RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
AP1S3-204ENST00000409375 ATP5EP56381 51 aaPredicted RBP7.44□□□□□ -1.22
AP1S3-204ENST00000409375 TMEM258P61165 79 aa7.44□□□□□ -1.22
AP1S3-204ENST00000409375 LCA10Q71F78 164 aa7.43□□□□□ -1.22
AP1S3-204ENST00000409375 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
AP1S3-204ENST00000409375 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
AP1S3-204ENST00000409375 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
AP1S3-204ENST00000409375 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
AP1S3-204ENST00000409375 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
AP1S3-204ENST00000409375 COA5Q86WW8 74 aa7.33□□□□□ -1.24
AP1S3-204ENST00000409375 KRTAP10-6P60371 365 aaPredicted RBP7.32□□□□□ -1.24
AP1S3-204ENST00000409375 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
AP1S3-204ENST00000409375 H0YAA0 97 aa7.21□□□□□ -1.26
AP1S3-204ENST00000409375 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
AP1S3-204ENST00000409375 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
AP1S3-204ENST00000409375 MT2AP02795 61 aa7.15□□□□□ -1.26
AP1S3-204ENST00000409375 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
AP1S3-204ENST00000409375 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
AP1S3-204ENST00000409375 SEC61GP60059 68 aa7.09□□□□□ -1.27
AP1S3-204ENST00000409375 RPS28P62857 69 aaKnown RBP7.09□□□□□ -1.27
AP1S3-204ENST00000409375 MT1FP04733 61 aa7.08□□□□□ -1.28
AP1S3-204ENST00000409375 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
AP1S3-204ENST00000409375 A0A1B0GU69 56 aa6.98□□□□□ -1.29
AP1S3-204ENST00000409375 P0C880 135 aa6.98□□□□□ -1.29
AP1S3-204ENST00000409375 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
AP1S3-204ENST00000409375 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
AP1S3-204ENST00000409375 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
AP1S3-204ENST00000409375 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
AP1S3-204ENST00000409375 R4GN34 69 aa6.95□□□□□ -1.3
AP1S3-204ENST00000409375 V9GYY9 64 aa6.95□□□□□ -1.3
AP1S3-204ENST00000409375 Q1T7F1 81 aa6.9□□□□□ -1.3
AP1S3-204ENST00000409375 M0QZ58 72 aa6.89□□□□□ -1.31
AP1S3-204ENST00000409375 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
AP1S3-204ENST00000409375 A0A1B0GU33 70 aa6.85□□□□□ -1.31
AP1S3-204ENST00000409375 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
AP1S3-204ENST00000409375 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
AP1S3-204ENST00000409375 Q5VV11 94 aa6.79□□□□□ -1.32
AP1S3-204ENST00000409375 LCE2BO14633 110 aa6.78□□□□□ -1.32
AP1S3-204ENST00000409375 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
AP1S3-204ENST00000409375 LINC01554Q52M75 96 aa6.75□□□□□ -1.33
AP1S3-204ENST00000409375 PSPHP1O15172 72 aa6.74□□□□□ -1.33
AP1S3-204ENST00000409375 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
AP1S3-204ENST00000409375 UQCR11O14957 56 aa6.72□□□□□ -1.33
AP1S3-204ENST00000409375 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
AP1S3-204ENST00000409375 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
AP1S3-204ENST00000409375 A6NN06 94 aa6.66□□□□□ -1.34
AP1S3-204ENST00000409375 MT1BP07438 61 aa6.64□□□□□ -1.35
AP1S3-204ENST00000409375 A0A0D9SG42 100 aa6.63□□□□□ -1.35
AP1S3-204ENST00000409375 A6NED7 52 aa6.59□□□□□ -1.35
AP1S3-204ENST00000409375 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
AP1S3-204ENST00000409375 USH2AO75445 5202 aa6.55□□□□□ -1.36
AP1S3-204ENST00000409375 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
AP1S3-204ENST00000409375 A8MU10 97 aa6.53□□□□□ -1.36
AP1S3-204ENST00000409375 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
AP1S3-204ENST00000409375 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
AP1S3-204ENST00000409375 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
AP1S3-204ENST00000409375 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
AP1S3-204ENST00000409375 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
AP1S3-204ENST00000409375 K7ERS5 55 aa6.46□□□□□ -1.38
AP1S3-204ENST00000409375 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
AP1S3-204ENST00000409375 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
AP1S3-204ENST00000409375 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
AP1S3-204ENST00000409375 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
AP1S3-204ENST00000409375 SSPOA2VEC9 5147 aa6.37□□□□□ -1.39
AP1S3-204ENST00000409375 MT1XP80297 61 aa6.36□□□□□ -1.39
AP1S3-204ENST00000409375 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
AP1S3-204ENST00000409375 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
AP1S3-204ENST00000409375 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
AP1S3-204ENST00000409375 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
AP1S3-204ENST00000409375 TNP1P09430 55 aa6.11□□□□□ -1.43
AP1S3-204ENST00000409375 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
AP1S3-204ENST00000409375 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
AP1S3-204ENST00000409375 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
AP1S3-204ENST00000409375 ROMO1P60602 79 aa6.05□□□□□ -1.44
AP1S3-204ENST00000409375 PRO0628Q9UI54 55 aa6.05□□□□□ -1.44
AP1S3-204ENST00000409375 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
AP1S3-204ENST00000409375 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
AP1S3-204ENST00000409375 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
AP1S3-204ENST00000409375 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
AP1S3-204ENST00000409375 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
AP1S3-204ENST00000409375 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
AP1S3-204ENST00000409375 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
AP1S3-204ENST00000409375 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
AP1S3-204ENST00000409375 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
AP1S3-204ENST00000409375 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
AP1S3-204ENST00000409375 KMT2DO14686 5537 aa5.79□□□□□ -1.48
AP1S3-204ENST00000409375 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
AP1S3-204ENST00000409375 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
AP1S3-204ENST00000409375 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
AP1S3-204ENST00000409375 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
AP1S3-204ENST00000409375 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
AP1S3-204ENST00000409375 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
AP1S3-204ENST00000409375 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
AP1S3-204ENST00000409375 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
AP1S3-204ENST00000409375 MT1EP04732 61 aa5.61□□□□□ -1.51
AP1S3-204ENST00000409375 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
AP1S3-204ENST00000409375 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
AP1S3-204ENST00000409375 SPRR2EP22531 72 aa5.55□□□□□ -1.52
AP1S3-204ENST00000409375 SPRR2BP35325 72 aa5.55□□□□□ -1.52
AP1S3-204ENST00000409375 SPRR2AP35326 72 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 670.5 ms