RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 SMIM26A0A096LP01 95 aa7.08□□□□□ -1.28
HMGA1P1-201ENST00000415560 LCA10Q71F78 164 aa7.05□□□□□ -1.28
HMGA1P1-201ENST00000415560 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
HMGA1P1-201ENST00000415560 V9GYY9 64 aa7.02□□□□□ -1.29
HMGA1P1-201ENST00000415560 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
HMGA1P1-201ENST00000415560 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
HMGA1P1-201ENST00000415560 RNF213Q63HN8 5207 aa6.97□□□□□ -1.29
HMGA1P1-201ENST00000415560 Q1T7F1 81 aa6.95□□□□□ -1.3
HMGA1P1-201ENST00000415560 SEC61GP60059 68 aa6.94□□□□□ -1.3
HMGA1P1-201ENST00000415560 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
HMGA1P1-201ENST00000415560 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
HMGA1P1-201ENST00000415560 PRR15LQ9BU68 103 aa6.91□□□□□ -1.3
HMGA1P1-201ENST00000415560 MUC2Q02817 5179 aa6.88□□□□□ -1.31
HMGA1P1-201ENST00000415560 A0A1B0GU69 56 aa6.88□□□□□ -1.31
HMGA1P1-201ENST00000415560 M0R2T5 61 aa6.87□□□□□ -1.31
HMGA1P1-201ENST00000415560 H0YAA0 97 aa6.82□□□□□ -1.32
HMGA1P1-201ENST00000415560 MT1HP80294 61 aa6.82□□□□□ -1.32
HMGA1P1-201ENST00000415560 PSPHP1O15172 72 aa6.8□□□□□ -1.32
HMGA1P1-201ENST00000415560 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
HMGA1P1-201ENST00000415560 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
HMGA1P1-201ENST00000415560 Q5VV11 94 aa6.72□□□□□ -1.33
HMGA1P1-201ENST00000415560 A0A1B0GU33 70 aa6.7□□□□□ -1.34
HMGA1P1-201ENST00000415560 FAT4Q6V0I7 4981 aa6.7□□□□□ -1.34
HMGA1P1-201ENST00000415560 KRTAP10-6P60371 365 aaPredicted RBP6.69□□□□□ -1.34
HMGA1P1-201ENST00000415560 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
HMGA1P1-201ENST00000415560 UQCR11O14957 56 aa6.67□□□□□ -1.34
HMGA1P1-201ENST00000415560 P0C880 135 aa6.66□□□□□ -1.34
HMGA1P1-201ENST00000415560 A6NED7 52 aa6.64□□□□□ -1.35
HMGA1P1-201ENST00000415560 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
HMGA1P1-201ENST00000415560 M0QZ58 72 aa6.6□□□□□ -1.35
HMGA1P1-201ENST00000415560 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
HMGA1P1-201ENST00000415560 R4GN34 69 aa6.58□□□□□ -1.36
HMGA1P1-201ENST00000415560 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
HMGA1P1-201ENST00000415560 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
HMGA1P1-201ENST00000415560 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
HMGA1P1-201ENST00000415560 KRTAP9-8Q9BYQ0 159 aa6.55□□□□□ -1.36
HMGA1P1-201ENST00000415560 MT2AP02795 61 aa6.53□□□□□ -1.36
HMGA1P1-201ENST00000415560 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
HMGA1P1-201ENST00000415560 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
HMGA1P1-201ENST00000415560 MT1FP04733 61 aa6.47□□□□□ -1.37
HMGA1P1-201ENST00000415560 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
HMGA1P1-201ENST00000415560 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
HMGA1P1-201ENST00000415560 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
HMGA1P1-201ENST00000415560 A0A0D9SG42 100 aa6.41□□□□□ -1.38
HMGA1P1-201ENST00000415560 A8MU10 97 aa6.39□□□□□ -1.39
HMGA1P1-201ENST00000415560 K7ERS5 55 aa6.38□□□□□ -1.39
HMGA1P1-201ENST00000415560 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
HMGA1P1-201ENST00000415560 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
HMGA1P1-201ENST00000415560 A6NN06 94 aa6.33□□□□□ -1.4
HMGA1P1-201ENST00000415560 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
HMGA1P1-201ENST00000415560 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
HMGA1P1-201ENST00000415560 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
HMGA1P1-201ENST00000415560 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
HMGA1P1-201ENST00000415560 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
HMGA1P1-201ENST00000415560 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
HMGA1P1-201ENST00000415560 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
HMGA1P1-201ENST00000415560 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
HMGA1P1-201ENST00000415560 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
HMGA1P1-201ENST00000415560 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
HMGA1P1-201ENST00000415560 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
HMGA1P1-201ENST00000415560 LCE2BO14633 110 aa6.14□□□□□ -1.43
HMGA1P1-201ENST00000415560 MT1BP07438 61 aa6.11□□□□□ -1.43
HMGA1P1-201ENST00000415560 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
HMGA1P1-201ENST00000415560 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
HMGA1P1-201ENST00000415560 ROMO1P60602 79 aa6.01□□□□□ -1.45
HMGA1P1-201ENST00000415560 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
HMGA1P1-201ENST00000415560 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
HMGA1P1-201ENST00000415560 USH2AO75445 5202 aa5.91□□□□□ -1.46
HMGA1P1-201ENST00000415560 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
HMGA1P1-201ENST00000415560 MT1XP80297 61 aa5.89□□□□□ -1.47
HMGA1P1-201ENST00000415560 TNP1P09430 55 aa5.86□□□□□ -1.47
HMGA1P1-201ENST00000415560 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
HMGA1P1-201ENST00000415560 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
HMGA1P1-201ENST00000415560 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
HMGA1P1-201ENST00000415560 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
HMGA1P1-201ENST00000415560 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
HMGA1P1-201ENST00000415560 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
HMGA1P1-201ENST00000415560 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
HMGA1P1-201ENST00000415560 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
HMGA1P1-201ENST00000415560 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
HMGA1P1-201ENST00000415560 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
HMGA1P1-201ENST00000415560 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
HMGA1P1-201ENST00000415560 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
HMGA1P1-201ENST00000415560 LCE3AQ5TA76 89 aa5.53□□□□□ -1.52
HMGA1P1-201ENST00000415560 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
HMGA1P1-201ENST00000415560 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
HMGA1P1-201ENST00000415560 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
HMGA1P1-201ENST00000415560 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
HMGA1P1-201ENST00000415560 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
HMGA1P1-201ENST00000415560 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
HMGA1P1-201ENST00000415560 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
HMGA1P1-201ENST00000415560 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
HMGA1P1-201ENST00000415560 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
HMGA1P1-201ENST00000415560 KMT2DO14686 5537 aa5.25□□□□□ -1.57
HMGA1P1-201ENST00000415560 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
HMGA1P1-201ENST00000415560 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
HMGA1P1-201ENST00000415560 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
HMGA1P1-201ENST00000415560 H3BS24 57 aa5.21□□□□□ -1.58
HMGA1P1-201ENST00000415560 MT1EP04732 61 aa5.18□□□□□ -1.58
HMGA1P1-201ENST00000415560 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms