RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
LSP1-203ENST00000405957 SEC61GP60059 68 aa9.02□□□□□ -0.97
LSP1-203ENST00000405957 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
LSP1-203ENST00000405957 A8MU10 97 aa8.98□□□□□ -0.97
LSP1-203ENST00000405957 UQCR11O14957 56 aa8.97□□□□□ -0.97
LSP1-203ENST00000405957 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.97
LSP1-203ENST00000405957 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
LSP1-203ENST00000405957 LPAP08519 4548 aa8.93□□□□□ -0.98
LSP1-203ENST00000405957 SPATA8Q6RVD6 105 aa8.91□□□□□ -0.98
LSP1-203ENST00000405957 MIR22HGQ0VDD5 57 aa8.88□□□□□ -0.99
LSP1-203ENST00000405957 LRP2P98164 4655 aa8.85□□□□□ -0.99
LSP1-203ENST00000405957 A6NN06 94 aa8.81□□□□□ -1
LSP1-203ENST00000405957 S4R3F8 94 aa8.73□□□□□ -1.01
LSP1-203ENST00000405957 KTN1-AS1Q86SY8 53 aa8.73□□□□□ -1.01
LSP1-203ENST00000405957 A0A1B0GU33 70 aa8.72□□□□□ -1.01
LSP1-203ENST00000405957 SEC61BP60468 96 aaKnown RBP8.71□□□□□ -1.02
LSP1-203ENST00000405957 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
LSP1-203ENST00000405957 RBM12B-AS1Q9P1G2 102 aa8.69□□□□□ -1.02
LSP1-203ENST00000405957 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
LSP1-203ENST00000405957 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.03
LSP1-203ENST00000405957 H0YAA0 97 aa8.63□□□□□ -1.03
LSP1-203ENST00000405957 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
LSP1-203ENST00000405957 KRTAP10-6P60371 365 aaPredicted RBP8.51□□□□□ -1.05
LSP1-203ENST00000405957 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
LSP1-203ENST00000405957 MUC2Q02817 5179 aa8.49□□□□□ -1.05
LSP1-203ENST00000405957 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
LSP1-203ENST00000405957 RNF213Q63HN8 5207 aa8.49□□□□□ -1.05
LSP1-203ENST00000405957 K7ERS5 55 aa8.48□□□□□ -1.05
LSP1-203ENST00000405957 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
LSP1-203ENST00000405957 ADM2Q7Z4H4 148 aa8.38□□□□□ -1.07
LSP1-203ENST00000405957 P0C880 135 aa8.35□□□□□ -1.07
LSP1-203ENST00000405957 KRTAP19-2Q3LHN2 52 aa8.33□□□□□ -1.08
LSP1-203ENST00000405957 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
LSP1-203ENST00000405957 M0QZ58 72 aa8.29□□□□□ -1.08
LSP1-203ENST00000405957 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
LSP1-203ENST00000405957 A0A0D9SG42 100 aa8.22□□□□□ -1.09
LSP1-203ENST00000405957 FAT4Q6V0I7 4981 aa8.15□□□□□ -1.1
LSP1-203ENST00000405957 ROMO1P60602 79 aa8.13□□□□□ -1.11
LSP1-203ENST00000405957 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
LSP1-203ENST00000405957 R4GN34 69 aa8.09□□□□□ -1.11
LSP1-203ENST00000405957 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
LSP1-203ENST00000405957 KRTAP12-2P59991 146 aa8.05□□□□□ -1.12
LSP1-203ENST00000405957 FLGP20930 4061 aaPredicted RBP8.04□□□□□ -1.12
LSP1-203ENST00000405957 KRTAP25-1Q3LHN0 102 aa8.02□□□□□ -1.13
LSP1-203ENST00000405957 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
LSP1-203ENST00000405957 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
LSP1-203ENST00000405957 MT1HP80294 61 aa7.98□□□□□ -1.13
LSP1-203ENST00000405957 CRIPTQ9P021 101 aa7.9□□□□□ -1.14
LSP1-203ENST00000405957 M0R2T5 61 aa7.89□□□□□ -1.15
LSP1-203ENST00000405957 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
LSP1-203ENST00000405957 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
LSP1-203ENST00000405957 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
LSP1-203ENST00000405957 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
LSP1-203ENST00000405957 C10orf95Q9H7T3 257 aa7.62□□□□□ -1.19
LSP1-203ENST00000405957 MT2AP02795 61 aa7.6□□□□□ -1.19
LSP1-203ENST00000405957 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
LSP1-203ENST00000405957 MT1FP04733 61 aa7.56□□□□□ -1.2
LSP1-203ENST00000405957 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
LSP1-203ENST00000405957 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
LSP1-203ENST00000405957 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
LSP1-203ENST00000405957 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
LSP1-203ENST00000405957 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
LSP1-203ENST00000405957 TNP1P09430 55 aa7.36□□□□□ -1.23
LSP1-203ENST00000405957 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
LSP1-203ENST00000405957 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
LSP1-203ENST00000405957 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
LSP1-203ENST00000405957 LCE2BO14633 110 aa7.23□□□□□ -1.25
LSP1-203ENST00000405957 MT1BP07438 61 aa7.22□□□□□ -1.25
LSP1-203ENST00000405957 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
LSP1-203ENST00000405957 USH2AO75445 5202 aa7.17□□□□□ -1.26
LSP1-203ENST00000405957 KRTAP9-2Q9BYQ4 174 aa7.14□□□□□ -1.27
LSP1-203ENST00000405957 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
LSP1-203ENST00000405957 MT1XP80297 61 aa7.04□□□□□ -1.28
LSP1-203ENST00000405957 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
LSP1-203ENST00000405957 SSPOA2VEC9 5147 aa7□□□□□ -1.29
LSP1-203ENST00000405957 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
LSP1-203ENST00000405957 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
LSP1-203ENST00000405957 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
LSP1-203ENST00000405957 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
LSP1-203ENST00000405957 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
LSP1-203ENST00000405957 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
LSP1-203ENST00000405957 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
LSP1-203ENST00000405957 LUZP6Q538Z0 58 aa6.77□□□□□ -1.33
LSP1-203ENST00000405957 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
LSP1-203ENST00000405957 H3BS24 57 aa6.73□□□□□ -1.33
LSP1-203ENST00000405957 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
LSP1-203ENST00000405957 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
LSP1-203ENST00000405957 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
LSP1-203ENST00000405957 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
LSP1-203ENST00000405957 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
LSP1-203ENST00000405957 KMT2DO14686 5537 aa6.41□□□□□ -1.38
LSP1-203ENST00000405957 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
LSP1-203ENST00000405957 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
LSP1-203ENST00000405957 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
LSP1-203ENST00000405957 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
LSP1-203ENST00000405957 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
LSP1-203ENST00000405957 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
LSP1-203ENST00000405957 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
LSP1-203ENST00000405957 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
LSP1-203ENST00000405957 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms