RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 S4R3F8 94 aa8.81□□□□□ -1
TRIM56-202ENST00000412507 LINC00208Q96KT6 92 aa8.8□□□□□ -1
TRIM56-202ENST00000412507 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
TRIM56-202ENST00000412507 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
TRIM56-202ENST00000412507 COX7CP15954 63 aa8.76□□□□□ -1.01
TRIM56-202ENST00000412507 LCA10Q71F78 164 aa8.76□□□□□ -1.01
TRIM56-202ENST00000412507 KRTAP9-7A8MTY7 169 aa8.74□□□□□ -1.01
TRIM56-202ENST00000412507 FCGBPQ9Y6R7 5405 aaPredicted RBP8.74□□□□□ -1.01
TRIM56-202ENST00000412507 CSAG1Q6PB30 78 aa8.72□□□□□ -1.01
TRIM56-202ENST00000412507 C20orf197Q8N268 126 aa8.71□□□□□ -1.02
TRIM56-202ENST00000412507 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.7□□□□□ -1.02
TRIM56-202ENST00000412507 KLKP1Q107X0 134 aa8.66□□□□□ -1.02
TRIM56-202ENST00000412507 SNURFQ9Y675 71 aa8.65□□□□□ -1.02
TRIM56-202ENST00000412507 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
TRIM56-202ENST00000412507 KRTAP19-6Q3LI70 58 aa8.63□□□□□ -1.03
TRIM56-202ENST00000412507 NDUFC1O43677 76 aa8.59□□□□□ -1.03
TRIM56-202ENST00000412507 CCDC179H3BU77 68 aa8.55□□□□□ -1.04
TRIM56-202ENST00000412507 A8MUN3 132 aa8.51□□□□□ -1.05
TRIM56-202ENST00000412507 SPANXA2-OT1Q8N9U9 137 aa8.5□□□□□ -1.05
TRIM56-202ENST00000412507 H7BZZ5 65 aa8.47□□□□□ -1.05
TRIM56-202ENST00000412507 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
TRIM56-202ENST00000412507 PCP4P48539 62 aa8.44□□□□□ -1.06
TRIM56-202ENST00000412507 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
TRIM56-202ENST00000412507 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
TRIM56-202ENST00000412507 MT1BP07438 61 aa8.42□□□□□ -1.06
TRIM56-202ENST00000412507 KRTAP19-8Q3LI54 63 aa8.41□□□□□ -1.06
TRIM56-202ENST00000412507 Q5VV11 94 aa8.41□□□□□ -1.06
TRIM56-202ENST00000412507 ACYP2P14621 99 aa8.38□□□□□ -1.07
TRIM56-202ENST00000412507 MACF1Q9UPN3 7388 aaKnown RBP8.38□□□□□ -1.07
TRIM56-202ENST00000412507 H0YAA0 97 aa8.35□□□□□ -1.07
TRIM56-202ENST00000412507 ATP5EP56381 51 aaPredicted RBP8.35□□□□□ -1.07
TRIM56-202ENST00000412507 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
TRIM56-202ENST00000412507 TMEM258P61165 79 aa8.33□□□□□ -1.08
TRIM56-202ENST00000412507 SYNE2Q8WXH0 6885 aaKnown RBP8.32□□□□□ -1.08
TRIM56-202ENST00000412507 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
TRIM56-202ENST00000412507 A6NN06 94 aa8.28□□□□□ -1.08
TRIM56-202ENST00000412507 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
TRIM56-202ENST00000412507 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
TRIM56-202ENST00000412507 COA5Q86WW8 74 aa8.2□□□□□ -1.1
TRIM56-202ENST00000412507 SPTSSBQ8NFR3 76 aa8.2□□□□□ -1.1
TRIM56-202ENST00000412507 KRTAP6-3Q3LI67 103 aa8.14□□□□□ -1.11
TRIM56-202ENST00000412507 P0C880 135 aa8.13□□□□□ -1.11
TRIM56-202ENST00000412507 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
TRIM56-202ENST00000412507 R4GN34 69 aa8.07□□□□□ -1.12
TRIM56-202ENST00000412507 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
TRIM56-202ENST00000412507 M0QZ58 72 aa8.03□□□□□ -1.12
TRIM56-202ENST00000412507 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
TRIM56-202ENST00000412507 RPS28P62857 69 aaKnown RBP7.91□□□□□ -1.14
TRIM56-202ENST00000412507 MT1XP80297 61 aa7.91□□□□□ -1.14
TRIM56-202ENST00000412507 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
TRIM56-202ENST00000412507 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
TRIM56-202ENST00000412507 SEC61GP60059 68 aa7.89□□□□□ -1.15
TRIM56-202ENST00000412507 MUC12Q9UKN1 5478 aa7.83□□□□□ -1.16
TRIM56-202ENST00000412507 SMIM26A0A096LP01 95 aa7.81□□□□□ -1.16
TRIM56-202ENST00000412507 NEBP20929 6669 aa7.81□□□□□ -1.16
TRIM56-202ENST00000412507 KRTAP5-9P26371 169 aa7.8□□□□□ -1.16
TRIM56-202ENST00000412507 A0A1B0GU69 56 aa7.79□□□□□ -1.16
TRIM56-202ENST00000412507 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
TRIM56-202ENST00000412507 V9GYY9 64 aa7.79□□□□□ -1.16
TRIM56-202ENST00000412507 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
TRIM56-202ENST00000412507 KMT2DO14686 5537 aa7.77□□□□□ -1.17
TRIM56-202ENST00000412507 Q1T7F1 81 aa7.72□□□□□ -1.17
TRIM56-202ENST00000412507 KRTAP12-2P59991 146 aa7.69□□□□□ -1.18
TRIM56-202ENST00000412507 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
TRIM56-202ENST00000412507 A0A1B0GU33 70 aa7.64□□□□□ -1.19
TRIM56-202ENST00000412507 MDN1Q9NU22 5596 aa7.63□□□□□ -1.19
TRIM56-202ENST00000412507 KRTAP20-1Q3LI63 56 aa7.61□□□□□ -1.19
TRIM56-202ENST00000412507 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
TRIM56-202ENST00000412507 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
TRIM56-202ENST00000412507 KRTAP10-7P60409 375 aaPredicted RBP7.57□□□□□ -1.2
TRIM56-202ENST00000412507 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
TRIM56-202ENST00000412507 PSPHP1O15172 72 aa7.56□□□□□ -1.2
TRIM56-202ENST00000412507 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
TRIM56-202ENST00000412507 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
TRIM56-202ENST00000412507 UQCR11O14957 56 aa7.51□□□□□ -1.21
TRIM56-202ENST00000412507 SPRR2EP22531 72 aa7.48□□□□□ -1.21
TRIM56-202ENST00000412507 SPRR2BP35325 72 aa7.48□□□□□ -1.21
TRIM56-202ENST00000412507 SPRR2AP35326 72 aa7.48□□□□□ -1.21
TRIM56-202ENST00000412507 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
TRIM56-202ENST00000412507 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
TRIM56-202ENST00000412507 A0A0D9SG42 100 aa7.42□□□□□ -1.22
TRIM56-202ENST00000412507 A6NED7 52 aa7.38□□□□□ -1.23
TRIM56-202ENST00000412507 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
TRIM56-202ENST00000412507 LCE1AQ5T7P2 110 aa7.38□□□□□ -1.23
TRIM56-202ENST00000412507 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
TRIM56-202ENST00000412507 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
TRIM56-202ENST00000412507 A8MU10 97 aa7.31□□□□□ -1.24
TRIM56-202ENST00000412507 SPINT4Q6UDR6 99 aa7.31□□□□□ -1.24
TRIM56-202ENST00000412507 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
TRIM56-202ENST00000412507 SPRR2DP22532 72 aa7.22□□□□□ -1.25
TRIM56-202ENST00000412507 CDC42SE1Q9NRR8 79 aa7.21□□□□□ -1.26
TRIM56-202ENST00000412507 K7ERS5 55 aa7.19□□□□□ -1.26
TRIM56-202ENST00000412507 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
TRIM56-202ENST00000412507 KRTAP2-1Q9BYU5 128 aa7.09□□□□□ -1.27
TRIM56-202ENST00000412507 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
TRIM56-202ENST00000412507 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
TRIM56-202ENST00000412507 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
TRIM56-202ENST00000412507 MT1EP04732 61 aa7.01□□□□□ -1.29
TRIM56-202ENST00000412507 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
TRIM56-202ENST00000412507 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms