RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 S4R3F8 94 aa12.29□□□□□ -0.44
C2orf88-204ENST00000409870 NDUFC1O43677 76 aa12.28□□□□□ -0.44
C2orf88-204ENST00000409870 MT2AP02795 61 aa12.28□□□□□ -0.44
C2orf88-204ENST00000409870 USH2AO75445 5202 aa12.24□□□□□ -0.45
C2orf88-204ENST00000409870 LCA10Q71F78 164 aa12.21□□□□□ -0.45
C2orf88-204ENST00000409870 A8MUN3 132 aa12.2□□□□□ -0.46
C2orf88-204ENST00000409870 MT1FP04733 61 aa12.19□□□□□ -0.46
C2orf88-204ENST00000409870 SSPOA2VEC9 5147 aa12.18□□□□□ -0.46
C2orf88-204ENST00000409870 KRTAP10-10P60014 251 aa12.12□□□□□ -0.47
C2orf88-204ENST00000409870 CSAG1Q6PB30 78 aa12.11□□□□□ -0.47
C2orf88-204ENST00000409870 KRTAP3-3Q9BYR6 98 aa12.11□□□□□ -0.47
C2orf88-204ENST00000409870 H7BZZ5 65 aa12.1□□□□□ -0.47
C2orf88-204ENST00000409870 CYSTM1Q9H1C7 97 aa12.09□□□□□ -0.47
C2orf88-204ENST00000409870 DMAC1Q96GE9 116 aa12.05□□□□□ -0.48
C2orf88-204ENST00000409870 SPANXA2-OT1Q8N9U9 137 aa12.04□□□□□ -0.48
C2orf88-204ENST00000409870 TMEM258P61165 79 aa12.02□□□□□ -0.49
C2orf88-204ENST00000409870 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.99□□□□□ -0.49
C2orf88-204ENST00000409870 KRTAP9-3Q9BYQ3 159 aa11.99□□□□□ -0.49
C2orf88-204ENST00000409870 LCE2BO14633 110 aa11.98□□□□□ -0.49
C2orf88-204ENST00000409870 ATP5EP56381 51 aaPredicted RBP11.98□□□□□ -0.49
C2orf88-204ENST00000409870 FCGBPQ9Y6R7 5405 aaPredicted RBP11.89□□□□□ -0.51
C2orf88-204ENST00000409870 KRTAP9-7A8MTY7 169 aa11.89□□□□□ -0.51
C2orf88-204ENST00000409870 KRTAP19-1Q8IUB9 90 aa11.86□□□□□ -0.51
C2orf88-204ENST00000409870 ACYP2P14621 99 aa11.83□□□□□ -0.52
C2orf88-204ENST00000409870 H0YAA0 97 aa11.76□□□□□ -0.53
C2orf88-204ENST00000409870 MACF1Q9UPN3 7388 aaKnown RBP11.68□□□□□ -0.54
C2orf88-204ENST00000409870 SERP1Q9Y6X1 66 aa11.63□□□□□ -0.55
C2orf88-204ENST00000409870 CHKB-CPT1BH3BT56 60 aa11.61□□□□□ -0.55
C2orf88-204ENST00000409870 KRTAP19-6Q3LI70 58 aa11.61□□□□□ -0.55
C2orf88-204ENST00000409870 ADM2Q7Z4H4 148 aa11.61□□□□□ -0.55
C2orf88-204ENST00000409870 COA5Q86WW8 74 aa11.6□□□□□ -0.55
C2orf88-204ENST00000409870 SPTSSBQ8NFR3 76 aa11.59□□□□□ -0.55
C2orf88-204ENST00000409870 SPRR2GQ9BYE4 73 aa11.58□□□□□ -0.56
C2orf88-204ENST00000409870 CRIPTQ9P021 101 aa11.57□□□□□ -0.56
C2orf88-204ENST00000409870 RPS28P62857 69 aaKnown RBP11.52□□□□□ -0.56
C2orf88-204ENST00000409870 SYNE2Q8WXH0 6885 aaKnown RBP11.51□□□□□ -0.57
C2orf88-204ENST00000409870 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
C2orf88-204ENST00000409870 P0C880 135 aa11.43□□□□□ -0.58
C2orf88-204ENST00000409870 KRTAP19-8Q3LI54 63 aa11.42□□□□□ -0.58
C2orf88-204ENST00000409870 Q5VV11 94 aa11.35□□□□□ -0.59
C2orf88-204ENST00000409870 MT1BP07438 61 aa11.34□□□□□ -0.59
C2orf88-204ENST00000409870 SMIM26A0A096LP01 95 aa11.31□□□□□ -0.6
C2orf88-204ENST00000409870 R4GN34 69 aa11.28□□□□□ -0.6
C2orf88-204ENST00000409870 M0QZ58 72 aa11.22□□□□□ -0.61
C2orf88-204ENST00000409870 V9GYY9 64 aa11.2□□□□□ -0.62
C2orf88-204ENST00000409870 KRTAP6-3Q3LI67 103 aa11.14□□□□□ -0.63
C2orf88-204ENST00000409870 Q1T7F1 81 aa11.12□□□□□ -0.63
C2orf88-204ENST00000409870 SEC61GP60059 68 aa11.11□□□□□ -0.63
C2orf88-204ENST00000409870 LINC01558Q9Y6Z2 57 aa11.1□□□□□ -0.63
C2orf88-204ENST00000409870 PRR15LQ9BU68 103 aa11.07□□□□□ -0.64
C2orf88-204ENST00000409870 A0A1B0GU69 56 aa11.04□□□□□ -0.64
C2orf88-204ENST00000409870 A6NN06 94 aa11.02□□□□□ -0.64
C2orf88-204ENST00000409870 LINC01554Q52M75 96 aa11.01□□□□□ -0.65
C2orf88-204ENST00000409870 KRTAP10-5P60370 271 aa10.96□□□□□ -0.65
C2orf88-204ENST00000409870 PLAC4Q8WY50 150 aa10.95□□□□□ -0.66
C2orf88-204ENST00000409870 KRTAP13-4Q3LI77 160 aa10.92□□□□□ -0.66
C2orf88-204ENST00000409870 PSPHP1O15172 72 aa10.86□□□□□ -0.67
C2orf88-204ENST00000409870 NEBP20929 6669 aa10.84□□□□□ -0.67
C2orf88-204ENST00000409870 A0A1B0GU33 70 aa10.81□□□□□ -0.68
C2orf88-204ENST00000409870 MUC12Q9UKN1 5478 aa10.78□□□□□ -0.68
C2orf88-204ENST00000409870 MT1XP80297 61 aa10.76□□□□□ -0.69
C2orf88-204ENST00000409870 PRO2289Q9P1D8 64 aa10.75□□□□□ -0.69
C2orf88-204ENST00000409870 SPATA8Q6RVD6 105 aa10.7□□□□□ -0.7
C2orf88-204ENST00000409870 UQCR11O14957 56 aa10.68□□□□□ -0.7
C2orf88-204ENST00000409870 A6NED7 52 aa10.62□□□□□ -0.71
C2orf88-204ENST00000409870 A0A0D9SG42 100 aa10.6□□□□□ -0.71
C2orf88-204ENST00000409870 KRTAP5-9P26371 169 aa10.58□□□□□ -0.72
C2orf88-204ENST00000409870 MIR22HGQ0VDD5 57 aa10.51□□□□□ -0.73
C2orf88-204ENST00000409870 KMT2DO14686 5537 aa10.49□□□□□ -0.73
C2orf88-204ENST00000409870 MDN1Q9NU22 5596 aa10.46□□□□□ -0.73
C2orf88-204ENST00000409870 CAMK2N1Q7Z7J9 78 aa10.45□□□□□ -0.74
C2orf88-204ENST00000409870 KRTAP12-1P59990 96 aa10.44□□□□□ -0.74
C2orf88-204ENST00000409870 A8MU10 97 aa10.42□□□□□ -0.74
C2orf88-204ENST00000409870 KRTAP20-1Q3LI63 56 aa10.41□□□□□ -0.74
C2orf88-204ENST00000409870 SPINT4Q6UDR6 99 aa10.41□□□□□ -0.74
C2orf88-204ENST00000409870 KRTAP12-2P59991 146 aa10.41□□□□□ -0.74
C2orf88-204ENST00000409870 CDC42SE1Q9NRR8 79 aa10.39□□□□□ -0.75
C2orf88-204ENST00000409870 BRK1Q8WUW1 75 aa10.31□□□□□ -0.76
C2orf88-204ENST00000409870 KRTAP10-7P60409 375 aaPredicted RBP10.27□□□□□ -0.77
C2orf88-204ENST00000409870 KRTAP10-12P60413 245 aa10.23□□□□□ -0.77
C2orf88-204ENST00000409870 SPRR2FQ96RM1 72 aa10.22□□□□□ -0.77
C2orf88-204ENST00000409870 K7ERS5 55 aa10.21□□□□□ -0.78
C2orf88-204ENST00000409870 KRTAP8-1Q8IUC2 63 aa10.13□□□□□ -0.79
C2orf88-204ENST00000409870 SPRR2EP22531 72 aa10.12□□□□□ -0.79
C2orf88-204ENST00000409870 SPRR2BP35325 72 aa10.12□□□□□ -0.79
C2orf88-204ENST00000409870 SPRR2AP35326 72 aa10.12□□□□□ -0.79
C2orf88-204ENST00000409870 KRTAP4-8A0A0G2JLE6 195 aa10.1□□□□□ -0.79
C2orf88-204ENST00000409870 KRTAP4-8Q9BYQ9 185 aa10.1□□□□□ -0.79
C2orf88-204ENST00000409870 KRTAP2-3P0C7H8 128 aa10.07□□□□□ -0.8
C2orf88-204ENST00000409870 KRTAP2-4Q9BYR9 128 aa10.07□□□□□ -0.8
C2orf88-204ENST00000409870 PRO0628Q9UI54 55 aa10□□□□□ -0.81
C2orf88-204ENST00000409870 LCE1AQ5T7P2 110 aa9.94□□□□□ -0.82
C2orf88-204ENST00000409870 C10orf95Q9H7T3 257 aa9.93□□□□□ -0.82
C2orf88-204ENST00000409870 TNP1P09430 55 aa9.79□□□□□ -0.84
C2orf88-204ENST00000409870 SPRR2DP22532 72 aa9.79□□□□□ -0.84
C2orf88-204ENST00000409870 PMAIP1Q13794 54 aa9.77□□□□□ -0.85
C2orf88-204ENST00000409870 KRTAP2-2Q9BYT5 123 aa9.74□□□□□ -0.85
C2orf88-204ENST00000409870 KRTAP2-1Q9BYU5 128 aa9.74□□□□□ -0.85
C2orf88-204ENST00000409870 ROMO1P60602 79 aa9.64□□□□□ -0.87
C2orf88-204ENST00000409870 KRTAP19-7Q3SYF9 63 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms