RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 A0A1B0GU69 56 aa7.25□□□□□ -1.25
SSR4P1-201ENST00000415143 SPINK7P58062 85 aa7.25□□□□□ -1.25
SSR4P1-201ENST00000415143 SEC61GP60059 68 aa7.22□□□□□ -1.25
SSR4P1-201ENST00000415143 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
SSR4P1-201ENST00000415143 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
SSR4P1-201ENST00000415143 LPAP08519 4548 aa7.19□□□□□ -1.26
SSR4P1-201ENST00000415143 MUC2Q02817 5179 aa7.17□□□□□ -1.26
SSR4P1-201ENST00000415143 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
SSR4P1-201ENST00000415143 UQCR11O14957 56 aa7.12□□□□□ -1.27
SSR4P1-201ENST00000415143 XP32Q5T750 250 aa7.12□□□□□ -1.27
SSR4P1-201ENST00000415143 LCA10Q71F78 164 aa7.12□□□□□ -1.27
SSR4P1-201ENST00000415143 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
SSR4P1-201ENST00000415143 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
SSR4P1-201ENST00000415143 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
SSR4P1-201ENST00000415143 SPATA8Q6RVD6 105 aa7.05□□□□□ -1.28
SSR4P1-201ENST00000415143 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
SSR4P1-201ENST00000415143 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
SSR4P1-201ENST00000415143 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
SSR4P1-201ENST00000415143 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
SSR4P1-201ENST00000415143 A8MU10 97 aa6.98□□□□□ -1.29
SSR4P1-201ENST00000415143 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
SSR4P1-201ENST00000415143 A0A1B0GU33 70 aa6.92□□□□□ -1.3
SSR4P1-201ENST00000415143 A6NN06 94 aa6.92□□□□□ -1.3
SSR4P1-201ENST00000415143 S4R3F8 94 aa6.92□□□□□ -1.3
SSR4P1-201ENST00000415143 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.3
SSR4P1-201ENST00000415143 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
SSR4P1-201ENST00000415143 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
SSR4P1-201ENST00000415143 KTN1-AS1Q86SY8 53 aa6.88□□□□□ -1.31
SSR4P1-201ENST00000415143 K7ERS5 55 aa6.8□□□□□ -1.32
SSR4P1-201ENST00000415143 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
SSR4P1-201ENST00000415143 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
SSR4P1-201ENST00000415143 H0YAA0 97 aa6.74□□□□□ -1.33
SSR4P1-201ENST00000415143 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
SSR4P1-201ENST00000415143 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
SSR4P1-201ENST00000415143 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
SSR4P1-201ENST00000415143 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
SSR4P1-201ENST00000415143 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
SSR4P1-201ENST00000415143 M0QZ58 72 aa6.59□□□□□ -1.35
SSR4P1-201ENST00000415143 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
SSR4P1-201ENST00000415143 P0C880 135 aa6.54□□□□□ -1.36
SSR4P1-201ENST00000415143 A0A0D9SG42 100 aa6.5□□□□□ -1.37
SSR4P1-201ENST00000415143 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
SSR4P1-201ENST00000415143 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
SSR4P1-201ENST00000415143 ROMO1P60602 79 aa6.45□□□□□ -1.38
SSR4P1-201ENST00000415143 KRTAP4-1Q9BYQ7 146 aa6.44□□□□□ -1.38
SSR4P1-201ENST00000415143 R4GN34 69 aa6.41□□□□□ -1.38
SSR4P1-201ENST00000415143 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
SSR4P1-201ENST00000415143 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
SSR4P1-201ENST00000415143 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
SSR4P1-201ENST00000415143 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
SSR4P1-201ENST00000415143 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
SSR4P1-201ENST00000415143 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
SSR4P1-201ENST00000415143 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
SSR4P1-201ENST00000415143 MT1HP80294 61 aa6.31□□□□□ -1.4
SSR4P1-201ENST00000415143 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
SSR4P1-201ENST00000415143 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
SSR4P1-201ENST00000415143 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
SSR4P1-201ENST00000415143 USH2AO75445 5202 aa6.19□□□□□ -1.42
SSR4P1-201ENST00000415143 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
SSR4P1-201ENST00000415143 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
SSR4P1-201ENST00000415143 M0R2T5 61 aa6.17□□□□□ -1.42
SSR4P1-201ENST00000415143 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
SSR4P1-201ENST00000415143 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
SSR4P1-201ENST00000415143 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
SSR4P1-201ENST00000415143 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
SSR4P1-201ENST00000415143 C10orf95Q9H7T3 257 aa5.97□□□□□ -1.45
SSR4P1-201ENST00000415143 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
SSR4P1-201ENST00000415143 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
SSR4P1-201ENST00000415143 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
SSR4P1-201ENST00000415143 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
SSR4P1-201ENST00000415143 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
SSR4P1-201ENST00000415143 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
SSR4P1-201ENST00000415143 TNP1P09430 55 aa5.85□□□□□ -1.47
SSR4P1-201ENST00000415143 NEBP20929 6669 aa5.85□□□□□ -1.47
SSR4P1-201ENST00000415143 LCE2BO14633 110 aa5.83□□□□□ -1.48
SSR4P1-201ENST00000415143 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
SSR4P1-201ENST00000415143 MT2AP02795 61 aa5.82□□□□□ -1.48
SSR4P1-201ENST00000415143 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
SSR4P1-201ENST00000415143 MT1FP04733 61 aa5.77□□□□□ -1.49
SSR4P1-201ENST00000415143 KRTAP19-8Q3LI54 63 aa5.72□□□□□ -1.49
SSR4P1-201ENST00000415143 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
SSR4P1-201ENST00000415143 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
SSR4P1-201ENST00000415143 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
SSR4P1-201ENST00000415143 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
SSR4P1-201ENST00000415143 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
SSR4P1-201ENST00000415143 MT1BP07438 61 aa5.54□□□□□ -1.52
SSR4P1-201ENST00000415143 KMT2DO14686 5537 aa5.46□□□□□ -1.54
SSR4P1-201ENST00000415143 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
SSR4P1-201ENST00000415143 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
SSR4P1-201ENST00000415143 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
SSR4P1-201ENST00000415143 MT1XP80297 61 aa5.44□□□□□ -1.54
SSR4P1-201ENST00000415143 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
SSR4P1-201ENST00000415143 MDN1Q9NU22 5596 aa5.43□□□□□ -1.54
SSR4P1-201ENST00000415143 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
SSR4P1-201ENST00000415143 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
SSR4P1-201ENST00000415143 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
SSR4P1-201ENST00000415143 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
SSR4P1-201ENST00000415143 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
SSR4P1-201ENST00000415143 H3BS24 57 aa5.31□□□□□ -1.56
SSR4P1-201ENST00000415143 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms