RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 A8MU10 97 aa14.76□□□□□ -0.05
CSNK1E-205ENST00000405675 SPTSSBQ8NFR3 76 aa14.75□□□□□ -0.05
CSNK1E-205ENST00000405675 HMCN2Q8NDA2 5059 aa14.74□□□□□ -0.05
CSNK1E-205ENST00000405675 SEC61BP60468 96 aaKnown RBP14.71□□□□□ -0.05
CSNK1E-205ENST00000405675 LCA10Q71F78 164 aa14.67□□□□□ -0.06
CSNK1E-205ENST00000405675 KRTAP3-3Q9BYR6 98 aa14.59□□□□□ -0.07
CSNK1E-205ENST00000405675 SVIPQ8NHG7 77 aa14.57□□□□□ -0.08
CSNK1E-205ENST00000405675 CDC42SE1Q9NRR8 79 aa14.54□□□□□ -0.08
CSNK1E-205ENST00000405675 KRTAP4-1Q9BYQ7 146 aa14.53□□□□□ -0.08
CSNK1E-205ENST00000405675 S4R3F8 94 aa14.51□□□□□ -0.09
CSNK1E-205ENST00000405675 SEC61GP60059 68 aa14.51□□□□□ -0.09
CSNK1E-205ENST00000405675 H1FX-AS1Q4G0G2 97 aa14.5□□□□□ -0.09
CSNK1E-205ENST00000405675 MUC17Q685J3 4493 aa14.49□□□□□ -0.09
CSNK1E-205ENST00000405675 RBM12B-AS1Q9P1G2 102 aa14.45□□□□□ -0.1
CSNK1E-205ENST00000405675 UQCR11O14957 56 aa14.39□□□□□ -0.11
CSNK1E-205ENST00000405675 SPATA8Q6RVD6 105 aa14.34□□□□□ -0.11
CSNK1E-205ENST00000405675 MIR22HGQ0VDD5 57 aa14.32□□□□□ -0.12
CSNK1E-205ENST00000405675 MUC2Q02817 5179 aa14.26□□□□□ -0.13
CSNK1E-205ENST00000405675 A0A1B0GU33 70 aa14.23□□□□□ -0.13
CSNK1E-205ENST00000405675 KRTAP10-6P60371 365 aaPredicted RBP14.18□□□□□ -0.14
CSNK1E-205ENST00000405675 KRTAP3-2Q9BYR7 98 aa14.18□□□□□ -0.14
CSNK1E-205ENST00000405675 H0YAA0 97 aa14.16□□□□□ -0.14
CSNK1E-205ENST00000405675 UBR4Q5T4S7 5183 aa14.14□□□□□ -0.15
CSNK1E-205ENST00000405675 PMAIP1Q13794 54 aa14.14□□□□□ -0.15
CSNK1E-205ENST00000405675 CSAG1Q6PB30 78 aa14.1□□□□□ -0.15
CSNK1E-205ENST00000405675 KRTAP19-2Q3LHN2 52 aa14.09□□□□□ -0.15
CSNK1E-205ENST00000405675 A6NN06 94 aa14.03□□□□□ -0.16
CSNK1E-205ENST00000405675 P0C880 135 aa14.03□□□□□ -0.16
CSNK1E-205ENST00000405675 ADM2Q7Z4H4 148 aa13.99□□□□□ -0.17
CSNK1E-205ENST00000405675 RNF213Q63HN8 5207 aa13.98□□□□□ -0.17
CSNK1E-205ENST00000405675 KRTAP13-4Q3LI77 160 aa13.92□□□□□ -0.18
CSNK1E-205ENST00000405675 LCE2CQ5TA81 110 aa13.79□□□□□ -0.2
CSNK1E-205ENST00000405675 FLGP20930 4061 aaPredicted RBP13.71□□□□□ -0.22
CSNK1E-205ENST00000405675 A0A0D9SG42 100 aa13.67□□□□□ -0.22
CSNK1E-205ENST00000405675 KTN1-AS1Q86SY8 53 aa13.65□□□□□ -0.22
CSNK1E-205ENST00000405675 FAT4Q6V0I7 4981 aa13.63□□□□□ -0.23
CSNK1E-205ENST00000405675 M0QZ58 72 aa13.53□□□□□ -0.24
CSNK1E-205ENST00000405675 LORP23490 312 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-205ENST00000405675 MT1HP80294 61 aa13.5□□□□□ -0.25
CSNK1E-205ENST00000405675 K7ERS5 55 aa13.46□□□□□ -0.25
CSNK1E-205ENST00000405675 M0R2T5 61 aa13.38□□□□□ -0.27
CSNK1E-205ENST00000405675 R4GN34 69 aa13.38□□□□□ -0.27
CSNK1E-205ENST00000405675 KRTAP12-2P59991 146 aa13.37□□□□□ -0.27
CSNK1E-205ENST00000405675 KRTAP12-1P59990 96 aa13.34□□□□□ -0.27
CSNK1E-205ENST00000405675 PRAC1Q96KF2 57 aa13.34□□□□□ -0.27
CSNK1E-205ENST00000405675 LINC01554Q52M75 96 aa13.28□□□□□ -0.28
CSNK1E-205ENST00000405675 SPINT4Q6UDR6 99 aa13.27□□□□□ -0.28
CSNK1E-205ENST00000405675 ROMO1P60602 79 aa13.09□□□□□ -0.31
CSNK1E-205ENST00000405675 KRTAP9-8Q9BYQ0 159 aa13□□□□□ -0.33
CSNK1E-205ENST00000405675 CRIPTQ9P021 101 aa12.99□□□□□ -0.33
CSNK1E-205ENST00000405675 LCE2AQ5TA79 106 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-205ENST00000405675 MT2AP02795 61 aa12.96□□□□□ -0.33
CSNK1E-205ENST00000405675 MT1FP04733 61 aa12.9□□□□□ -0.34
CSNK1E-205ENST00000405675 KRTAP10-10P60014 251 aa12.86□□□□□ -0.35
CSNK1E-205ENST00000405675 KRTAP25-1Q3LHN0 102 aa12.79□□□□□ -0.36
CSNK1E-205ENST00000405675 KRTAP19-1Q8IUB9 90 aa12.73□□□□□ -0.37
CSNK1E-205ENST00000405675 SPRR2GQ9BYE4 73 aa12.73□□□□□ -0.37
CSNK1E-205ENST00000405675 C10orf95Q9H7T3 257 aa12.64□□□□□ -0.39
CSNK1E-205ENST00000405675 CAMK2N1Q7Z7J9 78 aa12.6□□□□□ -0.39
CSNK1E-205ENST00000405675 KRTAP9-3Q9BYQ3 159 aa12.53□□□□□ -0.4
CSNK1E-205ENST00000405675 PLAC4Q8WY50 150 aa12.37□□□□□ -0.43
CSNK1E-205ENST00000405675 KRTAP19-8Q3LI54 63 aa12.32□□□□□ -0.44
CSNK1E-205ENST00000405675 LCE2BO14633 110 aa12.21□□□□□ -0.45
CSNK1E-205ENST00000405675 MT1BP07438 61 aa12.21□□□□□ -0.45
CSNK1E-205ENST00000405675 TNP1P09430 55 aa12.02□□□□□ -0.48
CSNK1E-205ENST00000405675 MT1XP80297 61 aa11.92□□□□□ -0.5
CSNK1E-205ENST00000405675 KRTAP10-5P60370 271 aa11.9□□□□□ -0.5
CSNK1E-205ENST00000405675 USH2AO75445 5202 aa11.88□□□□□ -0.51
CSNK1E-205ENST00000405675 PP632Q6XCG6 107 aa11.85□□□□□ -0.51
CSNK1E-205ENST00000405675 LCE2DQ5TA82 110 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-205ENST00000405675 KRTAP23-1A1A580 65 aa11.71□□□□□ -0.54
CSNK1E-205ENST00000405675 PRO2289Q9P1D8 64 aa11.59□□□□□ -0.55
CSNK1E-205ENST00000405675 FSIP2Q5CZC0 6907 aa11.58□□□□□ -0.56
CSNK1E-205ENST00000405675 LCE3AQ5TA76 89 aa11.56□□□□□ -0.56
CSNK1E-205ENST00000405675 KRTAP10-7P60409 375 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-205ENST00000405675 SSPOA2VEC9 5147 aa11.5□□□□□ -0.57
CSNK1E-205ENST00000405675 KRTAP15-1Q3LI76 137 aa11.47□□□□□ -0.57
CSNK1E-205ENST00000405675 KRTAP19-6Q3LI70 58 aa11.41□□□□□ -0.58
CSNK1E-205ENST00000405675 KRTAP10-12P60413 245 aa11.38□□□□□ -0.59
CSNK1E-205ENST00000405675 KRTAP9-2Q9BYQ4 174 aa11.38□□□□□ -0.59
CSNK1E-205ENST00000405675 KRTAP8-1Q8IUC2 63 aa11.26□□□□□ -0.61
CSNK1E-205ENST00000405675 KRTAP12-3P60328 96 aa11.03□□□□□ -0.64
CSNK1E-205ENST00000405675 FCGBPQ9Y6R7 5405 aaPredicted RBP11.03□□□□□ -0.64
CSNK1E-205ENST00000405675 KRTAP4-8A0A0G2JLE6 195 aa10.98□□□□□ -0.65
CSNK1E-205ENST00000405675 KRTAP4-8Q9BYQ9 185 aa10.98□□□□□ -0.65
CSNK1E-205ENST00000405675 KMT2DO14686 5537 aa10.97□□□□□ -0.65
CSNK1E-205ENST00000405675 CRCT1Q9UGL9 99 aa10.96□□□□□ -0.66
CSNK1E-205ENST00000405675 KRTAP19-5Q3LI72 72 aa10.88□□□□□ -0.67
CSNK1E-205ENST00000405675 SPRR5A0A1B0GTR4 108 aa10.79□□□□□ -0.68
CSNK1E-205ENST00000405675 NDUFAF8A1L188 74 aa10.79□□□□□ -0.68
CSNK1E-205ENST00000405675 KRTAP19-7Q3SYF9 63 aa10.63□□□□□ -0.71
CSNK1E-205ENST00000405675 LUZP6Q538Z0 58 aa10.55□□□□□ -0.72
CSNK1E-205ENST00000405675 MACF1Q9UPN3 7388 aaKnown RBP10.53□□□□□ -0.72
CSNK1E-205ENST00000405675 KRTAP9-6A0A140TA67 174 aa10.47□□□□□ -0.73
CSNK1E-205ENST00000405675 MT1EP04732 61 aa10.39□□□□□ -0.75
CSNK1E-205ENST00000405675 LCE3CQ5T5A8 94 aa10.34□□□□□ -0.75
CSNK1E-205ENST00000405675 SYNE2Q8WXH0 6885 aaKnown RBP10.27□□□□□ -0.77
CSNK1E-205ENST00000405675 MT1LQ93083 61 aa10.25□□□□□ -0.77
CSNK1E-205ENST00000405675 H3BS24 57 aa10.19□□□□□ -0.78
CSNK1E-205ENST00000405675 SPRR2FQ96RM1 72 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms