RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 IGKV2D-30A0A075B6S6 120 aa10.38□□□□□ -0.75
PTPRU-203ENST00000415600 C7orf65Q6ZTY9 151 aa10.36□□□□□ -0.75
PTPRU-203ENST00000415600 HRES1P13985 223 aa10.34□□□□□ -0.75
PTPRU-203ENST00000415600 KRTAP9-8Q9BYQ0 159 aa10.24□□□□□ -0.77
PTPRU-203ENST00000415600 MPLKIPQ8TAP9 179 aa10.23□□□□□ -0.77
PTPRU-203ENST00000415600 DMAC1Q96GE9 116 aa10.22□□□□□ -0.77
PTPRU-203ENST00000415600 SMIM26A0A096LP01 95 aa10.22□□□□□ -0.77
PTPRU-203ENST00000415600 SPINK7P58062 85 aa10.21□□□□□ -0.78
PTPRU-203ENST00000415600 COA5Q86WW8 74 aa10.2□□□□□ -0.78
PTPRU-203ENST00000415600 ACYP2P14621 99 aa10.17□□□□□ -0.78
PTPRU-203ENST00000415600 MT2AP02795 61 aa10.09□□□□□ -0.79
PTPRU-203ENST00000415600 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
PTPRU-203ENST00000415600 A8MUN3 132 aa10.09□□□□□ -0.79
PTPRU-203ENST00000415600 KRTAP10-10P60014 251 aa10.05□□□□□ -0.8
PTPRU-203ENST00000415600 CHKB-CPT1BH3BT56 60 aa10□□□□□ -0.81
PTPRU-203ENST00000415600 MT1FP04733 61 aa10□□□□□ -0.81
PTPRU-203ENST00000415600 Q1T7F1 81 aa9.99□□□□□ -0.81
PTPRU-203ENST00000415600 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
PTPRU-203ENST00000415600 USH2AO75445 5202 aa9.96□□□□□ -0.82
PTPRU-203ENST00000415600 V9GYY9 64 aa9.96□□□□□ -0.82
PTPRU-203ENST00000415600 KRTAP9-3Q9BYQ3 159 aa9.92□□□□□ -0.82
PTPRU-203ENST00000415600 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
PTPRU-203ENST00000415600 SSPOA2VEC9 5147 aa9.88□□□□□ -0.83
PTPRU-203ENST00000415600 LCE2BO14633 110 aa9.88□□□□□ -0.83
PTPRU-203ENST00000415600 LINC01558Q9Y6Z2 57 aa9.85□□□□□ -0.83
PTPRU-203ENST00000415600 KRTAP9-7A8MTY7 169 aa9.84□□□□□ -0.83
PTPRU-203ENST00000415600 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
PTPRU-203ENST00000415600 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
PTPRU-203ENST00000415600 SPTSSBQ8NFR3 76 aa9.79□□□□□ -0.84
PTPRU-203ENST00000415600 PSPHP1O15172 72 aa9.77□□□□□ -0.85
PTPRU-203ENST00000415600 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
PTPRU-203ENST00000415600 FCGBPQ9Y6R7 5405 aaPredicted RBP9.74□□□□□ -0.85
PTPRU-203ENST00000415600 Q5VV11 94 aa9.71□□□□□ -0.85
PTPRU-203ENST00000415600 S4R3F8 94 aa9.67□□□□□ -0.86
PTPRU-203ENST00000415600 A0A1B0GU69 56 aa9.64□□□□□ -0.87
PTPRU-203ENST00000415600 LCA10Q71F78 164 aa9.64□□□□□ -0.87
PTPRU-203ENST00000415600 KRTAP19-6Q3LI70 58 aa9.63□□□□□ -0.87
PTPRU-203ENST00000415600 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
PTPRU-203ENST00000415600 SEC61GP60059 68 aa9.54□□□□□ -0.88
PTPRU-203ENST00000415600 MACF1Q9UPN3 7388 aaKnown RBP9.49□□□□□ -0.89
PTPRU-203ENST00000415600 A6NED7 52 aa9.48□□□□□ -0.89
PTPRU-203ENST00000415600 BRK1Q8WUW1 75 aa9.47□□□□□ -0.89
PTPRU-203ENST00000415600 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
PTPRU-203ENST00000415600 SYNE2Q8WXH0 6885 aaKnown RBP9.4□□□□□ -0.9
PTPRU-203ENST00000415600 UQCR11O14957 56 aa9.37□□□□□ -0.91
PTPRU-203ENST00000415600 CDC42SE1Q9NRR8 79 aa9.36□□□□□ -0.91
PTPRU-203ENST00000415600 PRO0628Q9UI54 55 aa9.34□□□□□ -0.91
PTPRU-203ENST00000415600 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
PTPRU-203ENST00000415600 A0A1B0GU33 70 aa9.3□□□□□ -0.92
PTPRU-203ENST00000415600 A8MU10 97 aa9.29□□□□□ -0.92
PTPRU-203ENST00000415600 SPATA8Q6RVD6 105 aa9.29□□□□□ -0.92
PTPRU-203ENST00000415600 MIR22HGQ0VDD5 57 aa9.28□□□□□ -0.92
PTPRU-203ENST00000415600 H0YAA0 97 aa9.27□□□□□ -0.93
PTPRU-203ENST00000415600 KRTAP6-3Q3LI67 103 aa9.25□□□□□ -0.93
PTPRU-203ENST00000415600 ADM2Q7Z4H4 148 aa9.24□□□□□ -0.93
PTPRU-203ENST00000415600 A6NN06 94 aa9.21□□□□□ -0.93
PTPRU-203ENST00000415600 SPRR2GQ9BYE4 73 aa9.21□□□□□ -0.93
PTPRU-203ENST00000415600 P0C880 135 aa9.2□□□□□ -0.94
PTPRU-203ENST00000415600 KRTAP19-8Q3LI54 63 aa9.15□□□□□ -0.95
PTPRU-203ENST00000415600 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
PTPRU-203ENST00000415600 MT1BP07438 61 aa9.13□□□□□ -0.95
PTPRU-203ENST00000415600 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
PTPRU-203ENST00000415600 M0QZ58 72 aa9.01□□□□□ -0.97
PTPRU-203ENST00000415600 KRTAP10-5P60370 271 aa9.01□□□□□ -0.97
PTPRU-203ENST00000415600 PMAIP1Q13794 54 aa8.95□□□□□ -0.98
PTPRU-203ENST00000415600 R4GN34 69 aa8.9□□□□□ -0.99
PTPRU-203ENST00000415600 A0A0D9SG42 100 aa8.88□□□□□ -0.99
PTPRU-203ENST00000415600 NEBP20929 6669 aa8.86□□□□□ -0.99
PTPRU-203ENST00000415600 SVIPQ8NHG7 77 aa8.85□□□□□ -0.99
PTPRU-203ENST00000415600 K7ERS5 55 aa8.83□□□□□ -1
PTPRU-203ENST00000415600 PRO2289Q9P1D8 64 aa8.78□□□□□ -1
PTPRU-203ENST00000415600 MUC12Q9UKN1 5478 aa8.77□□□□□ -1.01
PTPRU-203ENST00000415600 KRTAP5-9P26371 169 aa8.75□□□□□ -1.01
PTPRU-203ENST00000415600 KRTAP12-1P59990 96 aa8.74□□□□□ -1.01
PTPRU-203ENST00000415600 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
PTPRU-203ENST00000415600 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
PTPRU-203ENST00000415600 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
PTPRU-203ENST00000415600 SPINT4Q6UDR6 99 aa8.68□□□□□ -1.02
PTPRU-203ENST00000415600 KRTAP20-1Q3LI63 56 aa8.65□□□□□ -1.03
PTPRU-203ENST00000415600 KTN1-AS1Q86SY8 53 aa8.65□□□□□ -1.03
PTPRU-203ENST00000415600 KMT2DO14686 5537 aa8.6□□□□□ -1.03
PTPRU-203ENST00000415600 MT1XP80297 61 aa8.55□□□□□ -1.04
PTPRU-203ENST00000415600 MDN1Q9NU22 5596 aa8.54□□□□□ -1.04
PTPRU-203ENST00000415600 SPRR2FQ96RM1 72 aa8.5□□□□□ -1.05
PTPRU-203ENST00000415600 ROMO1P60602 79 aa8.49□□□□□ -1.05
PTPRU-203ENST00000415600 KRTAP8-1Q8IUC2 63 aa8.45□□□□□ -1.06
PTPRU-203ENST00000415600 SPRR2EP22531 72 aa8.4□□□□□ -1.06
PTPRU-203ENST00000415600 SPRR2BP35325 72 aa8.4□□□□□ -1.06
PTPRU-203ENST00000415600 SPRR2AP35326 72 aa8.4□□□□□ -1.06
PTPRU-203ENST00000415600 KRTAP2-3P0C7H8 128 aa8.39□□□□□ -1.07
PTPRU-203ENST00000415600 KRTAP2-4Q9BYR9 128 aa8.39□□□□□ -1.07
PTPRU-203ENST00000415600 PRAC1Q96KF2 57 aa8.37□□□□□ -1.07
PTPRU-203ENST00000415600 CAMK2N1Q7Z7J9 78 aa8.35□□□□□ -1.07
PTPRU-203ENST00000415600 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
PTPRU-203ENST00000415600 LCE1AQ5T7P2 110 aa8.22□□□□□ -1.09
PTPRU-203ENST00000415600 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
PTPRU-203ENST00000415600 KRTAP4-8A0A0G2JLE6 195 aa8.18□□□□□ -1.1
PTPRU-203ENST00000415600 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
PTPRU-203ENST00000415600 KRTAP10-12P60413 245 aa8.15□□□□□ -1.1
PTPRU-203ENST00000415600 KRTAP10-7P60409 375 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms