RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 ATOX1O00244 68 aa6.3□□□□□ -1.4
LINC01398-201ENST00000416581 FAM236AA0A1B0GUQ0 79 aa6.29□□□□□ -1.4
LINC01398-201ENST00000416581 FAM236BA0A1B0GV22 79 aa6.29□□□□□ -1.4
LINC01398-201ENST00000416581 H0Y9P7 68 aa6.29□□□□□ -1.4
LINC01398-201ENST00000416581 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
LINC01398-201ENST00000416581 C5orf47Q569G3 176 aa6.26□□□□□ -1.41
LINC01398-201ENST00000416581 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
LINC01398-201ENST00000416581 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
LINC01398-201ENST00000416581 MP68P56378 58 aa6.25□□□□□ -1.41
LINC01398-201ENST00000416581 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
LINC01398-201ENST00000416581 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
LINC01398-201ENST00000416581 TRAV7A0A075B6U4 112 aa6.22□□□□□ -1.41
LINC01398-201ENST00000416581 H3BPC8 53 aa6.22□□□□□ -1.41
LINC01398-201ENST00000416581 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
LINC01398-201ENST00000416581 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
LINC01398-201ENST00000416581 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
LINC01398-201ENST00000416581 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
LINC01398-201ENST00000416581 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
LINC01398-201ENST00000416581 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.42
LINC01398-201ENST00000416581 ANAPC13Q9BS18 74 aa6.15□□□□□ -1.42
LINC01398-201ENST00000416581 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
LINC01398-201ENST00000416581 A6NN06 94 aa6.12□□□□□ -1.43
LINC01398-201ENST00000416581 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
LINC01398-201ENST00000416581 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
LINC01398-201ENST00000416581 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
LINC01398-201ENST00000416581 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
LINC01398-201ENST00000416581 Q5VV11 94 aa6.1□□□□□ -1.43
LINC01398-201ENST00000416581 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
LINC01398-201ENST00000416581 S4R3F8 94 aa6.08□□□□□ -1.44
LINC01398-201ENST00000416581 A8MUN3 132 aa6.05□□□□□ -1.44
LINC01398-201ENST00000416581 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
LINC01398-201ENST00000416581 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
LINC01398-201ENST00000416581 COX7CP15954 63 aa6.04□□□□□ -1.44
LINC01398-201ENST00000416581 C20orf197Q8N268 126 aa6.04□□□□□ -1.44
LINC01398-201ENST00000416581 SNURFQ9Y675 71 aa6.04□□□□□ -1.44
LINC01398-201ENST00000416581 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
LINC01398-201ENST00000416581 MT1BP07438 61 aa6.01□□□□□ -1.45
LINC01398-201ENST00000416581 CCDC179H3BU77 68 aa5.99□□□□□ -1.45
LINC01398-201ENST00000416581 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
LINC01398-201ENST00000416581 LCA10Q71F78 164 aa5.98□□□□□ -1.45
LINC01398-201ENST00000416581 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
LINC01398-201ENST00000416581 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
LINC01398-201ENST00000416581 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.46
LINC01398-201ENST00000416581 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
LINC01398-201ENST00000416581 NDUFC1O43677 76 aa5.92□□□□□ -1.46
LINC01398-201ENST00000416581 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
LINC01398-201ENST00000416581 ACYP2P14621 99 aa5.9□□□□□ -1.46
LINC01398-201ENST00000416581 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
LINC01398-201ENST00000416581 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
LINC01398-201ENST00000416581 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
LINC01398-201ENST00000416581 H7BZZ5 65 aa5.86□□□□□ -1.47
LINC01398-201ENST00000416581 CYSTM1Q9H1C7 97 aa5.86□□□□□ -1.47
LINC01398-201ENST00000416581 TMEM258P61165 79 aa5.85□□□□□ -1.47
LINC01398-201ENST00000416581 KMT2DO14686 5537 aa5.84□□□□□ -1.47
LINC01398-201ENST00000416581 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
LINC01398-201ENST00000416581 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
LINC01398-201ENST00000416581 H0YAA0 97 aa5.81□□□□□ -1.48
LINC01398-201ENST00000416581 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
LINC01398-201ENST00000416581 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
LINC01398-201ENST00000416581 SPTSSBQ8NFR3 76 aa5.77□□□□□ -1.49
LINC01398-201ENST00000416581 COA5Q86WW8 74 aa5.73□□□□□ -1.49
LINC01398-201ENST00000416581 ATP5EP56381 51 aaPredicted RBP5.72□□□□□ -1.49
LINC01398-201ENST00000416581 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
LINC01398-201ENST00000416581 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
LINC01398-201ENST00000416581 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
LINC01398-201ENST00000416581 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
LINC01398-201ENST00000416581 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
LINC01398-201ENST00000416581 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
LINC01398-201ENST00000416581 KRTAP2-2Q9BYT5 123 aa5.65□□□□□ -1.5
LINC01398-201ENST00000416581 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
LINC01398-201ENST00000416581 SPRR2EP22531 72 aa5.63□□□□□ -1.51
LINC01398-201ENST00000416581 SPRR2BP35325 72 aa5.63□□□□□ -1.51
LINC01398-201ENST00000416581 SPRR2AP35326 72 aa5.63□□□□□ -1.51
LINC01398-201ENST00000416581 P0C880 135 aa5.61□□□□□ -1.51
LINC01398-201ENST00000416581 R4GN34 69 aa5.61□□□□□ -1.51
LINC01398-201ENST00000416581 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
LINC01398-201ENST00000416581 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
LINC01398-201ENST00000416581 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
LINC01398-201ENST00000416581 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
LINC01398-201ENST00000416581 MT1XP80297 61 aa5.58□□□□□ -1.52
LINC01398-201ENST00000416581 SEC61GP60059 68 aa5.52□□□□□ -1.53
LINC01398-201ENST00000416581 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
LINC01398-201ENST00000416581 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
LINC01398-201ENST00000416581 M0QZ58 72 aa5.5□□□□□ -1.53
LINC01398-201ENST00000416581 SPRR2DP22532 72 aa5.46□□□□□ -1.54
LINC01398-201ENST00000416581 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
LINC01398-201ENST00000416581 A0A1B0GU69 56 aa5.43□□□□□ -1.54
LINC01398-201ENST00000416581 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
LINC01398-201ENST00000416581 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
LINC01398-201ENST00000416581 Q1T7F1 81 aa5.4□□□□□ -1.54
LINC01398-201ENST00000416581 LINC01558Q9Y6Z2 57 aa5.4□□□□□ -1.54
LINC01398-201ENST00000416581 A0A1B0GU33 70 aa5.38□□□□□ -1.55
LINC01398-201ENST00000416581 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
LINC01398-201ENST00000416581 V9GYY9 64 aa5.38□□□□□ -1.55
LINC01398-201ENST00000416581 KRTAP13-4Q3LI77 160 aa5.37□□□□□ -1.55
LINC01398-201ENST00000416581 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
LINC01398-201ENST00000416581 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
LINC01398-201ENST00000416581 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
LINC01398-201ENST00000416581 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
LINC01398-201ENST00000416581 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms