RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
CHRNA1-205ENST00000409542 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
CHRNA1-205ENST00000409542 HRES1P13985 223 aa6.78□□□□□ -1.32
CHRNA1-205ENST00000409542 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
CHRNA1-205ENST00000409542 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
CHRNA1-205ENST00000409542 M0R2T5 61 aa6.76□□□□□ -1.33
CHRNA1-205ENST00000409542 PSPHP1O15172 72 aa6.76□□□□□ -1.33
CHRNA1-205ENST00000409542 A8MUN3 132 aa6.75□□□□□ -1.33
CHRNA1-205ENST00000409542 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
CHRNA1-205ENST00000409542 Q5VV11 94 aa6.73□□□□□ -1.33
CHRNA1-205ENST00000409542 DMAC1Q96GE9 116 aa6.73□□□□□ -1.33
CHRNA1-205ENST00000409542 ACYP2P14621 99 aa6.73□□□□□ -1.33
CHRNA1-205ENST00000409542 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
CHRNA1-205ENST00000409542 Q75L30 129 aa6.7□□□□□ -1.34
CHRNA1-205ENST00000409542 PRR15LQ9BU68 103 aa6.7□□□□□ -1.34
CHRNA1-205ENST00000409542 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
CHRNA1-205ENST00000409542 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
CHRNA1-205ENST00000409542 USH2AO75445 5202 aa6.66□□□□□ -1.34
CHRNA1-205ENST00000409542 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.35
CHRNA1-205ENST00000409542 IGKV2D-30A0A075B6S6 120 aa6.64□□□□□ -1.35
CHRNA1-205ENST00000409542 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
CHRNA1-205ENST00000409542 A8MUU9 505 aa6.61□□□□□ -1.35
CHRNA1-205ENST00000409542 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
CHRNA1-205ENST00000409542 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
CHRNA1-205ENST00000409542 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
CHRNA1-205ENST00000409542 A6NED7 52 aa6.56□□□□□ -1.36
CHRNA1-205ENST00000409542 FCGBPQ9Y6R7 5405 aaPredicted RBP6.55□□□□□ -1.36
CHRNA1-205ENST00000409542 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
CHRNA1-205ENST00000409542 LCA10Q71F78 164 aa6.52□□□□□ -1.37
CHRNA1-205ENST00000409542 H3BS24 57 aa6.5□□□□□ -1.37
CHRNA1-205ENST00000409542 A8MU10 97 aa6.49□□□□□ -1.37
CHRNA1-205ENST00000409542 SPINK7P58062 85 aa6.48□□□□□ -1.37
CHRNA1-205ENST00000409542 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
CHRNA1-205ENST00000409542 A0A1B0GU69 56 aa6.47□□□□□ -1.37
CHRNA1-205ENST00000409542 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
CHRNA1-205ENST00000409542 MT2AP02795 61 aa6.42□□□□□ -1.38
CHRNA1-205ENST00000409542 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
CHRNA1-205ENST00000409542 PMAIP1Q13794 54 aa6.4□□□□□ -1.39
CHRNA1-205ENST00000409542 MT1FP04733 61 aa6.38□□□□□ -1.39
CHRNA1-205ENST00000409542 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
CHRNA1-205ENST00000409542 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
CHRNA1-205ENST00000409542 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
CHRNA1-205ENST00000409542 A6NN06 94 aa6.35□□□□□ -1.39
CHRNA1-205ENST00000409542 UQCR11O14957 56 aa6.34□□□□□ -1.39
CHRNA1-205ENST00000409542 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
CHRNA1-205ENST00000409542 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
CHRNA1-205ENST00000409542 SEC61GP60059 68 aa6.32□□□□□ -1.4
CHRNA1-205ENST00000409542 MIR22HGQ0VDD5 57 aa6.31□□□□□ -1.4
CHRNA1-205ENST00000409542 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
CHRNA1-205ENST00000409542 KTN1-AS1Q86SY8 53 aa6.28□□□□□ -1.4
CHRNA1-205ENST00000409542 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
CHRNA1-205ENST00000409542 A0A1B0GU33 70 aa6.16□□□□□ -1.42
CHRNA1-205ENST00000409542 H1FX-AS1Q4G0G2 97 aa6.16□□□□□ -1.42
CHRNA1-205ENST00000409542 KRTAP6-3Q3LI67 103 aa6.15□□□□□ -1.42
CHRNA1-205ENST00000409542 H0YAA0 97 aa6.14□□□□□ -1.43
CHRNA1-205ENST00000409542 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
CHRNA1-205ENST00000409542 S4R3F8 94 aa6.11□□□□□ -1.43
CHRNA1-205ENST00000409542 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
CHRNA1-205ENST00000409542 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
CHRNA1-205ENST00000409542 NEBP20929 6669 aa5.97□□□□□ -1.45
CHRNA1-205ENST00000409542 PRAC1Q96KF2 57 aa5.96□□□□□ -1.45
CHRNA1-205ENST00000409542 ADM2Q7Z4H4 148 aa5.96□□□□□ -1.46
CHRNA1-205ENST00000409542 MUC12Q9UKN1 5478 aa5.95□□□□□ -1.46
CHRNA1-205ENST00000409542 K7ERS5 55 aa5.95□□□□□ -1.46
CHRNA1-205ENST00000409542 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
CHRNA1-205ENST00000409542 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
CHRNA1-205ENST00000409542 P0C880 135 aa5.9□□□□□ -1.46
CHRNA1-205ENST00000409542 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
CHRNA1-205ENST00000409542 A0A0D9SG42 100 aa5.82□□□□□ -1.48
CHRNA1-205ENST00000409542 M0QZ58 72 aa5.81□□□□□ -1.48
CHRNA1-205ENST00000409542 ROMO1P60602 79 aa5.77□□□□□ -1.49
CHRNA1-205ENST00000409542 MT1BP07438 61 aa5.77□□□□□ -1.49
CHRNA1-205ENST00000409542 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
CHRNA1-205ENST00000409542 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
CHRNA1-205ENST00000409542 KRTAP5-9P26371 169 aa5.72□□□□□ -1.49
CHRNA1-205ENST00000409542 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
CHRNA1-205ENST00000409542 KMT2DO14686 5537 aa5.72□□□□□ -1.49
CHRNA1-205ENST00000409542 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
CHRNA1-205ENST00000409542 KRTAP12-1P59990 96 aa5.71□□□□□ -1.49
CHRNA1-205ENST00000409542 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
CHRNA1-205ENST00000409542 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
CHRNA1-205ENST00000409542 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
CHRNA1-205ENST00000409542 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
CHRNA1-205ENST00000409542 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
CHRNA1-205ENST00000409542 R4GN34 69 aa5.64□□□□□ -1.51
CHRNA1-205ENST00000409542 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
CHRNA1-205ENST00000409542 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
CHRNA1-205ENST00000409542 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
CHRNA1-205ENST00000409542 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
CHRNA1-205ENST00000409542 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
CHRNA1-205ENST00000409542 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
CHRNA1-205ENST00000409542 SPRR2EP22531 72 aa5.48□□□□□ -1.53
CHRNA1-205ENST00000409542 SPRR2BP35325 72 aa5.48□□□□□ -1.53
CHRNA1-205ENST00000409542 SPRR2AP35326 72 aa5.48□□□□□ -1.53
CHRNA1-205ENST00000409542 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
CHRNA1-205ENST00000409542 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.53
CHRNA1-205ENST00000409542 KRTAP2-2Q9BYT5 123 aa5.42□□□□□ -1.54
CHRNA1-205ENST00000409542 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
CHRNA1-205ENST00000409542 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
CHRNA1-205ENST00000409542 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms