00000422266 A0A1B0GU69 56 aa3.55□□□□□ -1.84
MDC1-204ENST00000422266 Q1T7F1 81 aa3.55□□□□□ -1.84
MDC1-204ENST00000422266 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
MDC1-204ENST00000422266 KMT2DO14686 5537 aa3.54□□□□□ -1.84
MDC1-204ENST00000422266 SEC61GP60059 68 aa3.53□□□□□ -1.84
MDC1-204ENST00000422266 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
MDC1-204ENST00000422266 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
MDC1-204ENST00000422266 V9GYY9 64 aa3.52□□□□□ -1.85
MDC1-204ENST00000422266 PSPHP1O15172 72 aa3.51□□□□□ -1.85
MDC1-204ENST00000422266 SPRR2EP22531 72 aa3.5□□□□□ -1.85
MDC1-204ENST00000422266 SPRR2BP35325 72 aa3.5□□□□□ -1.85
MDC1-204ENST00000422266 SPRR2AP35326 72 aa3.5□□□□□ -1.85
MDC1-204ENST00000422266 KRTAP13-4Q3LI77 160 aa3.5□□□□□ -1.85
MDC1-204ENST00000422266 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
MDC1-204ENST00000422266 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
MDC1-204ENST00000422266 A0A1B0GU33 70 aa3.47□□□□□ -1.85
MDC1-204ENST00000422266 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
MDC1-204ENST00000422266 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
MDC1-204ENST00000422266 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
MDC1-204ENST00000422266 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
MDC1-204ENST00000422266 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
MDC1-204ENST00000422266 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
MDC1-204ENST00000422266 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
MDC1-204ENST00000422266 UQCR11O14957 56 aa3.41□□□□□ -1.86
MDC1-204ENST00000422266 A8MU10 97 aa3.4□□□□□ -1.87
MDC1-204ENST00000422266 SPRR2DP22532 72 aa3.4□□□□□ -1.87
MDC1-204ENST00000422266 A0A0D9SG42 100 aa3.39□□□□□ -1.87
MDC1-204ENST00000422266 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
MDC1-204ENST00000422266 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
MDC1-204ENST00000422266 A6NED7 52 aa3.38□□□□□ -1.87
MDC1-204ENST00000422266 MIR22HGQ0VDD5 57 aa3.38□□□□□ -1.87
MDC1-204ENST00000422266 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
MDC1-204ENST00000422266 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
MDC1-204ENST00000422266 CDC42SE1Q9NRR8 79 aa3.32□□□□□ -1.88
MDC1-204ENST00000422266 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
MDC1-204ENST00000422266 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
MDC1-204ENST00000422266 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
MDC1-204ENST00000422266 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
MDC1-204ENST00000422266 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
MDC1-204ENST00000422266 MT1EP04732 61 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms