RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 IMUPQ9GZP8 106 aa6.46□□□□□ -1.38
TMEM248-203ENST00000418375 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
TMEM248-203ENST00000418375 USH2AO75445 5202 aa6.44□□□□□ -1.38
TMEM248-203ENST00000418375 MT2AP02795 61 aa6.44□□□□□ -1.38
TMEM248-203ENST00000418375 MP68P56378 58 aa6.44□□□□□ -1.38
TMEM248-203ENST00000418375 MT-ATP8P03928 68 aa6.43□□□□□ -1.38
TMEM248-203ENST00000418375 C5orf47Q569G3 176 aa6.41□□□□□ -1.38
TMEM248-203ENST00000418375 LINC00208Q96KT6 92 aa6.41□□□□□ -1.38
TMEM248-203ENST00000418375 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
TMEM248-203ENST00000418375 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
TMEM248-203ENST00000418375 MT1FP04733 61 aa6.39□□□□□ -1.39
TMEM248-203ENST00000418375 S4R3F8 94 aa6.38□□□□□ -1.39
TMEM248-203ENST00000418375 H3BPC8 53 aa6.37□□□□□ -1.39
TMEM248-203ENST00000418375 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
TMEM248-203ENST00000418375 KRTAP9-7A8MTY7 169 aa6.35□□□□□ -1.39
TMEM248-203ENST00000418375 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
TMEM248-203ENST00000418375 FAM236AA0A1B0GUQ0 79 aa6.34□□□□□ -1.39
TMEM248-203ENST00000418375 FAM236BA0A1B0GV22 79 aa6.34□□□□□ -1.39
TMEM248-203ENST00000418375 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
TMEM248-203ENST00000418375 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
TMEM248-203ENST00000418375 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
TMEM248-203ENST00000418375 KLKP1Q107X0 134 aa6.32□□□□□ -1.4
TMEM248-203ENST00000418375 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
TMEM248-203ENST00000418375 LCA10Q71F78 164 aa6.31□□□□□ -1.4
TMEM248-203ENST00000418375 A8MUN3 132 aa6.3□□□□□ -1.4
TMEM248-203ENST00000418375 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
TMEM248-203ENST00000418375 TRAV7A0A075B6U4 112 aa6.29□□□□□ -1.4
TMEM248-203ENST00000418375 H3BS24 57 aa6.27□□□□□ -1.41
TMEM248-203ENST00000418375 NDUFC1O43677 76 aa6.21□□□□□ -1.42
TMEM248-203ENST00000418375 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
TMEM248-203ENST00000418375 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
TMEM248-203ENST00000418375 SERP2Q8N6R1 65 aa6.16□□□□□ -1.42
TMEM248-203ENST00000418375 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
TMEM248-203ENST00000418375 SNURFQ9Y675 71 aa6.12□□□□□ -1.43
TMEM248-203ENST00000418375 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
TMEM248-203ENST00000418375 C20orf197Q8N268 126 aa6.1□□□□□ -1.43
TMEM248-203ENST00000418375 H0YAA0 97 aa6.08□□□□□ -1.44
TMEM248-203ENST00000418375 ACYP2P14621 99 aa6.08□□□□□ -1.44
TMEM248-203ENST00000418375 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
TMEM248-203ENST00000418375 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
TMEM248-203ENST00000418375 COX7CP15954 63 aa6.02□□□□□ -1.45
TMEM248-203ENST00000418375 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
TMEM248-203ENST00000418375 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
TMEM248-203ENST00000418375 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
TMEM248-203ENST00000418375 SPTSSBQ8NFR3 76 aa6□□□□□ -1.45
TMEM248-203ENST00000418375 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
TMEM248-203ENST00000418375 Q5VV11 94 aa5.95□□□□□ -1.46
TMEM248-203ENST00000418375 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
TMEM248-203ENST00000418375 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
TMEM248-203ENST00000418375 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
TMEM248-203ENST00000418375 MT1BP07438 61 aa5.89□□□□□ -1.47
TMEM248-203ENST00000418375 P0C880 135 aa5.89□□□□□ -1.47
TMEM248-203ENST00000418375 H7BZZ5 65 aa5.87□□□□□ -1.47
TMEM248-203ENST00000418375 R4GN34 69 aa5.87□□□□□ -1.47
TMEM248-203ENST00000418375 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
TMEM248-203ENST00000418375 COA5Q86WW8 74 aa5.84□□□□□ -1.47
TMEM248-203ENST00000418375 A6NN06 94 aa5.83□□□□□ -1.48
TMEM248-203ENST00000418375 M0QZ58 72 aa5.82□□□□□ -1.48
TMEM248-203ENST00000418375 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
TMEM248-203ENST00000418375 KRTAP5-3Q6L8H2 238 aa5.78□□□□□ -1.48
TMEM248-203ENST00000418375 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
TMEM248-203ENST00000418375 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
TMEM248-203ENST00000418375 LINC01554Q52M75 96 aa5.72□□□□□ -1.49
TMEM248-203ENST00000418375 SEC61GP60059 68 aa5.7□□□□□ -1.5
TMEM248-203ENST00000418375 ATP5EP56381 51 aaPredicted RBP5.69□□□□□ -1.5
TMEM248-203ENST00000418375 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
TMEM248-203ENST00000418375 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
TMEM248-203ENST00000418375 NEBP20929 6669 aa5.67□□□□□ -1.5
TMEM248-203ENST00000418375 PCP4P48539 62 aa5.65□□□□□ -1.5
TMEM248-203ENST00000418375 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
TMEM248-203ENST00000418375 TMEM258P61165 79 aa5.61□□□□□ -1.51
TMEM248-203ENST00000418375 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
TMEM248-203ENST00000418375 MT1XP80297 61 aa5.58□□□□□ -1.52
TMEM248-203ENST00000418375 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
TMEM248-203ENST00000418375 A0A1B0GU69 56 aa5.56□□□□□ -1.52
TMEM248-203ENST00000418375 KMT2DO14686 5537 aa5.55□□□□□ -1.52
TMEM248-203ENST00000418375 A0A1B0GU33 70 aa5.55□□□□□ -1.52
TMEM248-203ENST00000418375 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
TMEM248-203ENST00000418375 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
TMEM248-203ENST00000418375 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
TMEM248-203ENST00000418375 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
TMEM248-203ENST00000418375 A0A0D9SG42 100 aa5.47□□□□□ -1.53
TMEM248-203ENST00000418375 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
TMEM248-203ENST00000418375 LINC01558Q9Y6Z2 57 aa5.44□□□□□ -1.54
TMEM248-203ENST00000418375 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
TMEM248-203ENST00000418375 SMIM26A0A096LP01 95 aa5.41□□□□□ -1.54
TMEM248-203ENST00000418375 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
TMEM248-203ENST00000418375 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
TMEM248-203ENST00000418375 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
TMEM248-203ENST00000418375 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
TMEM248-203ENST00000418375 SPRR2EP22531 72 aa5.36□□□□□ -1.55
TMEM248-203ENST00000418375 SPRR2BP35325 72 aa5.36□□□□□ -1.55
TMEM248-203ENST00000418375 SPRR2AP35326 72 aa5.36□□□□□ -1.55
TMEM248-203ENST00000418375 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
TMEM248-203ENST00000418375 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
TMEM248-203ENST00000418375 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
TMEM248-203ENST00000418375 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
TMEM248-203ENST00000418375 A8MU10 97 aa5.32□□□□□ -1.56
TMEM248-203ENST00000418375 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
TMEM248-203ENST00000418375 UQCR11O14957 56 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms