RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
SSBP3-205ENST00000417664 A0A1B0GU69 56 aa8.53□□□□□ -1.04
SSBP3-205ENST00000417664 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
SSBP3-205ENST00000417664 SEC61GP60059 68 aa8.46□□□□□ -1.05
SSBP3-205ENST00000417664 BRK1Q8WUW1 75 aa8.45□□□□□ -1.06
SSBP3-205ENST00000417664 S4R3F8 94 aa8.45□□□□□ -1.06
SSBP3-205ENST00000417664 A6NED7 52 aa8.43□□□□□ -1.06
SSBP3-205ENST00000417664 LCA10Q71F78 164 aa8.42□□□□□ -1.06
SSBP3-205ENST00000417664 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
SSBP3-205ENST00000417664 PRO0628Q9UI54 55 aa8.4□□□□□ -1.06
SSBP3-205ENST00000417664 KRTAP4-1Q9BYQ7 146 aa8.34□□□□□ -1.08
SSBP3-205ENST00000417664 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.08
SSBP3-205ENST00000417664 MUC17Q685J3 4493 aa8.33□□□□□ -1.08
SSBP3-205ENST00000417664 UQCR11O14957 56 aa8.33□□□□□ -1.08
SSBP3-205ENST00000417664 LOC100996750A0A140TA64 210 aa8.29□□□□□ -1.08
SSBP3-205ENST00000417664 KRTAP4-6Q9BYQ5 205 aa8.29□□□□□ -1.08
SSBP3-205ENST00000417664 HERC1Q15751 4861 aa8.27□□□□□ -1.08
SSBP3-205ENST00000417664 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
SSBP3-205ENST00000417664 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
SSBP3-205ENST00000417664 SPATA8Q6RVD6 105 aa8.24□□□□□ -1.09
SSBP3-205ENST00000417664 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
SSBP3-205ENST00000417664 A0A1B0GU33 70 aa8.21□□□□□ -1.09
SSBP3-205ENST00000417664 A8MU10 97 aa8.19□□□□□ -1.1
SSBP3-205ENST00000417664 KRTAP19-2Q3LHN2 52 aa8.18□□□□□ -1.1
SSBP3-205ENST00000417664 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-205ENST00000417664 H0YAA0 97 aa8.14□□□□□ -1.11
SSBP3-205ENST00000417664 ADM2Q7Z4H4 148 aa8.08□□□□□ -1.12
SSBP3-205ENST00000417664 P0C880 135 aa8.04□□□□□ -1.12
SSBP3-205ENST00000417664 PMAIP1Q13794 54 aa8.02□□□□□ -1.13
SSBP3-205ENST00000417664 MUC2Q02817 5179 aa7.98□□□□□ -1.13
SSBP3-205ENST00000417664 FLGP20930 4061 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-205ENST00000417664 M0QZ58 72 aa7.95□□□□□ -1.14
SSBP3-205ENST00000417664 A6NN06 94 aa7.93□□□□□ -1.14
SSBP3-205ENST00000417664 KRTAP13-4Q3LI77 160 aa7.92□□□□□ -1.14
SSBP3-205ENST00000417664 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
SSBP3-205ENST00000417664 K7ERS5 55 aa7.87□□□□□ -1.15
SSBP3-205ENST00000417664 R4GN34 69 aa7.82□□□□□ -1.16
SSBP3-205ENST00000417664 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
SSBP3-205ENST00000417664 A0A0D9SG42 100 aa7.79□□□□□ -1.16
SSBP3-205ENST00000417664 RNF213Q63HN8 5207 aa7.78□□□□□ -1.16
SSBP3-205ENST00000417664 MT1HP80294 61 aa7.75□□□□□ -1.17
SSBP3-205ENST00000417664 KTN1-AS1Q86SY8 53 aa7.75□□□□□ -1.17
SSBP3-205ENST00000417664 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
SSBP3-205ENST00000417664 M0R2T5 61 aa7.71□□□□□ -1.18
SSBP3-205ENST00000417664 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-205ENST00000417664 LCE2BO14633 110 aa7.67□□□□□ -1.18
SSBP3-205ENST00000417664 KRTAP12-1P59990 96 aa7.67□□□□□ -1.18
SSBP3-205ENST00000417664 H3BS24 57 aa7.65□□□□□ -1.18
SSBP3-205ENST00000417664 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
SSBP3-205ENST00000417664 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
SSBP3-205ENST00000417664 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
SSBP3-205ENST00000417664 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
SSBP3-205ENST00000417664 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
SSBP3-205ENST00000417664 ROMO1P60602 79 aa7.53□□□□□ -1.2
SSBP3-205ENST00000417664 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
SSBP3-205ENST00000417664 MT2AP02795 61 aa7.48□□□□□ -1.21
SSBP3-205ENST00000417664 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
SSBP3-205ENST00000417664 KRTAP10-10P60014 251 aa7.45□□□□□ -1.22
SSBP3-205ENST00000417664 MT1FP04733 61 aa7.43□□□□□ -1.22
SSBP3-205ENST00000417664 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
SSBP3-205ENST00000417664 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
SSBP3-205ENST00000417664 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
SSBP3-205ENST00000417664 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
SSBP3-205ENST00000417664 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
SSBP3-205ENST00000417664 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
SSBP3-205ENST00000417664 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
SSBP3-205ENST00000417664 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
SSBP3-205ENST00000417664 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
SSBP3-205ENST00000417664 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
SSBP3-205ENST00000417664 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-205ENST00000417664 KRTAP9-2Q9BYQ4 174 aa7.12□□□□□ -1.27
SSBP3-205ENST00000417664 KRTAP9-6A0A140TA67 174 aa7.09□□□□□ -1.27
SSBP3-205ENST00000417664 MT1BP07438 61 aa7.09□□□□□ -1.27
SSBP3-205ENST00000417664 TNP1P09430 55 aa7.03□□□□□ -1.28
SSBP3-205ENST00000417664 PP632Q6XCG6 107 aa6.97□□□□□ -1.29
SSBP3-205ENST00000417664 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
SSBP3-205ENST00000417664 MT1XP80297 61 aa6.9□□□□□ -1.3
SSBP3-205ENST00000417664 KRTAP10-5P60370 271 aa6.9□□□□□ -1.31
SSBP3-205ENST00000417664 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.31
SSBP3-205ENST00000417664 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
SSBP3-205ENST00000417664 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
SSBP3-205ENST00000417664 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
SSBP3-205ENST00000417664 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
SSBP3-205ENST00000417664 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
SSBP3-205ENST00000417664 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
SSBP3-205ENST00000417664 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
SSBP3-205ENST00000417664 USH2AO75445 5202 aa6.63□□□□□ -1.35
SSBP3-205ENST00000417664 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-205ENST00000417664 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
SSBP3-205ENST00000417664 KRTAP4-12Q9BQ66 201 aa6.55□□□□□ -1.36
SSBP3-205ENST00000417664 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
SSBP3-205ENST00000417664 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
SSBP3-205ENST00000417664 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
SSBP3-205ENST00000417664 KRTAP12-3P60328 96 aa6.4□□□□□ -1.38
SSBP3-205ENST00000417664 KRTAP4-2Q9BYR5 136 aa6.4□□□□□ -1.38
SSBP3-205ENST00000417664 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
SSBP3-205ENST00000417664 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
SSBP3-205ENST00000417664 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
SSBP3-205ENST00000417664 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
SSBP3-205ENST00000417664 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms